RNA–Protein interactions for RNA: ENST00000502559.1

SH3TC1-205, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 2

Gene SH3TC1, Length 3,798 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-205ENST00000502559 TMC1Q8TDI8 760 aa17.33■□□□□ 0.36
SH3TC1-205ENST00000502559 DDRGK1Q96HY6 314 aa17.33■□□□□ 0.36
SH3TC1-205ENST00000502559 KIF7Q2M1P5 1343 aa17.32■□□□□ 0.36
SH3TC1-205ENST00000502559 AQRO60306 1485 aaKnown RBP eCLIP17.31■□□□□ 0.369e-7■■■■■ 31.4
SH3TC1-205ENST00000502559 RRP1P56182 461 aaKnown RBP17.3■□□□□ 0.36
SH3TC1-205ENST00000502559 NCOA2Q15596 1464 aa17.3■□□□□ 0.36
SH3TC1-205ENST00000502559 FRAT2O75474 233 aaPredicted RBP17.29■□□□□ 0.36
SH3TC1-205ENST00000502559 DCAF11Q8TEB1 546 aa17.29■□□□□ 0.36
SH3TC1-205ENST00000502559 FGD5Q6ZNL6 1462 aa17.27■□□□□ 0.36
SH3TC1-205ENST00000502559 VSIG10Q8N0Z9 540 aa17.27■□□□□ 0.36
SH3TC1-205ENST00000502559 PTPRKQ15262 1439 aa17.27■□□□□ 0.36
SH3TC1-205ENST00000502559 ARXQ96QS3 562 aa17.27■□□□□ 0.36
SH3TC1-205ENST00000502559 NCOA1Q15788 1441 aa17.26■□□□□ 0.35
SH3TC1-205ENST00000502559 MS4A1P11836 297 aa17.26■□□□□ 0.35
SH3TC1-205ENST00000502559 ARID3CA6NKF2 412 aa17.26■□□□□ 0.35
SH3TC1-205ENST00000502559 RCAN3Q9UKA8 241 aa17.26■□□□□ 0.35
SH3TC1-205ENST00000502559 PLIN1O60240 522 aa17.26■□□□□ 0.35
SH3TC1-205ENST00000502559 ZNF326Q5BKZ1 582 aaKnown RBP17.26■□□□□ 0.35
SH3TC1-205ENST00000502559 AEBP2Q6ZN18 517 aaPredicted RBP17.25■□□□□ 0.35
SH3TC1-205ENST00000502559 FAM43AQ8N2R8 423 aa17.25■□□□□ 0.35
SH3TC1-205ENST00000502559 MAP3K1Q13233 1512 aa17.25■□□□□ 0.35
SH3TC1-205ENST00000502559 NBPF8Q3BBV2 869 aa17.25■□□□□ 0.35
SH3TC1-205ENST00000502559 GLIPR1L2Q4G1C9 344 aa17.25■□□□□ 0.35
SH3TC1-205ENST00000502559 KDM5BQ9UGL1 1544 aa17.24■□□□□ 0.35
SH3TC1-205ENST00000502559 CARMIL1Q5VZK9 1371 aa17.23■□□□□ 0.35
SH3TC1-205ENST00000502559 PDS5BQ9NTI5 1447 aa17.23■□□□□ 0.35
SH3TC1-205ENST00000502559 RAD54L2Q9Y4B4 1467 aa17.23■□□□□ 0.35
SH3TC1-205ENST00000502559 HFM1A2PYH4 1435 aa17.23■□□□□ 0.35
SH3TC1-205ENST00000502559 FGD6Q6ZV73 1430 aa17.22■□□□□ 0.35
SH3TC1-205ENST00000502559 PNISRQ8TF01 805 aaKnown RBP17.22■□□□□ 0.35
SH3TC1-205ENST00000502559 FHOD3Q2V2M9 1422 aa17.21■□□□□ 0.35
SH3TC1-205ENST00000502559 IGF1RP08069 1367 aa17.21■□□□□ 0.35
SH3TC1-205ENST00000502559 TDRD9Q8NDG6 1382 aaKnown RBP17.21■□□□□ 0.35
SH3TC1-205ENST00000502559 NAIPQ13075 1403 aa17.21■□□□□ 0.35
SH3TC1-205ENST00000502559 MTUS2Q5JR59 1369 aa17.21■□□□□ 0.35
SH3TC1-205ENST00000502559 CHMP7Q8WUX9 453 aaPredicted RBP17.2■□□□□ 0.34
SH3TC1-205ENST00000502559 FMN1Q68DA7 1419 aa17.2■□□□□ 0.34
SH3TC1-205ENST00000502559 BIVM-ERCC5R4GMW8 1640 aa17.19■□□□□ 0.34
SH3TC1-205ENST00000502559 ZMYND15Q9H091 742 aa17.19■□□□□ 0.34
SH3TC1-205ENST00000502559 MPHOSPH9Q99550 1183 aa17.18■□□□□ 0.34
SH3TC1-205ENST00000502559 NAP1L5Q96NT1 182 aaPredicted RBP17.16■□□□□ 0.34
SH3TC1-205ENST00000502559 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.15■□□□□ 0.34
SH3TC1-205ENST00000502559 PCF11O94913 1555 aaKnown RBP17.15■□□□□ 0.34
SH3TC1-205ENST00000502559 RRAGDQ9NQL2 400 aaPredicted RBP17.15■□□□□ 0.34
SH3TC1-205ENST00000502559 PTPN23Q9H3S7 1636 aa17.15■□□□□ 0.34
SH3TC1-205ENST00000502559 CDCA7LQ96GN5 454 aa17.14■□□□□ 0.33
SH3TC1-205ENST00000502559 CRBNQ96SW2 442 aa17.14■□□□□ 0.33
SH3TC1-205ENST00000502559 TOPBP1Q92547 1522 aa17.13■□□□□ 0.33
SH3TC1-205ENST00000502559 POGKQ9P215 609 aa17.12■□□□□ 0.33
SH3TC1-205ENST00000502559 TULP1O00294 542 aaPredicted RBP17.11■□□□□ 0.33
SH3TC1-205ENST00000502559 RGS3P49796 1198 aa17.11■□□□□ 0.33
SH3TC1-205ENST00000502559 DHX29Q7Z478 1369 aaKnown RBP17.1■□□□□ 0.33
SH3TC1-205ENST00000502559 POLA1P09884 1462 aaPredicted RBP17.1■□□□□ 0.33
SH3TC1-205ENST00000502559 HSP90AA2PQ14568 343 aaPredicted RBP17.09■□□□□ 0.33
SH3TC1-205ENST00000502559 SLKQ9H2G2 1235 aaPredicted RBP17.05■□□□□ 0.32
SH3TC1-205ENST00000502559 LAMC3Q9Y6N6 1575 aa17.05■□□□□ 0.32
SH3TC1-205ENST00000502559 ARID4BQ4LE39 1312 aaPredicted RBP17.05■□□□□ 0.32
SH3TC1-205ENST00000502559 C20orf194Q5TEA3 1177 aa17.05■□□□□ 0.32
SH3TC1-205ENST00000502559 FAM161AQ3B820 660 aa17.04■□□□□ 0.32
SH3TC1-205ENST00000502559 PNNQ9H307 717 aaKnown RBP17.04■□□□□ 0.32
SH3TC1-205ENST00000502559 DNMBPQ6XZF7 1577 aa17.04■□□□□ 0.32
SH3TC1-205ENST00000502559 SLC4A1APQ9BWU0 796 aaKnown RBP17.04■□□□□ 0.32
SH3TC1-205ENST00000502559 CFAP43Q8NDM7 1665 aa17.03■□□□□ 0.32
SH3TC1-205ENST00000502559 URB2Q14146 1524 aaKnown RBP17.03■□□□□ 0.32
SH3TC1-205ENST00000502559 HSP90AA1P07900 732 aaKnown RBP17.03■□□□□ 0.32
SH3TC1-205ENST00000502559 TRHP20396 242 aaPredicted RBP17.02■□□□□ 0.32
SH3TC1-205ENST00000502559 DENND4BO75064 1496 aaPredicted RBP17.02■□□□□ 0.31
SH3TC1-205ENST00000502559 SPATA31E1Q6ZUB1 1445 aa17.01■□□□□ 0.31
SH3TC1-205ENST00000502559 CASKIN1Q8WXD9 1431 aa17■□□□□ 0.31
SH3TC1-205ENST00000502559 C8orf34Q49A92 452 aa17■□□□□ 0.31
SH3TC1-205ENST00000502559 FYCO1Q9BQS8 1478 aa16.99■□□□□ 0.31
SH3TC1-205ENST00000502559 USP47Q96K76 1375 aa16.99■□□□□ 0.31
SH3TC1-205ENST00000502559 GZF1Q9H116 711 aaPredicted RBP16.99■□□□□ 0.31
SH3TC1-205ENST00000502559 MYOM3Q5VTT5 1437 aa16.99■□□□□ 0.31
SH3TC1-205ENST00000502559 L1TD1Q5T7N2 865 aaKnown RBP16.97■□□□□ 0.31
SH3TC1-205ENST00000502559 MYBBP1AQ9BQG0 1328 aaKnown RBP16.97■□□□□ 0.31
SH3TC1-205ENST00000502559 NPM1P06748 294 aaKnown RBP eCLIP16.96■□□□□ 0.31
SH3TC1-205ENST00000502559 PDE3BQ13370 1112 aa16.96■□□□□ 0.31
SH3TC1-205ENST00000502559 ABCA10Q8WWZ4 1543 aa16.95■□□□□ 0.3
SH3TC1-205ENST00000502559 GAPVD1Q14C86 1478 aa16.95■□□□□ 0.3
SH3TC1-205ENST00000502559 PRDM2Q13029 1718 aa16.95■□□□□ 0.3
SH3TC1-205ENST00000502559 KTN1Q86UP2 1357 aaKnown RBP16.95■□□□□ 0.3
SH3TC1-205ENST00000502559 CENPQQ7L2Z9 268 aaPredicted RBP16.94■□□□□ 0.3
SH3TC1-205ENST00000502559 LRPPRCP42704 1394 aaKnown RBP16.94■□□□□ 0.3
SH3TC1-205ENST00000502559 PANK2Q9BZ23 570 aa16.93■□□□□ 0.3
SH3TC1-205ENST00000502559 KIF15Q9NS87 1388 aa16.93■□□□□ 0.3
SH3TC1-205ENST00000502559 ANKRD30BQ9BXX2 1392 aa16.93■□□□□ 0.3
SH3TC1-205ENST00000502559 RRP9O43818 475 aaKnown RBP16.92■□□□□ 0.3
SH3TC1-205ENST00000502559 SPRYD3Q8NCJ5 442 aa16.92■□□□□ 0.3
SH3TC1-205ENST00000502559 CARD11Q9BXL7 1154 aa16.92■□□□□ 0.3
SH3TC1-205ENST00000502559 BRD4O60885 1362 aaPredicted RBP16.92■□□□□ 0.3
SH3TC1-205ENST00000502559 KDM2AQ9Y2K7 1162 aa16.91■□□□□ 0.3
SH3TC1-205ENST00000502559 RALBP1Q15311 655 aa16.91■□□□□ 0.3
SH3TC1-205ENST00000502559 XRCC6P12956 609 aaKnown RBP eCLIP16.9■□□□□ 0.3
SH3TC1-205ENST00000502559 KDM6BO15054 1643 aa16.9■□□□□ 0.3
SH3TC1-205ENST00000502559 GOLGA6L3A6NEY3 463 aa16.9■□□□□ 0.3
SH3TC1-205ENST00000502559 KDM2BQ8NHM5 1336 aa16.9■□□□□ 0.3
SH3TC1-205ENST00000502559 RPRD2Q5VT52 1461 aaKnown RBP16.9■□□□□ 0.3
SH3TC1-205ENST00000502559 PDIA4P13667 645 aaKnown RBP16.89■□□□□ 0.3
SH3TC1-205ENST00000502559 ST20-MTHFSA0A0A6YYL1 179 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms