RNA–Protein interactions for RNA: ENST00000485499.1

PTPRT-208, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

TSL 3

Gene PTPRT, Length 208 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-208ENST00000485499 AEBP2Q6ZN18 517 aaPredicted RBP26.61■■□□□ 1.85
PTPRT-208ENST00000485499 CHIC1Q5VXU3 224 aa24.87■■□□□ 1.57
PTPRT-208ENST00000485499 SENP3Q9H4L4 574 aaPredicted RBP22.84■■□□□ 1.25
PTPRT-208ENST00000485499 PHF23Q9BUL5 403 aaPredicted RBP22.43■■□□□ 1.18
PTPRT-208ENST00000485499 FOXD1Q16676 465 aa21.35■■□□□ 1.01
PTPRT-208ENST00000485499 POTEDQ86YR6 584 aa20.98■□□□□ 0.95
PTPRT-208ENST00000485499 MSH5O43196 834 aa20.29■□□□□ 0.84
PTPRT-208ENST00000485499 PIAS4Q8N2W9 510 aaPredicted RBP19.73■□□□□ 0.75
PTPRT-208ENST00000485499 PPP6R1Q9UPN7 881 aa19.41■□□□□ 0.7
PTPRT-208ENST00000485499 PLPPR3Q6T4P5 718 aa19.33■□□□□ 0.68
PTPRT-208ENST00000485499 ADRA2BP18089 450 aa19.28■□□□□ 0.68
PTPRT-208ENST00000485499 DMRT2Q9Y5R5 561 aa18.01■□□□□ 0.47
PTPRT-208ENST00000485499 MAPK8IP2Q13387 824 aaPredicted RBP17.92■□□□□ 0.46
PTPRT-208ENST00000485499 CACNB1Q02641 598 aaPredicted RBP17.79■□□□□ 0.44
PTPRT-208ENST00000485499 SCAF1Q9H7N4 1312 aaKnown RBP17.71■□□□□ 0.42
PTPRT-208ENST00000485499 RNF39Q9H2S5 420 aa17.25■□□□□ 0.35
PTPRT-208ENST00000485499 DCAF8L1A6NGE4 600 aa17.16■□□□□ 0.34
PTPRT-208ENST00000485499 HOXD11P31277 338 aaPredicted RBP17.1■□□□□ 0.33
PTPRT-208ENST00000485499 C1QBPQ07021 282 aaKnown RBP16.97■□□□□ 0.31
PTPRT-208ENST00000485499 PPP4R3CPQ6ZMV5 832 aa16.83■□□□□ 0.28
PTPRT-208ENST00000485499 RNF216Q9NWF9 866 aaPredicted RBP16.76■□□□□ 0.27
PTPRT-208ENST00000485499 DNAJC5BQ9UF47 199 aa16.74■□□□□ 0.27
PTPRT-208ENST00000485499 CNKSR2Q8WXI2 1034 aa16.71■□□□□ 0.27
PTPRT-208ENST00000485499 POTEHQ6S545 545 aa16.3■□□□□ 0.2
PTPRT-208ENST00000485499 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.2■□□□□ 0.18
PTPRT-208ENST00000485499 NCBP3Q53F19 620 aaKnown RBP16.07■□□□□ 0.16
PTPRT-208ENST00000485499 KCNA4P22459 653 aa15.96■□□□□ 0.15
PTPRT-208ENST00000485499 DSG3P32926 999 aa15.89■□□□□ 0.13
PTPRT-208ENST00000485499 U3KPZ7 1027 aaPredicted RBP15.81■□□□□ 0.12
PTPRT-208ENST00000485499 SPINK5Q9NQ38 1064 aaPredicted RBP15.76■□□□□ 0.11
PTPRT-208ENST00000485499 NPM3O75607 178 aaKnown RBP15.75■□□□□ 0.11
PTPRT-208ENST00000485499 CAPN15O75808 1086 aa15.74■□□□□ 0.11
PTPRT-208ENST00000485499 NISCHQ9Y2I1 1504 aa15.58■□□□□ 0.09
PTPRT-208ENST00000485499 ZNF219Q9P2Y4 722 aaPredicted RBP15.33■□□□□ 0.04
PTPRT-208ENST00000485499 APLP2Q06481 763 aa15.32■□□□□ 0.04
PTPRT-208ENST00000485499 TRHP20396 242 aaPredicted RBP15.31■□□□□ 0.04
PTPRT-208ENST00000485499 ABCB7O75027 752 aa15.29■□□□□ 0.04
PTPRT-208ENST00000485499 SLC4A2P04920 1241 aa15.23■□□□□ 0.03
PTPRT-208ENST00000485499 SLC4A1APQ9BWU0 796 aaKnown RBP15.23■□□□□ 0.03
PTPRT-208ENST00000485499 RBM42Q9BTD8 480 aaKnown RBP15.2■□□□□ 0.02
PTPRT-208ENST00000485499 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.15■□□□□ 0.02
PTPRT-208ENST00000485499 HNRNPUL2Q1KMD3 747 aaKnown RBP15.15■□□□□ 0.02
PTPRT-208ENST00000485499 CHRDL2Q6WN34 429 aa15.12■□□□□ 0.01
PTPRT-208ENST00000485499 SAMD1Q6SPF0 538 aaPredicted RBP15.02■□□□□ -0
PTPRT-208ENST00000485499 SP7Q8TDD2 431 aaPredicted RBP14.95□□□□□ -0.02
PTPRT-208ENST00000485499 ABCC9O60706 1549 aa14.8□□□□□ -0.04
PTPRT-208ENST00000485499 POLA2Q14181 598 aa14.78□□□□□ -0.04
PTPRT-208ENST00000485499 FOXD4L1Q9NU39 408 aa14.76□□□□□ -0.05
PTPRT-208ENST00000485499 AKT1S1Q96B36 256 aa14.7□□□□□ -0.06
PTPRT-208ENST00000485499 EHMT2Q96KQ7 1210 aa14.67□□□□□ -0.06
PTPRT-208ENST00000485499 ZBTB22O15209 634 aa14.66□□□□□ -0.06
PTPRT-208ENST00000485499 MYCNP04198 464 aaPredicted RBP14.61□□□□□ -0.07
PTPRT-208ENST00000485499 PIP4P2Q8N4L2 257 aa14.61□□□□□ -0.07
PTPRT-208ENST00000485499 CSRNP3Q8WYN3 585 aa14.57□□□□□ -0.08
PTPRT-208ENST00000485499 REM2Q8IYK8 340 aaPredicted RBP14.54□□□□□ -0.08
PTPRT-208ENST00000485499 HAX1O00165 279 aa14.5□□□□□ -0.09
PTPRT-208ENST00000485499 ZBTB12Q9Y330 459 aaPredicted RBP14.48□□□□□ -0.09
PTPRT-208ENST00000485499 FXR2P51116 673 aaKnown RBP eCLIP14.44□□□□□ -0.1
PTPRT-208ENST00000485499 CCDC180Q9P1Z9 1646 aa14.43□□□□□ -0.1
PTPRT-208ENST00000485499 PITPNM1O00562 1244 aa14.37□□□□□ -0.11
PTPRT-208ENST00000485499 ATXN8OSP0DMR3 200 aa14.32□□□□□ -0.12
PTPRT-208ENST00000485499 OSCARQ8IYS5 282 aa14.3□□□□□ -0.12
PTPRT-208ENST00000485499 EVX2Q03828 476 aa14.29□□□□□ -0.12
PTPRT-208ENST00000485499 ATF5Q9Y2D1 282 aaPredicted RBP14.27□□□□□ -0.13
PTPRT-208ENST00000485499 C19orf67A6NJJ6 358 aa14.01□□□□□ -0.17
PTPRT-208ENST00000485499 LHX8Q68G74 356 aa14□□□□□ -0.17
PTPRT-208ENST00000485499 PRKAR2AP13861 404 aaKnown RBP13.98□□□□□ -0.17
PTPRT-208ENST00000485499 SPDYE2BA6NHP3 402 aa13.97□□□□□ -0.17
PTPRT-208ENST00000485499 SPDYE6P0CI01 402 aa13.97□□□□□ -0.17
PTPRT-208ENST00000485499 SPDYE2Q495Y8 402 aa13.97□□□□□ -0.17
PTPRT-208ENST00000485499 GABBR2O75899 941 aa13.95□□□□□ -0.18
PTPRT-208ENST00000485499 RB1CC1Q8TDY2 1594 aa13.9□□□□□ -0.18
PTPRT-208ENST00000485499 SPDYE1Q8NFV5 336 aaPredicted RBP13.88□□□□□ -0.19
PTPRT-208ENST00000485499 UNC13AQ9UPW8 1703 aa13.84□□□□□ -0.19
PTPRT-208ENST00000485499 CLEC11AQ9Y240 323 aa13.81□□□□□ -0.2
PTPRT-208ENST00000485499 FBLN2P98095 1184 aa13.77□□□□□ -0.21
PTPRT-208ENST00000485499 SSUH2Q9Y2M2 353 aa13.71□□□□□ -0.21
PTPRT-208ENST00000485499 POTEIP0CG38 1075 aa13.65□□□□□ -0.22
PTPRT-208ENST00000485499 ZNF692Q9BU19 519 aaPredicted RBP13.64□□□□□ -0.23
PTPRT-208ENST00000485499 CHADLQ6NUI6 762 aa13.63□□□□□ -0.23
PTPRT-208ENST00000485499 NACADO15069 1562 aa13.62□□□□□ -0.23
PTPRT-208ENST00000485499 PLSCR2Q9NRY7 297 aa13.61□□□□□ -0.23
PTPRT-208ENST00000485499 MKRN4PQ13434 485 aaPredicted RBP13.6□□□□□ -0.23
PTPRT-208ENST00000485499 CLCN6P51797 869 aa13.58□□□□□ -0.24
PTPRT-208ENST00000485499 PABPN1Q86U42 306 aaKnown RBP eCLIP13.56□□□□□ -0.24
PTPRT-208ENST00000485499 PRR29P0C7W0 189 aa13.54□□□□□ -0.24
PTPRT-208ENST00000485499 BICRAQ9NZM4 1560 aa13.51□□□□□ -0.25
PTPRT-208ENST00000485499 CD44P16070 742 aaKnown RBP13.49□□□□□ -0.25
PTPRT-208ENST00000485499 DNAJC5Q9H3Z4 198 aa13.44□□□□□ -0.26
PTPRT-208ENST00000485499 FARP1Q9Y4F1 1045 aaPredicted RBP13.43□□□□□ -0.26
PTPRT-208ENST00000485499 CC2D2AQ9P2K1 1620 aa13.42□□□□□ -0.26
PTPRT-208ENST00000485499 DCBLD2Q96PD2 775 aa13.39□□□□□ -0.27
PTPRT-208ENST00000485499 CECR2Q9BXF3 1484 aa13.36□□□□□ -0.27
PTPRT-208ENST00000485499 ZNF579Q8NAF0 562 aaKnown RBP13.3□□□□□ -0.28
PTPRT-208ENST00000485499 OTUD5Q96G74 571 aa13.28□□□□□ -0.28
PTPRT-208ENST00000485499 DCAF8L2P0C7V8 631 aa13.27□□□□□ -0.29
PTPRT-208ENST00000485499 SPDYE4A6NLX3 237 aa13.24□□□□□ -0.29
PTPRT-208ENST00000485499 EIF4G1Q04637 1599 aaKnown RBP13.23□□□□□ -0.29
PTPRT-208ENST00000485499 SHROOM4Q9ULL8 1493 aa13.21□□□□□ -0.3
PTPRT-208ENST00000485499 POTEMA6NI47 508 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms