RNA–Protein interactions for RNA: ENST00000489194.5

NVL-220, Transcript of nuclear VCP-like, humanhuman

TSL 3

Gene NVL, Length 692 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NVL-220ENST00000489194 AEBP2Q6ZN18 517 aaPredicted RBP30.37■■■□□ 2.45
NVL-220ENST00000489194 CHIC1Q5VXU3 224 aa28.34■■■□□ 2.13
NVL-220ENST00000489194 SENP3Q9H4L4 574 aaPredicted RBP25.97■■□□□ 1.75
NVL-220ENST00000489194 PHF23Q9BUL5 403 aaPredicted RBP25.55■■□□□ 1.68
NVL-220ENST00000489194 FOXD1Q16676 465 aa24.31■■□□□ 1.48
NVL-220ENST00000489194 POTEDQ86YR6 584 aa23.55■■□□□ 1.36
NVL-220ENST00000489194 MSH5O43196 834 aa22.97■■□□□ 1.27
NVL-220ENST00000489194 PIAS4Q8N2W9 510 aaPredicted RBP22.56■■□□□ 1.2
NVL-220ENST00000489194 PPP6R1Q9UPN7 881 aa22.24■■□□□ 1.15
NVL-220ENST00000489194 PLPPR3Q6T4P5 718 aa22.22■■□□□ 1.15
NVL-220ENST00000489194 ADRA2BP18089 450 aa22.13■■□□□ 1.13
NVL-220ENST00000489194 MAPK8IP2Q13387 824 aaPredicted RBP20.53■□□□□ 0.88
NVL-220ENST00000489194 DMRT2Q9Y5R5 561 aa20.5■□□□□ 0.87
NVL-220ENST00000489194 SCAF1Q9H7N4 1312 aaKnown RBP20.2■□□□□ 0.82
NVL-220ENST00000489194 CACNB1Q02641 598 aaPredicted RBP20.12■□□□□ 0.81
NVL-220ENST00000489194 DCAF8L1A6NGE4 600 aa19.72■□□□□ 0.75
NVL-220ENST00000489194 RNF39Q9H2S5 420 aa19.56■□□□□ 0.72
NVL-220ENST00000489194 HOXD11P31277 338 aaPredicted RBP19.49■□□□□ 0.71
NVL-220ENST00000489194 PPP4R3CPQ6ZMV5 832 aa19.41■□□□□ 0.7
NVL-220ENST00000489194 C1QBPQ07021 282 aaKnown RBP19.21■□□□□ 0.67
NVL-220ENST00000489194 CNKSR2Q8WXI2 1034 aa19.17■□□□□ 0.66
NVL-220ENST00000489194 RNF216Q9NWF9 866 aaPredicted RBP19.16■□□□□ 0.66
NVL-220ENST00000489194 DNAJC5BQ9UF47 199 aa18.9■□□□□ 0.62
NVL-220ENST00000489194 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.58■□□□□ 0.56
NVL-220ENST00000489194 NISCHQ9Y2I1 1504 aa18.58■□□□□ 0.56
NVL-220ENST00000489194 NCBP3Q53F19 620 aaKnown RBP18.43■□□□□ 0.54
NVL-220ENST00000489194 POTEHQ6S545 545 aa18.32■□□□□ 0.52
NVL-220ENST00000489194 NPM3O75607 178 aaKnown RBP18.21■□□□□ 0.51
NVL-220ENST00000489194 U3KPZ7 1027 aaPredicted RBP18.13■□□□□ 0.49
NVL-220ENST00000489194 DSG3P32926 999 aa18.1■□□□□ 0.49
NVL-220ENST00000489194 SPINK5Q9NQ38 1064 aaPredicted RBP18.07■□□□□ 0.48
NVL-220ENST00000489194 CAPN15O75808 1086 aa18.06■□□□□ 0.48
NVL-220ENST00000489194 TRHP20396 242 aaPredicted RBP17.62■□□□□ 0.41
NVL-220ENST00000489194 ABCB7O75027 752 aa17.61■□□□□ 0.41
NVL-220ENST00000489194 SLC4A2P04920 1241 aa17.56■□□□□ 0.4
NVL-220ENST00000489194 ZNF219Q9P2Y4 722 aaPredicted RBP17.54■□□□□ 0.4
NVL-220ENST00000489194 APLP2Q06481 763 aa17.5■□□□□ 0.39
NVL-220ENST00000489194 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.34■□□□□ 0.37
NVL-220ENST00000489194 HNRNPUL2Q1KMD3 747 aaKnown RBP17.34■□□□□ 0.37
NVL-220ENST00000489194 KCNA4P22459 653 aa17.3■□□□□ 0.36
NVL-220ENST00000489194 RBM42Q9BTD8 480 aaKnown RBP17.26■□□□□ 0.35
NVL-220ENST00000489194 SAMD1Q6SPF0 538 aaPredicted RBP17.23■□□□□ 0.35
NVL-220ENST00000489194 CHRDL2Q6WN34 429 aa17.17■□□□□ 0.34
NVL-220ENST00000489194 POLA2Q14181 598 aa16.98■□□□□ 0.31
NVL-220ENST00000489194 SP7Q8TDD2 431 aaPredicted RBP16.87■□□□□ 0.29
NVL-220ENST00000489194 MYCNP04198 464 aaPredicted RBP16.84■□□□□ 0.29
NVL-220ENST00000489194 AKT1S1Q96B36 256 aa16.73■□□□□ 0.27
NVL-220ENST00000489194 PIP4P2Q8N4L2 257 aa16.63■□□□□ 0.25
NVL-220ENST00000489194 REM2Q8IYK8 340 aaPredicted RBP16.59■□□□□ 0.25
NVL-220ENST00000489194 ZBTB12Q9Y330 459 aaPredicted RBP16.56■□□□□ 0.24
NVL-220ENST00000489194 ATF5Q9Y2D1 282 aaPredicted RBP16.54■□□□□ 0.24
NVL-220ENST00000489194 OSCARQ8IYS5 282 aa16.51■□□□□ 0.23
NVL-220ENST00000489194 HAX1O00165 279 aa16.48■□□□□ 0.23
NVL-220ENST00000489194 PITPNM1O00562 1244 aa16.45■□□□□ 0.22
NVL-220ENST00000489194 FXR2P51116 673 aaKnown RBP eCLIP16.4■□□□□ 0.22
NVL-220ENST00000489194 FOXD4L1Q9NU39 408 aa16.33■□□□□ 0.2
NVL-220ENST00000489194 CCDC180Q9P1Z9 1646 aa16.28■□□□□ 0.2
NVL-220ENST00000489194 EVX2Q03828 476 aa16.26■□□□□ 0.19
NVL-220ENST00000489194 SLC4A1APQ9BWU0 796 aaKnown RBP16.19■□□□□ 0.18
NVL-220ENST00000489194 SPDYE2BA6NHP3 402 aa16.01■□□□□ 0.15
NVL-220ENST00000489194 SPDYE6P0CI01 402 aa16.01■□□□□ 0.15
NVL-220ENST00000489194 SPDYE2Q495Y8 402 aa16.01■□□□□ 0.15
NVL-220ENST00000489194 PRKAR2AP13861 404 aaKnown RBP16■□□□□ 0.15
NVL-220ENST00000489194 CLEC11AQ9Y240 323 aa15.92■□□□□ 0.14
NVL-220ENST00000489194 C19orf67A6NJJ6 358 aa15.91■□□□□ 0.14
NVL-220ENST00000489194 ZBTB22O15209 634 aa15.91■□□□□ 0.14
NVL-220ENST00000489194 FBLN2P98095 1184 aa15.9■□□□□ 0.14
NVL-220ENST00000489194 SPDYE1Q8NFV5 336 aaPredicted RBP15.89■□□□□ 0.13
NVL-220ENST00000489194 ATXN8OSP0DMR3 200 aa15.85■□□□□ 0.13
NVL-220ENST00000489194 GABBR2O75899 941 aa15.84■□□□□ 0.13
NVL-220ENST00000489194 LHX8Q68G74 356 aa15.81■□□□□ 0.12
NVL-220ENST00000489194 MKRN4PQ13434 485 aaPredicted RBP15.74■□□□□ 0.11
NVL-220ENST00000489194 SSUH2Q9Y2M2 353 aa15.74■□□□□ 0.11
NVL-220ENST00000489194 ZNF692Q9BU19 519 aaPredicted RBP15.72■□□□□ 0.11
NVL-220ENST00000489194 CHADLQ6NUI6 762 aa15.71■□□□□ 0.11
NVL-220ENST00000489194 ZCCHC6Q5VYS8 1495 aaKnown RBP15.61■□□□□ 0.09
NVL-220ENST00000489194 PRR29P0C7W0 189 aa15.54■□□□□ 0.08
NVL-220ENST00000489194 POTEIP0CG38 1075 aa15.51■□□□□ 0.07
NVL-220ENST00000489194 PABPN1Q86U42 306 aaKnown RBP eCLIP15.48■□□□□ 0.07
NVL-220ENST00000489194 CD44P16070 742 aaKnown RBP15.46■□□□□ 0.07
NVL-220ENST00000489194 DCAF1Q9Y4B6 1507 aa15.45■□□□□ 0.06
NVL-220ENST00000489194 FARP1Q9Y4F1 1045 aaPredicted RBP15.38■□□□□ 0.05
NVL-220ENST00000489194 PLSCR2Q9NRY7 297 aa15.36■□□□□ 0.05
NVL-220ENST00000489194 CLCN6P51797 869 aa15.3■□□□□ 0.04
NVL-220ENST00000489194 DCAF8L2P0C7V8 631 aa15.29■□□□□ 0.04
NVL-220ENST00000489194 DCBLD2Q96PD2 775 aa15.27■□□□□ 0.04
NVL-220ENST00000489194 MYO15BQ96JP2 1530 aa15.27■□□□□ 0.03
NVL-220ENST00000489194 ZNF579Q8NAF0 562 aaKnown RBP15.18■□□□□ 0.02
NVL-220ENST00000489194 ABCC9O60706 1549 aa15.16■□□□□ 0.02
NVL-220ENST00000489194 ZRANB1Q9UGI0 708 aa15.14■□□□□ 0.01
NVL-220ENST00000489194 NACADO15069 1562 aa15.13■□□□□ 0.01
NVL-220ENST00000489194 SHROOM4Q9ULL8 1493 aa15.08■□□□□ 0.01
NVL-220ENST00000489194 GALR2O43603 387 aaPredicted RBP15.07■□□□□ 0
NVL-220ENST00000489194 OTUD5Q96G74 571 aa15.06■□□□□ 0
NVL-220ENST00000489194 CREBZFQ9NS37 354 aa15.03■□□□□ -0
NVL-220ENST00000489194 POTEB2H3BUK9 544 aa14.99□□□□□ -0.01
NVL-220ENST00000489194 RB1CC1Q8TDY2 1594 aa14.98□□□□□ -0.01
NVL-220ENST00000489194 POTEMA6NI47 508 aa14.93□□□□□ -0.02
NVL-220ENST00000489194 PHF12Q96QT6 1004 aa14.9□□□□□ -0.02
NVL-220ENST00000489194 STAG3Q9UJ98 1225 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 153.2 ms