RNA–Protein interactions for RNA: ENST00000488923.1

HDLBP-243, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 582 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-243ENST00000488923 AEBP2Q6ZN18 517 aaPredicted RBP21.64■■□□□ 1.05
HDLBP-243ENST00000488923 CHIC1Q5VXU3 224 aa20.39■□□□□ 0.85
HDLBP-243ENST00000488923 SENP3Q9H4L4 574 aaPredicted RBP18.68■□□□□ 0.58
HDLBP-243ENST00000488923 PHF23Q9BUL5 403 aaPredicted RBP18.32■□□□□ 0.52
HDLBP-243ENST00000488923 FOXD1Q16676 465 aa17.37■□□□□ 0.37
HDLBP-243ENST00000488923 POTEDQ86YR6 584 aa16.86■□□□□ 0.29
HDLBP-243ENST00000488923 MSH5O43196 834 aa16.57■□□□□ 0.24
HDLBP-243ENST00000488923 PIAS4Q8N2W9 510 aaPredicted RBP16.16■□□□□ 0.18
HDLBP-243ENST00000488923 PLPPR3Q6T4P5 718 aa15.97■□□□□ 0.15
HDLBP-243ENST00000488923 PPP6R1Q9UPN7 881 aa15.89■□□□□ 0.13
HDLBP-243ENST00000488923 ADRA2BP18089 450 aa15.8■□□□□ 0.12
HDLBP-243ENST00000488923 DMRT2Q9Y5R5 561 aa14.7□□□□□ -0.06
HDLBP-243ENST00000488923 SCAF1Q9H7N4 1312 aaKnown RBP14.64□□□□□ -0.07
HDLBP-243ENST00000488923 MAPK8IP2Q13387 824 aaPredicted RBP14.62□□□□□ -0.07
HDLBP-243ENST00000488923 CACNB1Q02641 598 aaPredicted RBP14.47□□□□□ -0.09
HDLBP-243ENST00000488923 NISCHQ9Y2I1 1504 aa14.36□□□□□ -0.11
HDLBP-243ENST00000488923 DCAF8L1A6NGE4 600 aa14.13□□□□□ -0.15
HDLBP-243ENST00000488923 RNF39Q9H2S5 420 aa14.02□□□□□ -0.17
HDLBP-243ENST00000488923 HOXD11P31277 338 aaPredicted RBP13.98□□□□□ -0.17
HDLBP-243ENST00000488923 PPP4R3CPQ6ZMV5 832 aa13.92□□□□□ -0.18
HDLBP-243ENST00000488923 C1QBPQ07021 282 aaKnown RBP13.86□□□□□ -0.19
HDLBP-243ENST00000488923 CNKSR2Q8WXI2 1034 aa13.79□□□□□ -0.2
HDLBP-243ENST00000488923 RNF216Q9NWF9 866 aaPredicted RBP13.78□□□□□ -0.2
HDLBP-243ENST00000488923 DNAJC5BQ9UF47 199 aa13.69□□□□□ -0.22
HDLBP-243ENST00000488923 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.35□□□□□ -0.274e-19■□□□□ 11.2
HDLBP-243ENST00000488923 NCBP3Q53F19 620 aaKnown RBP13.32□□□□□ -0.28
HDLBP-243ENST00000488923 POTEHQ6S545 545 aa13.15□□□□□ -0.3
HDLBP-243ENST00000488923 NPM3O75607 178 aaKnown RBP13.1□□□□□ -0.31
HDLBP-243ENST00000488923 U3KPZ7 1027 aaPredicted RBP12.97□□□□□ -0.33
HDLBP-243ENST00000488923 DSG3P32926 999 aa12.96□□□□□ -0.33
HDLBP-243ENST00000488923 CAPN15O75808 1086 aa12.95□□□□□ -0.34
HDLBP-243ENST00000488923 SPINK5Q9NQ38 1064 aaPredicted RBP12.88□□□□□ -0.35
HDLBP-243ENST00000488923 APLP2Q06481 763 aa12.74□□□□□ -0.37
HDLBP-243ENST00000488923 ZNF219Q9P2Y4 722 aaPredicted RBP12.64□□□□□ -0.39
HDLBP-243ENST00000488923 SLC4A2P04920 1241 aa12.63□□□□□ -0.39
HDLBP-243ENST00000488923 TRHP20396 242 aaPredicted RBP12.61□□□□□ -0.39
HDLBP-243ENST00000488923 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.58□□□□□ -0.4
HDLBP-243ENST00000488923 HNRNPUL2Q1KMD3 747 aaKnown RBP12.58□□□□□ -0.4
HDLBP-243ENST00000488923 KCNA4P22459 653 aa12.56□□□□□ -0.4
HDLBP-243ENST00000488923 ABCB7O75027 752 aa12.54□□□□□ -0.4
HDLBP-243ENST00000488923 RBM42Q9BTD8 480 aaKnown RBP12.49□□□□□ -0.41
HDLBP-243ENST00000488923 CCDC180Q9P1Z9 1646 aa12.45□□□□□ -0.42
HDLBP-243ENST00000488923 SAMD1Q6SPF0 538 aaPredicted RBP12.44□□□□□ -0.42
HDLBP-243ENST00000488923 CHRDL2Q6WN34 429 aa12.32□□□□□ -0.44
HDLBP-243ENST00000488923 POLA2Q14181 598 aa12.17□□□□□ -0.46
HDLBP-243ENST00000488923 SP7Q8TDD2 431 aaPredicted RBP12.12□□□□□ -0.47
HDLBP-243ENST00000488923 ZCCHC6Q5VYS8 1495 aaKnown RBP12.11□□□□□ -0.47
HDLBP-243ENST00000488923 MYCNP04198 464 aaPredicted RBP12.11□□□□□ -0.47
HDLBP-243ENST00000488923 AKT1S1Q96B36 256 aa12.07□□□□□ -0.48
HDLBP-243ENST00000488923 ZBTB12Q9Y330 459 aaPredicted RBP12□□□□□ -0.49
HDLBP-243ENST00000488923 DCAF1Q9Y4B6 1507 aa11.96□□□□□ -0.5
HDLBP-243ENST00000488923 ATF5Q9Y2D1 282 aaPredicted RBP11.92□□□□□ -0.5
HDLBP-243ENST00000488923 REM2Q8IYK8 340 aaPredicted RBP11.9□□□□□ -0.5
HDLBP-243ENST00000488923 PIP4P2Q8N4L2 257 aa11.9□□□□□ -0.5
HDLBP-243ENST00000488923 HAX1O00165 279 aa11.86□□□□□ -0.51
HDLBP-243ENST00000488923 OSCARQ8IYS5 282 aa11.8□□□□□ -0.52
HDLBP-243ENST00000488923 FOXD4L1Q9NU39 408 aa11.79□□□□□ -0.52
HDLBP-243ENST00000488923 FXR2P51116 673 aaKnown RBP eCLIP11.78□□□□□ -0.522e-7■□□□□ 9.7
HDLBP-243ENST00000488923 MYO15BQ96JP2 1530 aa11.77□□□□□ -0.52
HDLBP-243ENST00000488923 PITPNM1O00562 1244 aa11.74□□□□□ -0.53
HDLBP-243ENST00000488923 SLC4A1APQ9BWU0 796 aaKnown RBP11.74□□□□□ -0.53
HDLBP-243ENST00000488923 SHROOM4Q9ULL8 1493 aa11.74□□□□□ -0.53
HDLBP-243ENST00000488923 DCAF8L2P0C7V8 631 aa11.73□□□□□ -0.53
HDLBP-243ENST00000488923 ZBTB22O15209 634 aa11.59□□□□□ -0.55
HDLBP-243ENST00000488923 NACADO15069 1562 aa11.58□□□□□ -0.56
HDLBP-243ENST00000488923 EVX2Q03828 476 aa11.55□□□□□ -0.56
HDLBP-243ENST00000488923 SPDYE2BA6NHP3 402 aa11.54□□□□□ -0.56
HDLBP-243ENST00000488923 SPDYE6P0CI01 402 aa11.54□□□□□ -0.56
HDLBP-243ENST00000488923 SPDYE2Q495Y8 402 aa11.54□□□□□ -0.56
HDLBP-243ENST00000488923 ABCC9O60706 1549 aa11.49□□□□□ -0.57
HDLBP-243ENST00000488923 FBLN2P98095 1184 aa11.48□□□□□ -0.57
HDLBP-243ENST00000488923 PRKAR2AP13861 404 aaKnown RBP11.47□□□□□ -0.57
HDLBP-243ENST00000488923 SPDYE1Q8NFV5 336 aaPredicted RBP11.46□□□□□ -0.57
HDLBP-243ENST00000488923 SUPT5HO00267 1087 aaKnown RBP11.45□□□□□ -0.58
HDLBP-243ENST00000488923 ATXN8OSP0DMR3 200 aa11.44□□□□□ -0.58
HDLBP-243ENST00000488923 CLEC11AQ9Y240 323 aa11.42□□□□□ -0.58
HDLBP-243ENST00000488923 C19orf67A6NJJ6 358 aa11.41□□□□□ -0.58
HDLBP-243ENST00000488923 RB1CC1Q8TDY2 1594 aa11.41□□□□□ -0.58
HDLBP-243ENST00000488923 SCRIBQ14160 1630 aa11.38□□□□□ -0.59
HDLBP-243ENST00000488923 LHX8Q68G74 356 aa11.37□□□□□ -0.59
HDLBP-243ENST00000488923 GABBR2O75899 941 aa11.36□□□□□ -0.59
HDLBP-243ENST00000488923 MKRN4PQ13434 485 aaPredicted RBP11.34□□□□□ -0.59
HDLBP-243ENST00000488923 ZNF692Q9BU19 519 aaPredicted RBP11.3□□□□□ -0.6
HDLBP-243ENST00000488923 SSUH2Q9Y2M2 353 aa11.3□□□□□ -0.6
HDLBP-243ENST00000488923 RSF1Q96T23 1441 aaPredicted RBP11.21□□□□□ -0.61
HDLBP-243ENST00000488923 PRR29P0C7W0 189 aa11.21□□□□□ -0.61
HDLBP-243ENST00000488923 CLCN6P51797 869 aa11.2□□□□□ -0.62
HDLBP-243ENST00000488923 CHADLQ6NUI6 762 aa11.19□□□□□ -0.62
HDLBP-243ENST00000488923 BAZ1AQ9NRL2 1556 aaPredicted RBP11.11□□□□□ -0.63
HDLBP-243ENST00000488923 PABPN1Q86U42 306 aaKnown RBP eCLIP11.09□□□□□ -0.63
HDLBP-243ENST00000488923 CD44P16070 742 aaKnown RBP11.08□□□□□ -0.64
HDLBP-243ENST00000488923 CECR2Q9BXF3 1484 aa11.06□□□□□ -0.64
HDLBP-243ENST00000488923 MROH2BQ7Z745 1585 aa11.05□□□□□ -0.64
HDLBP-243ENST00000488923 POTEIP0CG38 1075 aa11.04□□□□□ -0.64
HDLBP-243ENST00000488923 FARP1Q9Y4F1 1045 aaPredicted RBP11.04□□□□□ -0.64
HDLBP-243ENST00000488923 DCBLD2Q96PD2 775 aa11.02□□□□□ -0.65
HDLBP-243ENST00000488923 PLSCR2Q9NRY7 297 aa11.01□□□□□ -0.65
HDLBP-243ENST00000488923 UNC13AQ9UPW8 1703 aa11.01□□□□□ -0.65
HDLBP-243ENST00000488923 SMARCA4P51532 1647 aa10.97□□□□□ -0.65
HDLBP-243ENST00000488923 BICRAQ9NZM4 1560 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms