RNA–Protein interactions for RNA: ENST00000489194.5

NVL-220, Transcript of nuclear VCP-like, humanhuman

TSL 3

Gene NVL, Length 692 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NVL-220ENST00000489194 SYNJ1O43426 1573 aa13.48□□□□□ -0.25
NVL-220ENST00000489194 LAMC3Q9Y6N6 1575 aa13.48□□□□□ -0.25
NVL-220ENST00000489194 FAM9AQ8IZU1 332 aaPredicted RBP13.46□□□□□ -0.25
NVL-220ENST00000489194 MKRN3Q13064 507 aaKnown RBP13.44□□□□□ -0.26
NVL-220ENST00000489194 LOC105371045A0A1W2PR82 267 aa13.43□□□□□ -0.26
NVL-220ENST00000489194 GOLGA2Q08379 1002 aa13.43□□□□□ -0.26
NVL-220ENST00000489194 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.39□□□□□ -0.27
NVL-220ENST00000489194 FANCD2Q9BXW9 1451 aa13.39□□□□□ -0.27
NVL-220ENST00000489194 ZNF467Q7Z7K2 595 aaPredicted RBP13.38□□□□□ -0.27
NVL-220ENST00000489194 CUX1P39880 1505 aa13.37□□□□□ -0.27
NVL-220ENST00000489194 SOGA1O94964 1423 aa13.37□□□□□ -0.27
NVL-220ENST00000489194 PDS5BQ9NTI5 1447 aa13.37□□□□□ -0.27
NVL-220ENST00000489194 CEP164Q9UPV0 1460 aa13.34□□□□□ -0.27
NVL-220ENST00000489194 DNMBPQ6XZF7 1577 aa13.32□□□□□ -0.28
NVL-220ENST00000489194 KIF21BO75037 1637 aa13.32□□□□□ -0.28
NVL-220ENST00000489194 GOLGA3Q08378 1498 aa13.31□□□□□ -0.28
NVL-220ENST00000489194 KIF27Q86VH2 1401 aa13.3□□□□□ -0.28
NVL-220ENST00000489194 HOXB3P14651 431 aaPredicted RBP13.3□□□□□ -0.28
NVL-220ENST00000489194 PSEN1P49768 467 aa13.29□□□□□ -0.28
NVL-220ENST00000489194 DPY19L2Q6NUT2 758 aa13.29□□□□□ -0.28
NVL-220ENST00000489194 ILDR1Q86SU0 546 aaPredicted RBP13.29□□□□□ -0.28
NVL-220ENST00000489194 NESP48681 1621 aa13.28□□□□□ -0.28
NVL-220ENST00000489194 FKBP8Q14318 412 aa13.27□□□□□ -0.29
NVL-220ENST00000489194 TNIKQ9UKE5 1360 aa13.27□□□□□ -0.29
NVL-220ENST00000489194 GSE1Q14687 1217 aa13.26□□□□□ -0.29
NVL-220ENST00000489194 RUSC2Q8N2Y8 1516 aa13.26□□□□□ -0.29
NVL-220ENST00000489194 RNF166Q96A37 237 aaPredicted RBP13.25□□□□□ -0.29
NVL-220ENST00000489194 TOPBP1Q92547 1522 aa13.24□□□□□ -0.29
NVL-220ENST00000489194 FGD5Q6ZNL6 1462 aa13.24□□□□□ -0.29
NVL-220ENST00000489194 HOXB1P14653 301 aaPredicted RBP13.24□□□□□ -0.29
NVL-220ENST00000489194 UBTFP17480 764 aaKnown RBP13.24□□□□□ -0.29
NVL-220ENST00000489194 ERICH3Q5RHP9 1530 aa13.23□□□□□ -0.29
NVL-220ENST00000489194 KIF21AQ7Z4S6 1674 aa13.22□□□□□ -0.29
NVL-220ENST00000489194 CHRM1P11229 460 aaPredicted RBP13.22□□□□□ -0.29
NVL-220ENST00000489194 ZNF710Q8N1W2 664 aa13.22□□□□□ -0.29
NVL-220ENST00000489194 BOLA1Q9Y3E2 137 aa13.22□□□□□ -0.29
NVL-220ENST00000489194 ERBB3P21860 1342 aa13.21□□□□□ -0.29
NVL-220ENST00000489194 CUX2O14529 1486 aa13.19□□□□□ -0.3
NVL-220ENST00000489194 G3V3G9 751 aa13.19□□□□□ -0.3
NVL-220ENST00000489194 ABCA10Q8WWZ4 1543 aa13.17□□□□□ -0.3
NVL-220ENST00000489194 POLA1P09884 1462 aaPredicted RBP13.16□□□□□ -0.3
NVL-220ENST00000489194 PRXQ9BXM0 1461 aa13.16□□□□□ -0.3
NVL-220ENST00000489194 CEP162Q5TB80 1403 aa13.16□□□□□ -0.3
NVL-220ENST00000489194 PDAP1Q13442 181 aaKnown RBP13.16□□□□□ -0.3
NVL-220ENST00000489194 DOK7Q18PE1 504 aa13.16□□□□□ -0.3
NVL-220ENST00000489194 KLHL34Q8N239 644 aa13.16□□□□□ -0.3
NVL-220ENST00000489194 URB2Q14146 1524 aaKnown RBP13.16□□□□□ -0.3
NVL-220ENST00000489194 CABP2Q9NPB3 220 aa13.15□□□□□ -0.3
NVL-220ENST00000489194 FBXO3Q9UK99 471 aa13.15□□□□□ -0.3
NVL-220ENST00000489194 MRC2Q9UBG0 1479 aa13.15□□□□□ -0.3
NVL-220ENST00000489194 MYT1LQ9UL68 1186 aa13.14□□□□□ -0.31
NVL-220ENST00000489194 VARS2Q5ST30 1063 aaKnown RBP13.13□□□□□ -0.31
NVL-220ENST00000489194 RAPGEF2Q9Y4G8 1499 aa13.11□□□□□ -0.31
NVL-220ENST00000489194 WDR97A6NE52 1622 aa13.11□□□□□ -0.31
NVL-220ENST00000489194 CUL7Q14999 1698 aa13.11□□□□□ -0.31
NVL-220ENST00000489194 ERCC6Q03468 1493 aa13.09□□□□□ -0.31
NVL-220ENST00000489194 IGF1RP08069 1367 aa13.08□□□□□ -0.31
NVL-220ENST00000489194 CARMIL1Q5VZK9 1371 aa13.07□□□□□ -0.32
NVL-220ENST00000489194 CLIP1P30622 1438 aa13.07□□□□□ -0.32
NVL-220ENST00000489194 RIMBP2O15034 1052 aa13.07□□□□□ -0.32
NVL-220ENST00000489194 RAD54L2Q9Y4B4 1467 aa13.07□□□□□ -0.32
NVL-220ENST00000489194 VASPP50552 380 aaPredicted RBP13.06□□□□□ -0.32
NVL-220ENST00000489194 TRIM26Q12899 539 aaPredicted RBP13.06□□□□□ -0.32
NVL-220ENST00000489194 WDR62O43379 1518 aa13.06□□□□□ -0.32
NVL-220ENST00000489194 ABCA5Q8WWZ7 1642 aa13.04□□□□□ -0.32
NVL-220ENST00000489194 TARBP1Q13395 1621 aaKnown RBP13.03□□□□□ -0.32
NVL-220ENST00000489194 GAPVD1Q14C86 1478 aa13.03□□□□□ -0.32
NVL-220ENST00000489194 IFT140Q96RY7 1462 aa13.03□□□□□ -0.32
NVL-220ENST00000489194 ZNF687Q8N1G0 1237 aa13.02□□□□□ -0.33
NVL-220ENST00000489194 VPS8Q8N3P4 1428 aa12.98□□□□□ -0.33
NVL-220ENST00000489194 PBRM1Q86U86 1689 aa12.97□□□□□ -0.33
NVL-220ENST00000489194 PCGF6Q9BYE7 350 aa12.97□□□□□ -0.33
NVL-220ENST00000489194 ZSWIM6Q9HCJ5 1215 aa12.97□□□□□ -0.33
NVL-220ENST00000489194 THOC2Q8NI27 1593 aaKnown RBP12.97□□□□□ -0.33
NVL-220ENST00000489194 TDRD9Q8NDG6 1382 aaKnown RBP12.96□□□□□ -0.33
NVL-220ENST00000489194 CTTNBP2Q8WZ74 1663 aa12.96□□□□□ -0.33
NVL-220ENST00000489194 PTGER2P43116 358 aa12.96□□□□□ -0.33
NVL-220ENST00000489194 TMEM92Q6UXU6 159 aa12.96□□□□□ -0.33
NVL-220ENST00000489194 GRIN2BQ13224 1484 aa12.94□□□□□ -0.34
NVL-220ENST00000489194 GPR153Q6NV75 609 aa12.94□□□□□ -0.34
NVL-220ENST00000489194 EFCAB3Q8N7B9 438 aa12.92□□□□□ -0.34
NVL-220ENST00000489194 CIZ1Q9ULV3 898 aaPredicted RBP12.92□□□□□ -0.34
NVL-220ENST00000489194 FHAD1B1AJZ9 1412 aa12.91□□□□□ -0.34
NVL-220ENST00000489194 MICALL2Q8IY33 904 aa12.91□□□□□ -0.34
NVL-220ENST00000489194 EFCAB5A4FU69 1503 aa12.9□□□□□ -0.34
NVL-220ENST00000489194 ANKRD13DQ6ZTN6 518 aa12.89□□□□□ -0.35
NVL-220ENST00000489194 RANGAP1P46060 587 aaPredicted RBP12.87□□□□□ -0.35
NVL-220ENST00000489194 ADAMTS12P58397 1594 aa12.86□□□□□ -0.35
NVL-220ENST00000489194 ARAP1Q96P48 1450 aa12.86□□□□□ -0.35
NVL-220ENST00000489194 ARHGAP35Q9NRY4 1499 aa12.86□□□□□ -0.35
NVL-220ENST00000489194 AQRO60306 1485 aaKnown RBP eCLIP12.85□□□□□ -0.35
NVL-220ENST00000489194 EIF4G3O43432 1585 aaKnown RBP12.85□□□□□ -0.35
NVL-220ENST00000489194 SPOCK2Q92563 424 aa12.84□□□□□ -0.35
NVL-220ENST00000489194 MAGI1Q96QZ7 1491 aaPredicted RBP12.84□□□□□ -0.35
NVL-220ENST00000489194 ARSIQ5FYB1 569 aa12.83□□□□□ -0.36
NVL-220ENST00000489194 ZNF608Q9ULD9 1512 aaPredicted RBP12.81□□□□□ -0.36
NVL-220ENST00000489194 MAP3K1Q13233 1512 aa12.8□□□□□ -0.36
NVL-220ENST00000489194 LSM11P83369 360 aaKnown RBP eCLIP12.8□□□□□ -0.36
NVL-220ENST00000489194 FMN1Q68DA7 1419 aa12.79□□□□□ -0.36
NVL-220ENST00000489194 ZNF316A6NFI3 1004 aaPredicted RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms