RNA–Protein interactions for RNA: ENST00000488923.1

HDLBP-243, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 582 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-243ENST00000488923 NESP48681 1621 aa10.12□□□□□ -0.79
HDLBP-243ENST00000488923 MIER1Q8N108 512 aa10.1□□□□□ -0.79
HDLBP-243ENST00000488923 SLAIN1Q8ND83 568 aa10.1□□□□□ -0.79
HDLBP-243ENST00000488923 TRIM35Q9UPQ4 493 aa10.09□□□□□ -0.79
HDLBP-243ENST00000488923 CUL7Q14999 1698 aa10.09□□□□□ -0.79
HDLBP-243ENST00000488923 URB2Q14146 1524 aaKnown RBP10.07□□□□□ -0.8
HDLBP-243ENST00000488923 ST18O60284 1047 aa10.07□□□□□ -0.8
HDLBP-243ENST00000488923 ARAP1Q96P48 1450 aa10.06□□□□□ -0.8
HDLBP-243ENST00000488923 PPARGC1BQ86YN6 1023 aaKnown RBP10.05□□□□□ -0.8
HDLBP-243ENST00000488923 PCDHB13Q9Y5F0 798 aa10.05□□□□□ -0.8
HDLBP-243ENST00000488923 RAD54L2Q9Y4B4 1467 aa10.04□□□□□ -0.8
HDLBP-243ENST00000488923 ARHGAP35Q9NRY4 1499 aa10.04□□□□□ -0.8
HDLBP-243ENST00000488923 MRC2Q9UBG0 1479 aa10.04□□□□□ -0.8
HDLBP-243ENST00000488923 MAP3K1Q13233 1512 aa10.03□□□□□ -0.8
HDLBP-243ENST00000488923 FHAD1B1AJZ9 1412 aa10.03□□□□□ -0.8
HDLBP-243ENST00000488923 TMEM121BQ9BXQ6 578 aaPredicted RBP10.03□□□□□ -0.8
HDLBP-243ENST00000488923 WDR97A6NE52 1622 aa10.03□□□□□ -0.8
HDLBP-243ENST00000488923 EFCAB5A4FU69 1503 aa10.02□□□□□ -0.8
HDLBP-243ENST00000488923 SNPHO15079 494 aa10.02□□□□□ -0.81
HDLBP-243ENST00000488923 PLCG2P16885 1265 aa10.02□□□□□ -0.81
HDLBP-243ENST00000488923 ABCA5Q8WWZ7 1642 aa10.01□□□□□ -0.81
HDLBP-243ENST00000488923 ZBTB47Q9UFB7 747 aaPredicted RBP10.01□□□□□ -0.81
HDLBP-243ENST00000488923 GAPVD1Q14C86 1478 aa10.01□□□□□ -0.81
HDLBP-243ENST00000488923 IFNL1Q8IU54 200 aa10□□□□□ -0.81
HDLBP-243ENST00000488923 NUBP1P53384 320 aa9.99□□□□□ -0.81
HDLBP-243ENST00000488923 MMRN1Q13201 1228 aa9.99□□□□□ -0.81
HDLBP-243ENST00000488923 CCER1Q8TC90 406 aaPredicted RBP9.99□□□□□ -0.81
HDLBP-243ENST00000488923 KIF21AQ7Z4S6 1674 aa9.99□□□□□ -0.81
HDLBP-243ENST00000488923 RANGAP1P46060 587 aaPredicted RBP9.98□□□□□ -0.81
HDLBP-243ENST00000488923 AQRO60306 1485 aaKnown RBP eCLIP9.98□□□□□ -0.812e-7■□□□□ 9
HDLBP-243ENST00000488923 IFT140Q96RY7 1462 aa9.98□□□□□ -0.81
HDLBP-243ENST00000488923 SPNS2Q8IVW8 549 aa9.97□□□□□ -0.81
HDLBP-243ENST00000488923 TARBP1Q13395 1621 aaKnown RBP9.96□□□□□ -0.81
HDLBP-243ENST00000488923 SLC24A1O60721 1099 aa9.96□□□□□ -0.82
HDLBP-243ENST00000488923 PLCD3Q8N3E9 789 aa9.96□□□□□ -0.82
HDLBP-243ENST00000488923 TMEM106CQ9BVX2 250 aa9.96□□□□□ -0.82
HDLBP-243ENST00000488923 TDRD9Q8NDG6 1382 aaKnown RBP9.96□□□□□ -0.82
HDLBP-243ENST00000488923 WDR62O43379 1518 aa9.96□□□□□ -0.82
HDLBP-243ENST00000488923 FMN1Q68DA7 1419 aa9.95□□□□□ -0.82
HDLBP-243ENST00000488923 CTTNBP2Q8WZ74 1663 aa9.94□□□□□ -0.82
HDLBP-243ENST00000488923 TTBK1Q5TCY1 1321 aaPredicted RBP9.94□□□□□ -0.82
HDLBP-243ENST00000488923 GRIN2BQ13224 1484 aa9.93□□□□□ -0.82
HDLBP-243ENST00000488923 FYCO1Q9BQS8 1478 aa9.93□□□□□ -0.82
HDLBP-243ENST00000488923 RRBP1Q9P2E9 1410 aaKnown RBP9.92□□□□□ -0.82
HDLBP-243ENST00000488923 IRX5P78411 483 aaPredicted RBP9.92□□□□□ -0.82
HDLBP-243ENST00000488923 OCEL1Q9H607 264 aa9.92□□□□□ -0.82
HDLBP-243ENST00000488923 TIAM1Q13009 1591 aa9.92□□□□□ -0.82
HDLBP-243ENST00000488923 CASKIN1Q8WXD9 1431 aa9.91□□□□□ -0.82
HDLBP-243ENST00000488923 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.91□□□□□ -0.82
HDLBP-243ENST00000488923 ERCC6Q03468 1493 aa9.91□□□□□ -0.82
HDLBP-243ENST00000488923 FAM212AQ96EL1 285 aa9.9□□□□□ -0.82
HDLBP-243ENST00000488923 CLSPNQ9HAW4 1339 aa9.89□□□□□ -0.83
HDLBP-243ENST00000488923 THOC2Q8NI27 1593 aaKnown RBP9.88□□□□□ -0.83
HDLBP-243ENST00000488923 LRRC9Q6ZRR7 1453 aa9.88□□□□□ -0.83
HDLBP-243ENST00000488923 KANK4Q5T7N3 995 aaPredicted RBP9.88□□□□□ -0.83
HDLBP-243ENST00000488923 ADAMTS12P58397 1594 aa9.88□□□□□ -0.83
HDLBP-243ENST00000488923 SAMD9Q5K651 1589 aa9.88□□□□□ -0.83
HDLBP-243ENST00000488923 CCNB3Q8WWL7 1395 aa9.88□□□□□ -0.83
HDLBP-243ENST00000488923 PBRM1Q86U86 1689 aa9.87□□□□□ -0.83
HDLBP-243ENST00000488923 CFAP43Q8NDM7 1665 aa9.87□□□□□ -0.83
HDLBP-243ENST00000488923 PCF11O94913 1555 aaKnown RBP9.86□□□□□ -0.83
HDLBP-243ENST00000488923 FHOD3Q2V2M9 1422 aa9.86□□□□□ -0.83
HDLBP-243ENST00000488923 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.85□□□□□ -0.83
HDLBP-243ENST00000488923 MAGI1Q96QZ7 1491 aaPredicted RBP9.84□□□□□ -0.83
HDLBP-243ENST00000488923 CCDC18Q5T9S5 1454 aa9.83□□□□□ -0.84
HDLBP-243ENST00000488923 IQGAP2Q13576 1575 aa9.83□□□□□ -0.84
HDLBP-243ENST00000488923 MARVELD3Q96A59 401 aa9.82□□□□□ -0.84
HDLBP-243ENST00000488923 SNAPC4Q5SXM2 1469 aa9.82□□□□□ -0.84
HDLBP-243ENST00000488923 KIAA0586Q9BVV6 1533 aa9.82□□□□□ -0.84
HDLBP-243ENST00000488923 UGGT2Q9NYU1 1516 aa9.82□□□□□ -0.84
HDLBP-243ENST00000488923 P3H3Q8IVL6 736 aa9.81□□□□□ -0.84
HDLBP-243ENST00000488923 MTUS2Q5JR59 1369 aa9.79□□□□□ -0.84
HDLBP-243ENST00000488923 PYGBP11216 843 aa9.79□□□□□ -0.84
HDLBP-243ENST00000488923 ATP1B4Q9UN42 357 aaPredicted RBP9.79□□□□□ -0.84
HDLBP-243ENST00000488923 EIF4G3O43432 1585 aaKnown RBP9.79□□□□□ -0.84
HDLBP-243ENST00000488923 SYNJ2O15056 1496 aa9.79□□□□□ -0.84
HDLBP-243ENST00000488923 GRIN2AQ12879 1464 aa9.79□□□□□ -0.84
HDLBP-243ENST00000488923 ZNF608Q9ULD9 1512 aaPredicted RBP9.78□□□□□ -0.84
HDLBP-243ENST00000488923 PCDHB8Q9UN66 801 aa9.78□□□□□ -0.84
HDLBP-243ENST00000488923 HECW1Q76N89 1606 aa9.78□□□□□ -0.84
HDLBP-243ENST00000488923 EHBP1L1Q8N3D4 1523 aa9.77□□□□□ -0.84
HDLBP-243ENST00000488923 EMP3P54852 163 aa9.77□□□□□ -0.85
HDLBP-243ENST00000488923 L3MBTL3Q96JM7 780 aaPredicted RBP9.77□□□□□ -0.85
HDLBP-243ENST00000488923 C3orf67Q6ZVT6 689 aa9.76□□□□□ -0.85
HDLBP-243ENST00000488923 PHLDB1Q86UU1 1377 aa9.75□□□□□ -0.85
HDLBP-243ENST00000488923 DCAF8Q5TAQ9 597 aa9.75□□□□□ -0.85
HDLBP-243ENST00000488923 ACIN1Q9UKV3 1341 aaKnown RBP9.75□□□□□ -0.85
HDLBP-243ENST00000488923 PDCD7Q8N8D1 485 aaKnown RBP9.74□□□□□ -0.85
HDLBP-243ENST00000488923 CHMP7Q8WUX9 453 aaPredicted RBP9.74□□□□□ -0.85
HDLBP-243ENST00000488923 DHX57Q6P158 1386 aaKnown RBP9.73□□□□□ -0.85
HDLBP-243ENST00000488923 CARMIL2Q6F5E8 1435 aa9.73□□□□□ -0.85
HDLBP-243ENST00000488923 FGD6Q6ZV73 1430 aa9.73□□□□□ -0.85
HDLBP-243ENST00000488923 SETD5Q9C0A6 1442 aa9.73□□□□□ -0.85
HDLBP-243ENST00000488923 CDK11AQ9UQ88 783 aaPredicted RBP9.72□□□□□ -0.85
HDLBP-243ENST00000488923 SUPT6HQ7KZ85 1726 aaKnown RBP9.72□□□□□ -0.85
HDLBP-243ENST00000488923 NUP160Q12769 1436 aa9.72□□□□□ -0.85
HDLBP-243ENST00000488923 MYOM3Q5VTT5 1437 aa9.72□□□□□ -0.85
HDLBP-243ENST00000488923 KIAA0556O60303 1618 aa9.71□□□□□ -0.85
HDLBP-243ENST00000488923 GOLGA2Q08379 1002 aa9.71□□□□□ -0.86
HDLBP-243ENST00000488923 FAM50AQ14320 339 aaKnown RBP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms