RNA–Protein interactions for RNA: ENST00000458034.1

RFX3-211, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-211ENST00000458034 DISP1Q96F81 1524 aa15.51■□□□□ 0.07
RFX3-211ENST00000458034 DNMT1P26358 1616 aaKnown RBP15.5■□□□□ 0.07
RFX3-211ENST00000458034 POTEHQ6S545 545 aa15.5■□□□□ 0.07
RFX3-211ENST00000458034 ROCK1Q13464 1354 aa15.49■□□□□ 0.07
RFX3-211ENST00000458034 ERCC6Q03468 1493 aa15.48■□□□□ 0.07
RFX3-211ENST00000458034 CDK11AQ9UQ88 783 aaPredicted RBP15.48■□□□□ 0.07
RFX3-211ENST00000458034 CCER2I3L3R5 266 aa15.46■□□□□ 0.07
RFX3-211ENST00000458034 DDX10Q13206 875 aaKnown RBP15.46■□□□□ 0.07
RFX3-211ENST00000458034 ADGBQ8N7X0 1667 aa15.46■□□□□ 0.07
RFX3-211ENST00000458034 ADCY10Q96PN6 1610 aa15.46■□□□□ 0.06
RFX3-211ENST00000458034 SYNJ2O15056 1496 aa15.46■□□□□ 0.06
RFX3-211ENST00000458034 NUP153P49790 1475 aaKnown RBP15.45■□□□□ 0.06
RFX3-211ENST00000458034 DAPK1P53355 1430 aa15.44■□□□□ 0.06
RFX3-211ENST00000458034 ANP32CO43423 234 aa15.44■□□□□ 0.06
RFX3-211ENST00000458034 RRP7BPQ9NSQ0 103 aa15.43■□□□□ 0.06
RFX3-211ENST00000458034 KDM5BQ9UGL1 1544 aa15.42■□□□□ 0.06
RFX3-211ENST00000458034 CARMIL2Q6F5E8 1435 aa15.42■□□□□ 0.06
RFX3-211ENST00000458034 CEP170Q5SW79 1584 aa15.41■□□□□ 0.06
RFX3-211ENST00000458034 TRIM52Q96A61 297 aa15.41■□□□□ 0.06
RFX3-211ENST00000458034 KDM6BO15054 1643 aa15.41■□□□□ 0.06
RFX3-211ENST00000458034 TROQ12816 1431 aaPredicted RBP15.41■□□□□ 0.06
RFX3-211ENST00000458034 CROCC2H7BZ55 1655 aa15.39■□□□□ 0.05
RFX3-211ENST00000458034 CHIC2Q9UKJ5 165 aa15.39■□□□□ 0.05
RFX3-211ENST00000458034 ABCC5O15440 1437 aa15.38■□□□□ 0.05
RFX3-211ENST00000458034 NPM3O75607 178 aaKnown RBP15.38■□□□□ 0.05
RFX3-211ENST00000458034 NUP160Q12769 1436 aa15.36■□□□□ 0.05
RFX3-211ENST00000458034 DENND4BO75064 1496 aaPredicted RBP15.36■□□□□ 0.05
RFX3-211ENST00000458034 CHMP7Q8WUX9 453 aaPredicted RBP15.36■□□□□ 0.05
RFX3-211ENST00000458034 MPHOSPH9Q99550 1183 aa15.36■□□□□ 0.05
RFX3-211ENST00000458034 CAMSAP2Q08AD1 1489 aa15.35■□□□□ 0.05
RFX3-211ENST00000458034 SUPT16HQ9Y5B9 1047 aaKnown RBP15.35■□□□□ 0.05
RFX3-211ENST00000458034 POLR1AO95602 1720 aaPredicted RBP15.33■□□□□ 0.04
RFX3-211ENST00000458034 ADGRL2O95490 1459 aa15.33■□□□□ 0.04
RFX3-211ENST00000458034 KIF14Q15058 1648 aa15.32■□□□□ 0.04
RFX3-211ENST00000458034 RPRD2Q5VT52 1461 aaKnown RBP15.32■□□□□ 0.04
RFX3-211ENST00000458034 ARID3CA6NKF2 412 aa15.31■□□□□ 0.04
RFX3-211ENST00000458034 DSG3P32926 999 aa15.31■□□□□ 0.04
RFX3-211ENST00000458034 U3KPZ7 1027 aaPredicted RBP15.31■□□□□ 0.04
RFX3-211ENST00000458034 ABCA8O94911 1581 aa15.31■□□□□ 0.04
RFX3-211ENST00000458034 EIF4G2P78344 907 aaKnown RBP eCLIP15.3■□□□□ 0.04
RFX3-211ENST00000458034 GPATCH8Q9UKJ3 1502 aaKnown RBP15.29■□□□□ 0.04
RFX3-211ENST00000458034 PLB1Q6P1J6 1458 aa15.29■□□□□ 0.04
RFX3-211ENST00000458034 PRG4Q92954 1404 aaPredicted RBP15.29■□□□□ 0.04
RFX3-211ENST00000458034 ANKRD30BQ9BXX2 1392 aa15.29■□□□□ 0.04
RFX3-211ENST00000458034 HIRIP3Q9BW71 556 aaPredicted RBP15.29■□□□□ 0.04
RFX3-211ENST00000458034 CDC42BPAQ5VT25 1732 aa15.29■□□□□ 0.04
RFX3-211ENST00000458034 KCNH8Q96L42 1107 aa15.28■□□□□ 0.04
RFX3-211ENST00000458034 CFDP1Q9UEE9 299 aaPredicted RBP15.28■□□□□ 0.04
RFX3-211ENST00000458034 SHANK2Q9UPX8 1470 aa15.27■□□□□ 0.04
RFX3-211ENST00000458034 HSPA5P11021 654 aaKnown RBP15.27■□□□□ 0.04
RFX3-211ENST00000458034 SPINK5Q9NQ38 1064 aaPredicted RBP15.27■□□□□ 0.04
RFX3-211ENST00000458034 TEX14Q8IWB6 1497 aa15.27■□□□□ 0.03
RFX3-211ENST00000458034 ANKRD30AQ9BXX3 1397 aa15.25■□□□□ 0.03
RFX3-211ENST00000458034 CAPN15O75808 1086 aa15.25■□□□□ 0.03
RFX3-211ENST00000458034 NEFLP07196 543 aa15.25■□□□□ 0.03
RFX3-211ENST00000458034 JPH4Q96JJ6 628 aa15.25■□□□□ 0.03
RFX3-211ENST00000458034 NCOA1Q15788 1441 aa15.25■□□□□ 0.03
RFX3-211ENST00000458034 CNTLNQ9NXG0 1405 aa15.25■□□□□ 0.03
RFX3-211ENST00000458034 MYT1Q01538 1121 aa15.24■□□□□ 0.03
RFX3-211ENST00000458034 SLC4A1APQ9BWU0 796 aaKnown RBP15.24■□□□□ 0.03
RFX3-211ENST00000458034 PZPP20742 1482 aa15.24■□□□□ 0.03
RFX3-211ENST00000458034 L3MBTL2Q969R5 705 aa15.23■□□□□ 0.03
RFX3-211ENST00000458034 ZNF644Q9H582 1327 aaPredicted RBP15.22■□□□□ 0.03
RFX3-211ENST00000458034 PLEKHD1A6NEE1 506 aa15.22■□□□□ 0.03
RFX3-211ENST00000458034 FBLN2P98095 1184 aa15.22■□□□□ 0.03
RFX3-211ENST00000458034 KIAA1107Q9UPP5 1409 aa15.22■□□□□ 0.03
RFX3-211ENST00000458034 ABCC10Q5T3U5 1492 aa15.21■□□□□ 0.03
RFX3-211ENST00000458034 ARHGEF5Q12774 1597 aa15.21■□□□□ 0.03
RFX3-211ENST00000458034 WASHC2AQ641Q2 1341 aa15.19■□□□□ 0.02
RFX3-211ENST00000458034 KDM5DQ9BY66 1539 aa15.19■□□□□ 0.02
RFX3-211ENST00000458034 ATP10BO94823 1461 aa15.19■□□□□ 0.02
RFX3-211ENST00000458034 CCDC7Q96M83 1385 aa15.18■□□□□ 0.02
RFX3-211ENST00000458034 C9orf84Q5VXU9 1444 aa15.17■□□□□ 0.02
RFX3-211ENST00000458034 ANKRD50Q9ULJ7 1429 aa15.17■□□□□ 0.02
RFX3-211ENST00000458034 MBD5Q9P267 1494 aa15.16■□□□□ 0.02
RFX3-211ENST00000458034 ZNF777Q9ULD5 760 aaPredicted RBP15.16■□□□□ 0.02
RFX3-211ENST00000458034 PREX2Q70Z35 1606 aa15.16■□□□□ 0.02
RFX3-211ENST00000458034 CHD1O14646 1710 aa15.14■□□□□ 0.01
RFX3-211ENST00000458034 ARHGEF12Q9NZN5 1544 aa15.13■□□□□ 0.01
RFX3-211ENST00000458034 FKBP8Q14318 412 aa15.13■□□□□ 0.01
RFX3-211ENST00000458034 PTPRGP23470 1445 aa15.12■□□□□ 0.01
RFX3-211ENST00000458034 SPATA31E1Q6ZUB1 1445 aa15.12■□□□□ 0.01
RFX3-211ENST00000458034 SHROOM2Q13796 1616 aa15.11■□□□□ 0.01
RFX3-211ENST00000458034 TSPY4P0CV99 314 aa15.11■□□□□ 0.01
RFX3-211ENST00000458034 TSPY10P0CW01 314 aa15.11■□□□□ 0.01
RFX3-211ENST00000458034 NBPF8Q3BBV2 869 aa15.11■□□□□ 0.01
RFX3-211ENST00000458034 CDC42BPBQ9Y5S2 1711 aa15.11■□□□□ 0.01
RFX3-211ENST00000458034 CCDC141Q6ZP82 1450 aa15.1■□□□□ 0.01
RFX3-211ENST00000458034 RSPH4AQ5TD94 716 aa15.1■□□□□ 0.01
RFX3-211ENST00000458034 MAST1Q9Y2H9 1570 aa15.1■□□□□ 0.01
RFX3-211ENST00000458034 ARID4BQ4LE39 1312 aaPredicted RBP15.09■□□□□ 0.01
RFX3-211ENST00000458034 UHRF1BP1Q6BDS2 1440 aa15.09■□□□□ 0.01
RFX3-211ENST00000458034 RALGAPBQ86X10 1494 aa15.08■□□□□ 0.01
RFX3-211ENST00000458034 KDM5CP41229 1560 aa15.08■□□□□ 0
RFX3-211ENST00000458034 SAMD9LQ8IVG5 1584 aa15.08■□□□□ 0
RFX3-211ENST00000458034 PKD2Q13563 968 aa15.08■□□□□ 0
RFX3-211ENST00000458034 MYO5CQ9NQX4 1742 aa15.07■□□□□ 0
RFX3-211ENST00000458034 HNRNPUQ00839 825 aaKnown RBP eCLIP15.07■□□□□ 0
RFX3-211ENST00000458034 NUP155O75694 1391 aa15.07■□□□□ 0
RFX3-211ENST00000458034 KIF15Q9NS87 1388 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms