RNA–Protein interactions for RNA: ENST00000485499.1

PTPRT-208, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

TSL 3

Gene PTPRT, Length 208 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-208ENST00000485499 OCEL1Q9H607 264 aa12□□□□□ -0.49
PTPRT-208ENST00000485499 CHRM1P11229 460 aaPredicted RBP11.99□□□□□ -0.49
PTPRT-208ENST00000485499 AMER1Q5JTC6 1135 aaPredicted RBP11.99□□□□□ -0.49
PTPRT-208ENST00000485499 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.98□□□□□ -0.49
PTPRT-208ENST00000485499 WIZO95785 1651 aa11.97□□□□□ -0.49
PTPRT-208ENST00000485499 URB2Q14146 1524 aaKnown RBP11.96□□□□□ -0.49
PTPRT-208ENST00000485499 EIF4G3O43432 1585 aaKnown RBP11.95□□□□□ -0.5
PTPRT-208ENST00000485499 ARAP1Q96P48 1450 aa11.95□□□□□ -0.5
PTPRT-208ENST00000485499 PKD2Q13563 968 aa11.94□□□□□ -0.5
PTPRT-208ENST00000485499 PYGBP11216 843 aa11.93□□□□□ -0.5
PTPRT-208ENST00000485499 CYB5RLQ6IPT4 315 aa11.92□□□□□ -0.5
PTPRT-208ENST00000485499 KRTAP3-3Q9BYR6 98 aa11.92□□□□□ -0.5
PTPRT-208ENST00000485499 KRTAP3-2Q9BYR7 98 aa11.92□□□□□ -0.5
PTPRT-208ENST00000485499 ECM2O94769 699 aaPredicted RBP11.9□□□□□ -0.5
PTPRT-208ENST00000485499 ZNF608Q9ULD9 1512 aaPredicted RBP11.89□□□□□ -0.51
PTPRT-208ENST00000485499 EMP3P54852 163 aa11.88□□□□□ -0.51
PTPRT-208ENST00000485499 POTEB3A0JP26 581 aa11.87□□□□□ -0.51
PTPRT-208ENST00000485499 POTEBQ6S5H4 581 aa11.87□□□□□ -0.51
PTPRT-208ENST00000485499 ZNF467Q7Z7K2 595 aaPredicted RBP11.86□□□□□ -0.51
PTPRT-208ENST00000485499 RTN4Q9NQC3 1192 aaKnown RBP11.85□□□□□ -0.51
PTPRT-208ENST00000485499 CFTRP13569 1480 aa11.84□□□□□ -0.51
PTPRT-208ENST00000485499 HS3ST6Q96QI5 342 aa11.84□□□□□ -0.51
PTPRT-208ENST00000485499 IFT140Q96RY7 1462 aa11.83□□□□□ -0.52
PTPRT-208ENST00000485499 RSF1Q96T23 1441 aaPredicted RBP11.8□□□□□ -0.52
PTPRT-208ENST00000485499 RIOK3O14730 519 aaKnown RBP11.79□□□□□ -0.52
PTPRT-208ENST00000485499 TAOK2Q9UL54 1235 aa11.79□□□□□ -0.52
PTPRT-208ENST00000485499 FAM205CA6NFA0 338 aa11.78□□□□□ -0.52
PTPRT-208ENST00000485499 PDCD7Q8N8D1 485 aaKnown RBP11.78□□□□□ -0.52
PTPRT-208ENST00000485499 C3orf67Q6ZVT6 689 aa11.76□□□□□ -0.53
PTPRT-208ENST00000485499 RNF25Q96BH1 459 aaPredicted RBP11.76□□□□□ -0.53
PTPRT-208ENST00000485499 PCDHB8Q9UN66 801 aa11.76□□□□□ -0.53
PTPRT-208ENST00000485499 RGL2O15211 777 aa11.75□□□□□ -0.53
PTPRT-208ENST00000485499 L3MBTL3Q96JM7 780 aaPredicted RBP11.75□□□□□ -0.53
PTPRT-208ENST00000485499 TARBP1Q13395 1621 aaKnown RBP11.75□□□□□ -0.53
PTPRT-208ENST00000485499 TOPBP1Q92547 1522 aa11.74□□□□□ -0.53
PTPRT-208ENST00000485499 VGFO15240 615 aaPredicted RBP11.73□□□□□ -0.53
PTPRT-208ENST00000485499 PDAP1Q13442 181 aaKnown RBP11.73□□□□□ -0.53
PTPRT-208ENST00000485499 CLASP1Q7Z460 1538 aa11.73□□□□□ -0.53
PTPRT-208ENST00000485499 KIF13AQ9H1H9 1805 aa11.72□□□□□ -0.53
PTPRT-208ENST00000485499 TOP2AP11388 1531 aaKnown RBP11.7□□□□□ -0.54
PTPRT-208ENST00000485499 DNMBPQ6XZF7 1577 aa11.7□□□□□ -0.54
PTPRT-208ENST00000485499 PSEN1P49768 467 aa11.69□□□□□ -0.54
PTPRT-208ENST00000485499 SYNJ1O43426 1573 aa11.68□□□□□ -0.54
PTPRT-208ENST00000485499 AQRO60306 1485 aaKnown RBP eCLIP11.66□□□□□ -0.54
PTPRT-208ENST00000485499 PBRM1Q86U86 1689 aa11.64□□□□□ -0.55
PTPRT-208ENST00000485499 ILDR1Q86SU0 546 aaPredicted RBP11.63□□□□□ -0.55
PTPRT-208ENST00000485499 ABCC8Q09428 1581 aa11.62□□□□□ -0.55
PTPRT-208ENST00000485499 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.62□□□□□ -0.55
PTPRT-208ENST00000485499 MKRN3Q13064 507 aaKnown RBP11.62□□□□□ -0.55
PTPRT-208ENST00000485499 ZFP91Q96JP5 570 aaPredicted RBP11.62□□□□□ -0.55
PTPRT-208ENST00000485499 RNF166Q96A37 237 aaPredicted RBP11.61□□□□□ -0.55
PTPRT-208ENST00000485499 SNAPC4Q5SXM2 1469 aa11.6□□□□□ -0.55
PTPRT-208ENST00000485499 HOXB3P14651 431 aaPredicted RBP11.6□□□□□ -0.55
PTPRT-208ENST00000485499 HOXB1P14653 301 aaPredicted RBP11.59□□□□□ -0.55
PTPRT-208ENST00000485499 WDR97A6NE52 1622 aa11.59□□□□□ -0.55
PTPRT-208ENST00000485499 STK25O00506 426 aa11.58□□□□□ -0.56
PTPRT-208ENST00000485499 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.58□□□□□ -0.56
PTPRT-208ENST00000485499 GAPVD1Q14C86 1478 aa11.57□□□□□ -0.56
PTPRT-208ENST00000485499 GOLGA2Q08379 1002 aa11.57□□□□□ -0.56
PTPRT-208ENST00000485499 HS6ST3Q8IZP7 471 aa11.57□□□□□ -0.56
PTPRT-208ENST00000485499 POLA1P09884 1462 aaPredicted RBP11.57□□□□□ -0.56
PTPRT-208ENST00000485499 BCL11BQ9C0K0 894 aaPredicted RBP11.56□□□□□ -0.56
PTPRT-208ENST00000485499 STK24Q9Y6E0 443 aa11.54□□□□□ -0.56
PTPRT-208ENST00000485499 MAGI1Q96QZ7 1491 aaPredicted RBP11.53□□□□□ -0.56
PTPRT-208ENST00000485499 CHGAP10645 457 aaKnown RBP11.53□□□□□ -0.56
PTPRT-208ENST00000485499 TSPOAP1O95153 1857 aa11.53□□□□□ -0.56
PTPRT-208ENST00000485499 CABP2Q9NPB3 220 aa11.52□□□□□ -0.57
PTPRT-208ENST00000485499 MYT1LQ9UL68 1186 aa11.52□□□□□ -0.57
PTPRT-208ENST00000485499 ERCC6L2Q5T890 1561 aa11.52□□□□□ -0.57
PTPRT-208ENST00000485499 RAD54L2Q9Y4B4 1467 aa11.51□□□□□ -0.57
PTPRT-208ENST00000485499 ERBB3P21860 1342 aa11.51□□□□□ -0.57
PTPRT-208ENST00000485499 CCDC88BA6NC98 1476 aa11.49□□□□□ -0.57
PTPRT-208ENST00000485499 SYNJ2O15056 1496 aa11.49□□□□□ -0.57
PTPRT-208ENST00000485499 ZNF710Q8N1W2 664 aa11.48□□□□□ -0.57
PTPRT-208ENST00000485499 KDM6BO15054 1643 aa11.47□□□□□ -0.57
PTPRT-208ENST00000485499 TDRD9Q8NDG6 1382 aaKnown RBP11.47□□□□□ -0.57
PTPRT-208ENST00000485499 DOK7Q18PE1 504 aa11.47□□□□□ -0.57
PTPRT-208ENST00000485499 DPY19L2Q6NUT2 758 aa11.47□□□□□ -0.57
PTPRT-208ENST00000485499 SOX12O15370 315 aa11.46□□□□□ -0.57
PTPRT-208ENST00000485499 EFCAB3Q8N7B9 438 aa11.45□□□□□ -0.58
PTPRT-208ENST00000485499 CHMP7Q8WUX9 453 aaPredicted RBP11.45□□□□□ -0.58
PTPRT-208ENST00000485499 BOLA1Q9Y3E2 137 aa11.45□□□□□ -0.58
PTPRT-208ENST00000485499 GRIN2BQ13224 1484 aa11.44□□□□□ -0.58
PTPRT-208ENST00000485499 FGD5Q6ZNL6 1462 aa11.44□□□□□ -0.58
PTPRT-208ENST00000485499 CEP170Q5SW79 1584 aa11.43□□□□□ -0.58
PTPRT-208ENST00000485499 PTGER2P43116 358 aa11.43□□□□□ -0.58
PTPRT-208ENST00000485499 SOGA1O94964 1423 aa11.43□□□□□ -0.58
PTPRT-208ENST00000485499 SHROOM2Q13796 1616 aa11.42□□□□□ -0.58
PTPRT-208ENST00000485499 VARS2Q5ST30 1063 aaKnown RBP11.41□□□□□ -0.58
PTPRT-208ENST00000485499 ABCA5Q8WWZ7 1642 aa11.41□□□□□ -0.58
PTPRT-208ENST00000485499 DIP2BQ9P265 1576 aa11.41□□□□□ -0.58
PTPRT-208ENST00000485499 G3V3G9 751 aa11.4□□□□□ -0.58
PTPRT-208ENST00000485499 ZNF687Q8N1G0 1237 aa11.4□□□□□ -0.58
PTPRT-208ENST00000485499 BBXQ8WY36 941 aaPredicted RBP11.39□□□□□ -0.59
PTPRT-208ENST00000485499 RYDENQ9NUL5 291 aaKnown RBP11.39□□□□□ -0.59
PTPRT-208ENST00000485499 HECW2Q9P2P5 1572 aa11.39□□□□□ -0.59
PTPRT-208ENST00000485499 KDM4FA0A1W2PPD8 638 aa11.38□□□□□ -0.59
PTPRT-208ENST00000485499 RIMBP2O15034 1052 aa11.38□□□□□ -0.59
PTPRT-208ENST00000485499 NLRP6P59044 892 aa11.38□□□□□ -0.59
PTPRT-208ENST00000485499 ZSWIM6Q9HCJ5 1215 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms