RNA–Protein interactions for RNA: ENST00000490692.1

PCSK9-202, Transcript of proprotein convertase subtilisin/kexin type 9, humanhuman

TSL 2

Gene PCSK9, Length 3,891 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK9-202ENST00000490692 RCAN3Q9UKA8 241 aa15.08■□□□□ 0.01
PCSK9-202ENST00000490692 SLC4A1APQ9BWU0 796 aaKnown RBP15.08■□□□□ 0
PCSK9-202ENST00000490692 RSPH6AQ9H0K4 717 aa15.08■□□□□ 0
PCSK9-202ENST00000490692 ARHGAP35Q9NRY4 1499 aa15.07■□□□□ 0
PCSK9-202ENST00000490692 WASHC2AQ641Q2 1341 aa15.07■□□□□ 0
PCSK9-202ENST00000490692 PDE4CQ08493 712 aa15.07■□□□□ 0
PCSK9-202ENST00000490692 PNNQ9H307 717 aaKnown RBP15.06■□□□□ 0
PCSK9-202ENST00000490692 UPF2Q9HAU5 1272 aaKnown RBP15.06■□□□□ 0
PCSK9-202ENST00000490692 SKAP1Q86WV1 359 aa15.06■□□□□ 0
PCSK9-202ENST00000490692 FHOD3Q2V2M9 1422 aa15.05■□□□□ -0
PCSK9-202ENST00000490692 HSP90AA1P07900 732 aaKnown RBP15.04■□□□□ -0
PCSK9-202ENST00000490692 ARID3AQ99856 593 aa15.04■□□□□ -0
PCSK9-202ENST00000490692 L3MBTL2Q969R5 705 aa15.04■□□□□ -0
PCSK9-202ENST00000490692 TRIM44Q96DX7 344 aaPredicted RBP15.04■□□□□ -0
PCSK9-202ENST00000490692 ZNF777Q9ULD5 760 aaPredicted RBP15.04■□□□□ -0
PCSK9-202ENST00000490692 HSP90AA2PQ14568 343 aaPredicted RBP15.02■□□□□ -0
PCSK9-202ENST00000490692 ZMYND15Q9H091 742 aa15.02■□□□□ -0
PCSK9-202ENST00000490692 BECN1Q14457 450 aa15.02□□□□□ -0.01
PCSK9-202ENST00000490692 FRAT2O75474 233 aaPredicted RBP15□□□□□ -0.01
PCSK9-202ENST00000490692 POLA1P09884 1462 aaPredicted RBP15□□□□□ -0.01
PCSK9-202ENST00000490692 TOPBP1Q92547 1522 aa14.99□□□□□ -0.01
PCSK9-202ENST00000490692 RRP1P56182 461 aaKnown RBP14.98□□□□□ -0.01
PCSK9-202ENST00000490692 AEBP2Q6ZN18 517 aaPredicted RBP14.98□□□□□ -0.01
PCSK9-202ENST00000490692 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.97□□□□□ -0.01
PCSK9-202ENST00000490692 ANP32BQ92688 251 aaKnown RBP14.97□□□□□ -0.01
PCSK9-202ENST00000490692 CC2D1BQ5T0F9 858 aaKnown RBP14.96□□□□□ -0.01
PCSK9-202ENST00000490692 PDS5BQ9NTI5 1447 aa14.96□□□□□ -0.01
PCSK9-202ENST00000490692 CARD11Q9BXL7 1154 aa14.94□□□□□ -0.02
PCSK9-202ENST00000490692 WDR43Q15061 677 aaKnown RBP eCLIP14.94□□□□□ -0.02
PCSK9-202ENST00000490692 L1TD1Q5T7N2 865 aaKnown RBP14.94□□□□□ -0.02
PCSK9-202ENST00000490692 RRBP1Q9P2E9 1410 aaKnown RBP14.93□□□□□ -0.02
PCSK9-202ENST00000490692 CRBNQ96SW2 442 aa14.93□□□□□ -0.02
PCSK9-202ENST00000490692 BACH2Q9BYV9 841 aa14.93□□□□□ -0.02
PCSK9-202ENST00000490692 PHLDB1Q86UU1 1377 aa14.93□□□□□ -0.02
PCSK9-202ENST00000490692 FHAD1B1AJZ9 1412 aa14.92□□□□□ -0.02
PCSK9-202ENST00000490692 ERCC6Q03468 1493 aa14.92□□□□□ -0.02
PCSK9-202ENST00000490692 DNMBPQ6XZF7 1577 aa14.9□□□□□ -0.02
PCSK9-202ENST00000490692 PDIA4P13667 645 aaKnown RBP14.9□□□□□ -0.02
PCSK9-202ENST00000490692 MPHOSPH9Q99550 1183 aa14.89□□□□□ -0.03
PCSK9-202ENST00000490692 URB2Q14146 1524 aaKnown RBP14.89□□□□□ -0.03
PCSK9-202ENST00000490692 C11orf95C9JLR9 678 aaPredicted RBP14.88□□□□□ -0.03
PCSK9-202ENST00000490692 GOLGA6L3A6NEY3 463 aa14.88□□□□□ -0.03
PCSK9-202ENST00000490692 ZBTB7CA1YPR0 619 aa14.88□□□□□ -0.03
PCSK9-202ENST00000490692 MS4A1P11836 297 aa14.87□□□□□ -0.03
PCSK9-202ENST00000490692 GAPVD1Q14C86 1478 aa14.87□□□□□ -0.03
PCSK9-202ENST00000490692 KIF7Q2M1P5 1343 aa14.87□□□□□ -0.03
PCSK9-202ENST00000490692 CCDC7Q96M83 1385 aa14.87□□□□□ -0.03
PCSK9-202ENST00000490692 CNTLNQ9NXG0 1405 aa14.87□□□□□ -0.03
PCSK9-202ENST00000490692 RGL3Q3MIN7 710 aa14.87□□□□□ -0.03
PCSK9-202ENST00000490692 CHMP7Q8WUX9 453 aaPredicted RBP14.86□□□□□ -0.03
PCSK9-202ENST00000490692 CDCA7LQ96GN5 454 aa14.86□□□□□ -0.03
PCSK9-202ENST00000490692 AQRO60306 1485 aaKnown RBP eCLIP14.86□□□□□ -0.031e-7■■■■■ 39.2
PCSK9-202ENST00000490692 ABCA10Q8WWZ4 1543 aa14.85□□□□□ -0.03
PCSK9-202ENST00000490692 BCL11BQ9C0K0 894 aaPredicted RBP14.85□□□□□ -0.03
PCSK9-202ENST00000490692 FAM43AQ8N2R8 423 aa14.85□□□□□ -0.03
PCSK9-202ENST00000490692 NCLP19338 710 aaKnown RBP14.84□□□□□ -0.03
PCSK9-202ENST00000490692 FAM161AQ3B820 660 aa14.84□□□□□ -0.03
PCSK9-202ENST00000490692 LRRC9Q6ZRR7 1453 aa14.84□□□□□ -0.03
PCSK9-202ENST00000490692 NEUROD2Q15784 382 aa14.84□□□□□ -0.03
PCSK9-202ENST00000490692 PRDM2Q13029 1718 aa14.83□□□□□ -0.03
PCSK9-202ENST00000490692 CCDC18Q5T9S5 1454 aa14.82□□□□□ -0.04
PCSK9-202ENST00000490692 POGKQ9P215 609 aa14.82□□□□□ -0.04
PCSK9-202ENST00000490692 TIAM1Q13009 1591 aa14.8□□□□□ -0.04
PCSK9-202ENST00000490692 MAPKBP1O60336 1514 aa14.8□□□□□ -0.04
PCSK9-202ENST00000490692 RBM10P98175 930 aaKnown RBP14.8□□□□□ -0.04
PCSK9-202ENST00000490692 MYH16Q9H6N6 1097 aa14.8□□□□□ -0.04
PCSK9-202ENST00000490692 FMN1Q68DA7 1419 aa14.79□□□□□ -0.04
PCSK9-202ENST00000490692 AMER1Q5JTC6 1135 aaPredicted RBP14.79□□□□□ -0.04
PCSK9-202ENST00000490692 PCF11O94913 1555 aaKnown RBP14.78□□□□□ -0.04
PCSK9-202ENST00000490692 LAMC3Q9Y6N6 1575 aa14.78□□□□□ -0.04
PCSK9-202ENST00000490692 SMG6Q86US8 1419 aaKnown RBP14.77□□□□□ -0.05
PCSK9-202ENST00000490692 DCAF11Q8TEB1 546 aa14.76□□□□□ -0.05
PCSK9-202ENST00000490692 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.76□□□□□ -0.05
PCSK9-202ENST00000490692 NBPF8Q3BBV2 869 aa14.75□□□□□ -0.05
PCSK9-202ENST00000490692 TPRNQ4KMQ1 711 aa14.74□□□□□ -0.05
PCSK9-202ENST00000490692 CENPQQ7L2Z9 268 aaPredicted RBP14.74□□□□□ -0.05
PCSK9-202ENST00000490692 PNISRQ8TF01 805 aaKnown RBP14.73□□□□□ -0.05
PCSK9-202ENST00000490692 ST20-MTHFSA0A0A6YYL1 179 aa14.73□□□□□ -0.05
PCSK9-202ENST00000490692 DNTTIP2Q5QJE6 756 aaKnown RBP14.73□□□□□ -0.05
PCSK9-202ENST00000490692 FOXD4L1Q9NU39 408 aa14.73□□□□□ -0.05
PCSK9-202ENST00000490692 WASHC2CQ9Y4E1 1318 aa14.73□□□□□ -0.05
PCSK9-202ENST00000490692 MSNP26038 577 aaKnown RBP14.72□□□□□ -0.05
PCSK9-202ENST00000490692 NLRP13Q86W25 1043 aa14.72□□□□□ -0.05
PCSK9-202ENST00000490692 CASKIN1Q8WXD9 1431 aa14.72□□□□□ -0.05
PCSK9-202ENST00000490692 FGD1P98174 961 aa14.71□□□□□ -0.05
PCSK9-202ENST00000490692 MFAP1P55081 439 aaKnown RBP14.71□□□□□ -0.05
PCSK9-202ENST00000490692 RALBP1Q15311 655 aa14.71□□□□□ -0.05
PCSK9-202ENST00000490692 PDE3BQ13370 1112 aa14.7□□□□□ -0.06
PCSK9-202ENST00000490692 CCDC146Q8IYE0 955 aa14.7□□□□□ -0.06
PCSK9-202ENST00000490692 MYBBP1AQ9BQG0 1328 aaKnown RBP14.7□□□□□ -0.06
PCSK9-202ENST00000490692 KTN1Q86UP2 1357 aaKnown RBP14.7□□□□□ -0.06
PCSK9-202ENST00000490692 UACAQ9BZF9 1416 aa14.7□□□□□ -0.06
PCSK9-202ENST00000490692 PKD2Q13563 968 aa14.7□□□□□ -0.06
PCSK9-202ENST00000490692 KLHL34Q8N239 644 aa14.7□□□□□ -0.06
PCSK9-202ENST00000490692 FAM13BQ9NYF5 915 aa14.7□□□□□ -0.06
PCSK9-202ENST00000490692 KIF21AQ7Z4S6 1674 aa14.7□□□□□ -0.06
PCSK9-202ENST00000490692 HSP90AB1P08238 724 aaKnown RBP14.69□□□□□ -0.06
PCSK9-202ENST00000490692 KNSTRNQ9Y448 316 aa14.69□□□□□ -0.06
PCSK9-202ENST00000490692 C20orf194Q5TEA3 1177 aa14.68□□□□□ -0.06
PCSK9-202ENST00000490692 HSCBQ8IWL3 235 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms