RNA–Protein interactions for RNA: ENST00000481422.5

ARHGEF3-210, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 4

Gene ARHGEF3, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-210ENST00000481422 CUX2O14529 1486 aa6.95□□□□□ -1.3
ARHGEF3-210ENST00000481422 TRIM26Q12899 539 aaPredicted RBP6.93□□□□□ -1.3
ARHGEF3-210ENST00000481422 MKRN3Q13064 507 aaKnown RBP6.93□□□□□ -1.3
ARHGEF3-210ENST00000481422 SYNJ1O43426 1573 aa6.92□□□□□ -1.3
ARHGEF3-210ENST00000481422 GOLGA2Q08379 1002 aa6.92□□□□□ -1.3
ARHGEF3-210ENST00000481422 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.92□□□□□ -1.3
ARHGEF3-210ENST00000481422 BIVM-ERCC5R4GMW8 1640 aa6.91□□□□□ -1.3
ARHGEF3-210ENST00000481422 HOXB3P14651 431 aaPredicted RBP6.91□□□□□ -1.3
ARHGEF3-210ENST00000481422 RNF166Q96A37 237 aaPredicted RBP6.91□□□□□ -1.3
ARHGEF3-210ENST00000481422 TOP2BQ02880 1626 aa6.9□□□□□ -1.3
ARHGEF3-210ENST00000481422 SOGA1O94964 1423 aa6.9□□□□□ -1.31
ARHGEF3-210ENST00000481422 HRCP23327 699 aa6.89□□□□□ -1.31
ARHGEF3-210ENST00000481422 DPY19L2Q6NUT2 758 aa6.89□□□□□ -1.31
ARHGEF3-210ENST00000481422 ILDR1Q86SU0 546 aaPredicted RBP6.89□□□□□ -1.31
ARHGEF3-210ENST00000481422 KIF21BO75037 1637 aa6.88□□□□□ -1.31
ARHGEF3-210ENST00000481422 HOXB1P14653 301 aaPredicted RBP6.88□□□□□ -1.31
ARHGEF3-210ENST00000481422 ZNF467Q7Z7K2 595 aaPredicted RBP6.88□□□□□ -1.31
ARHGEF3-210ENST00000481422 GOLGA3Q08378 1498 aa6.87□□□□□ -1.31
ARHGEF3-210ENST00000481422 ERCC6Q03468 1493 aa6.86□□□□□ -1.31
ARHGEF3-210ENST00000481422 TNIKQ9UKE5 1360 aa6.86□□□□□ -1.31
ARHGEF3-210ENST00000481422 ERBB3P21860 1342 aa6.86□□□□□ -1.31
ARHGEF3-210ENST00000481422 RUSC2Q8N2Y8 1516 aa6.86□□□□□ -1.31
ARHGEF3-210ENST00000481422 CFTRP13569 1480 aa6.85□□□□□ -1.31
ARHGEF3-210ENST00000481422 CEP164Q9UPV0 1460 aa6.85□□□□□ -1.31
ARHGEF3-210ENST00000481422 PSEN1P49768 467 aa6.85□□□□□ -1.31
ARHGEF3-210ENST00000481422 ZNF710Q8N1W2 664 aa6.84□□□□□ -1.31
ARHGEF3-210ENST00000481422 MYT1LQ9UL68 1186 aa6.84□□□□□ -1.31
ARHGEF3-210ENST00000481422 CEP162Q5TB80 1403 aa6.84□□□□□ -1.32
ARHGEF3-210ENST00000481422 UBTFP17480 764 aaKnown RBP6.83□□□□□ -1.32
ARHGEF3-210ENST00000481422 BOLA1Q9Y3E2 137 aa6.83□□□□□ -1.32
ARHGEF3-210ENST00000481422 VARS2Q5ST30 1063 aaKnown RBP6.82□□□□□ -1.32
ARHGEF3-210ENST00000481422 CUX1P39880 1505 aa6.81□□□□□ -1.32
ARHGEF3-210ENST00000481422 GSE1Q14687 1217 aa6.81□□□□□ -1.32
ARHGEF3-210ENST00000481422 DOK7Q18PE1 504 aa6.81□□□□□ -1.32
ARHGEF3-210ENST00000481422 CHRM1P11229 460 aaPredicted RBP6.8□□□□□ -1.32
ARHGEF3-210ENST00000481422 CADPSQ9ULU8 1353 aa6.8□□□□□ -1.32
ARHGEF3-210ENST00000481422 G3V3G9 751 aa6.79□□□□□ -1.32
ARHGEF3-210ENST00000481422 ERICH3Q5RHP9 1530 aa6.79□□□□□ -1.32
ARHGEF3-210ENST00000481422 THOC2Q8NI27 1593 aaKnown RBP6.78□□□□□ -1.32
ARHGEF3-210ENST00000481422 ZEB1P37275 1124 aaPredicted RBP6.78□□□□□ -1.32
ARHGEF3-210ENST00000481422 CABP2Q9NPB3 220 aa6.78□□□□□ -1.32
ARHGEF3-210ENST00000481422 KIF27Q86VH2 1401 aa6.77□□□□□ -1.33
ARHGEF3-210ENST00000481422 NESP48681 1621 aa6.77□□□□□ -1.33
ARHGEF3-210ENST00000481422 FKBP8Q14318 412 aa6.77□□□□□ -1.33
ARHGEF3-210ENST00000481422 ZNF687Q8N1G0 1237 aa6.77□□□□□ -1.33
ARHGEF3-210ENST00000481422 PDAP1Q13442 181 aaKnown RBP6.76□□□□□ -1.33
ARHGEF3-210ENST00000481422 RAPGEF2Q9Y4G8 1499 aa6.76□□□□□ -1.33
ARHGEF3-210ENST00000481422 CLIP1P30622 1438 aa6.76□□□□□ -1.33
ARHGEF3-210ENST00000481422 RIMBP2O15034 1052 aa6.75□□□□□ -1.33
ARHGEF3-210ENST00000481422 LAMC3Q9Y6N6 1575 aa6.74□□□□□ -1.33
ARHGEF3-210ENST00000481422 PRXQ9BXM0 1461 aa6.74□□□□□ -1.33
ARHGEF3-210ENST00000481422 FANCD2Q9BXW9 1451 aa6.73□□□□□ -1.33
ARHGEF3-210ENST00000481422 KLHL34Q8N239 644 aa6.73□□□□□ -1.33
ARHGEF3-210ENST00000481422 DNMBPQ6XZF7 1577 aa6.73□□□□□ -1.33
ARHGEF3-210ENST00000481422 FGD5Q6ZNL6 1462 aa6.73□□□□□ -1.33
ARHGEF3-210ENST00000481422 PTGER2P43116 358 aa6.72□□□□□ -1.33
ARHGEF3-210ENST00000481422 GPR153Q6NV75 609 aa6.72□□□□□ -1.33
ARHGEF3-210ENST00000481422 TMEM92Q6UXU6 159 aa6.72□□□□□ -1.33
ARHGEF3-210ENST00000481422 PPARGC1BQ86YN6 1023 aaKnown RBP6.72□□□□□ -1.33
ARHGEF3-210ENST00000481422 VPS8Q8N3P4 1428 aa6.72□□□□□ -1.33
ARHGEF3-210ENST00000481422 ZSWIM6Q9HCJ5 1215 aa6.71□□□□□ -1.34
ARHGEF3-210ENST00000481422 KIF21AQ7Z4S6 1674 aa6.71□□□□□ -1.34
ARHGEF3-210ENST00000481422 ANKRD13DQ6ZTN6 518 aa6.7□□□□□ -1.34
ARHGEF3-210ENST00000481422 FBXO3Q9UK99 471 aa6.7□□□□□ -1.34
ARHGEF3-210ENST00000481422 TOPBP1Q92547 1522 aa6.68□□□□□ -1.34
ARHGEF3-210ENST00000481422 VASPP50552 380 aaPredicted RBP6.68□□□□□ -1.34
ARHGEF3-210ENST00000481422 CUL7Q14999 1698 aa6.68□□□□□ -1.34
ARHGEF3-210ENST00000481422 MICALL2Q8IY33 904 aa6.67□□□□□ -1.34
ARHGEF3-210ENST00000481422 WDR97A6NE52 1622 aa6.67□□□□□ -1.34
ARHGEF3-210ENST00000481422 PDS5BQ9NTI5 1447 aa6.67□□□□□ -1.34
ARHGEF3-210ENST00000481422 ABCA10Q8WWZ4 1543 aa6.66□□□□□ -1.34
ARHGEF3-210ENST00000481422 EFCAB3Q8N7B9 438 aa6.66□□□□□ -1.34
ARHGEF3-210ENST00000481422 IGF1RP08069 1367 aa6.66□□□□□ -1.34
ARHGEF3-210ENST00000481422 POLA1P09884 1462 aaPredicted RBP6.66□□□□□ -1.34
ARHGEF3-210ENST00000481422 ARAP1Q96P48 1450 aa6.66□□□□□ -1.34
ARHGEF3-210ENST00000481422 CTTNBP2Q8WZ74 1663 aa6.65□□□□□ -1.34
ARHGEF3-210ENST00000481422 RANGAP1P46060 587 aaPredicted RBP6.65□□□□□ -1.34
ARHGEF3-210ENST00000481422 ARSIQ5FYB1 569 aa6.65□□□□□ -1.34
ARHGEF3-210ENST00000481422 TTBK1Q5TCY1 1321 aaPredicted RBP6.65□□□□□ -1.35
ARHGEF3-210ENST00000481422 CARMIL1Q5VZK9 1371 aa6.65□□□□□ -1.35
ARHGEF3-210ENST00000481422 LSM11P83369 360 aaKnown RBP eCLIP6.64□□□□□ -1.35
ARHGEF3-210ENST00000481422 PLA2G2EQ9NZK7 142 aa6.64□□□□□ -1.35
ARHGEF3-210ENST00000481422 ZNF316A6NFI3 1004 aaPredicted RBP6.63□□□□□ -1.35
ARHGEF3-210ENST00000481422 WDR62O43379 1518 aa6.63□□□□□ -1.35
ARHGEF3-210ENST00000481422 URB2Q14146 1524 aaKnown RBP6.63□□□□□ -1.35
ARHGEF3-210ENST00000481422 CCER1Q8TC90 406 aaPredicted RBP6.63□□□□□ -1.35
ARHGEF3-210ENST00000481422 KHSRPQ92945 711 aaKnown RBP eCLIP6.63□□□□□ -1.35
ARHGEF3-210ENST00000481422 ABCA5Q8WWZ7 1642 aa6.62□□□□□ -1.35
ARHGEF3-210ENST00000481422 ARHGAP35Q9NRY4 1499 aa6.62□□□□□ -1.35
ARHGEF3-210ENST00000481422 RAD54L2Q9Y4B4 1467 aa6.62□□□□□ -1.35
ARHGEF3-210ENST00000481422 CIZ1Q9ULV3 898 aaPredicted RBP6.62□□□□□ -1.35
ARHGEF3-210ENST00000481422 MRC2Q9UBG0 1479 aa6.61□□□□□ -1.35
ARHGEF3-210ENST00000481422 EFCAB5A4FU69 1503 aa6.6□□□□□ -1.35
ARHGEF3-210ENST00000481422 MAP3K1Q13233 1512 aa6.6□□□□□ -1.35
ARHGEF3-210ENST00000481422 PBRM1Q86U86 1689 aa6.59□□□□□ -1.35
ARHGEF3-210ENST00000481422 MS4A4AQ96JQ5 239 aa6.59□□□□□ -1.35
ARHGEF3-210ENST00000481422 FHAD1B1AJZ9 1412 aa6.59□□□□□ -1.36
ARHGEF3-210ENST00000481422 TARBP1Q13395 1621 aaKnown RBP6.58□□□□□ -1.36
ARHGEF3-210ENST00000481422 POTEEQ6S8J3 1075 aa6.58□□□□□ -1.36
ARHGEF3-210ENST00000481422 GAPVD1Q14C86 1478 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms