RNA–Protein interactions for RNA: ENST00000446242.3

SYT1-203, Transcript of synaptotagmin 1, humanhuman

TSL 3

Gene SYT1, Length 762 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-203ENST00000446242 RIMBP3CA6NJZ7 1639 aa13.26□□□□□ -0.29
SYT1-203ENST00000446242 RIMBP3BA6NNM3 1639 aa13.26□□□□□ -0.29
SYT1-203ENST00000446242 CHRM1P11229 460 aaPredicted RBP13.26□□□□□ -0.29
SYT1-203ENST00000446242 TMEM121BQ9BXQ6 578 aaPredicted RBP13.26□□□□□ -0.29
SYT1-203ENST00000446242 RIMBP3Q9UFD9 1639 aa13.26□□□□□ -0.29
SYT1-203ENST00000446242 C3orf67Q6ZVT6 689 aa13.25□□□□□ -0.29
SYT1-203ENST00000446242 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.25□□□□□ -0.29
SYT1-203ENST00000446242 PRDM2Q13029 1718 aa13.24□□□□□ -0.29
SYT1-203ENST00000446242 ABCC8Q09428 1581 aa13.23□□□□□ -0.29
SYT1-203ENST00000446242 L3MBTL3Q96JM7 780 aaPredicted RBP13.21□□□□□ -0.29
SYT1-203ENST00000446242 DPY19L2Q6NUT2 758 aa13.2□□□□□ -0.3
SYT1-203ENST00000446242 PDS5BQ9NTI5 1447 aa13.2□□□□□ -0.3
SYT1-203ENST00000446242 WRNQ14191 1432 aaPredicted RBP eCLIP13.18□□□□□ -0.3
SYT1-203ENST00000446242 WDR62O43379 1518 aa13.17□□□□□ -0.3
SYT1-203ENST00000446242 CIZ1Q9ULV3 898 aaPredicted RBP13.16□□□□□ -0.3
SYT1-203ENST00000446242 IFNLR1Q8IU57 520 aaPredicted RBP13.15□□□□□ -0.3
SYT1-203ENST00000446242 EMP3P54852 163 aa13.14□□□□□ -0.31
SYT1-203ENST00000446242 PDAP1Q13442 181 aaKnown RBP13.14□□□□□ -0.31
SYT1-203ENST00000446242 CABP2Q9NPB3 220 aa13.14□□□□□ -0.31
SYT1-203ENST00000446242 MRC2Q9UBG0 1479 aa13.13□□□□□ -0.31
SYT1-203ENST00000446242 POTEB3A0JP26 581 aa13.13□□□□□ -0.31
SYT1-203ENST00000446242 POTEBQ6S5H4 581 aa13.13□□□□□ -0.31
SYT1-203ENST00000446242 SYNJ1O43426 1573 aa13.12□□□□□ -0.31
SYT1-203ENST00000446242 FANCD2Q9BXW9 1451 aa13.12□□□□□ -0.31
SYT1-203ENST00000446242 ILDR1Q86SU0 546 aaPredicted RBP13.12□□□□□ -0.31
SYT1-203ENST00000446242 SPOCK2Q92563 424 aa13.11□□□□□ -0.31
SYT1-203ENST00000446242 ARHGEF11O15085 1522 aa13.11□□□□□ -0.31
SYT1-203ENST00000446242 TOP2BQ02880 1626 aa13.1□□□□□ -0.31
SYT1-203ENST00000446242 FAM205CA6NFA0 338 aa13.09□□□□□ -0.31
SYT1-203ENST00000446242 BIVM-ERCC5R4GMW8 1640 aa13.09□□□□□ -0.31
SYT1-203ENST00000446242 HS3ST6Q96QI5 342 aa13.08□□□□□ -0.32
SYT1-203ENST00000446242 CUX1P39880 1505 aa13.08□□□□□ -0.32
SYT1-203ENST00000446242 CEP164Q9UPV0 1460 aa13.06□□□□□ -0.32
SYT1-203ENST00000446242 KRTAP3-3Q9BYR6 98 aa13.04□□□□□ -0.32
SYT1-203ENST00000446242 KRTAP3-2Q9BYR7 98 aa13.04□□□□□ -0.32
SYT1-203ENST00000446242 BOLA1Q9Y3E2 137 aa13.04□□□□□ -0.32
SYT1-203ENST00000446242 G3V3G9 751 aa13.01□□□□□ -0.33
SYT1-203ENST00000446242 DNMBPQ6XZF7 1577 aa13.01□□□□□ -0.33
SYT1-203ENST00000446242 HOXB3P14651 431 aaPredicted RBP13□□□□□ -0.33
SYT1-203ENST00000446242 TOPBP1Q92547 1522 aa12.98□□□□□ -0.33
SYT1-203ENST00000446242 URB2Q14146 1524 aaKnown RBP12.97□□□□□ -0.33
SYT1-203ENST00000446242 SOGA1O94964 1423 aa12.96□□□□□ -0.33
SYT1-203ENST00000446242 EFCAB3Q8N7B9 438 aa12.96□□□□□ -0.33
SYT1-203ENST00000446242 EEA1Q15075 1411 aa12.96□□□□□ -0.34
SYT1-203ENST00000446242 CYB5RLQ6IPT4 315 aa12.95□□□□□ -0.34
SYT1-203ENST00000446242 FAM9AQ8IZU1 332 aaPredicted RBP12.95□□□□□ -0.34
SYT1-203ENST00000446242 FGD5Q6ZNL6 1462 aa12.95□□□□□ -0.34
SYT1-203ENST00000446242 RUSC2Q8N2Y8 1516 aa12.93□□□□□ -0.34
SYT1-203ENST00000446242 POLA1P09884 1462 aaPredicted RBP12.91□□□□□ -0.34
SYT1-203ENST00000446242 ARAP1Q96P48 1450 aa12.91□□□□□ -0.34
SYT1-203ENST00000446242 ZNF710Q8N1W2 664 aa12.9□□□□□ -0.34
SYT1-203ENST00000446242 HOXB1P14653 301 aaPredicted RBP12.88□□□□□ -0.35
SYT1-203ENST00000446242 LOC105371045A0A1W2PR82 267 aa12.86□□□□□ -0.35
SYT1-203ENST00000446242 KIF27Q86VH2 1401 aa12.86□□□□□ -0.35
SYT1-203ENST00000446242 DOK7Q18PE1 504 aa12.85□□□□□ -0.35
SYT1-203ENST00000446242 ERBB3P21860 1342 aa12.85□□□□□ -0.35
SYT1-203ENST00000446242 RAD54L2Q9Y4B4 1467 aa12.85□□□□□ -0.35
SYT1-203ENST00000446242 ABCA10Q8WWZ4 1543 aa12.84□□□□□ -0.35
SYT1-203ENST00000446242 TMEM92Q6UXU6 159 aa12.84□□□□□ -0.35
SYT1-203ENST00000446242 WDR97A6NE52 1622 aa12.81□□□□□ -0.36
SYT1-203ENST00000446242 MICALL2Q8IY33 904 aa12.81□□□□□ -0.36
SYT1-203ENST00000446242 TARBP1Q13395 1621 aaKnown RBP12.8□□□□□ -0.36
SYT1-203ENST00000446242 RNF25Q96BH1 459 aaPredicted RBP12.79□□□□□ -0.36
SYT1-203ENST00000446242 KIF21BO75037 1637 aa12.79□□□□□ -0.36
SYT1-203ENST00000446242 VARS2Q5ST30 1063 aaKnown RBP12.78□□□□□ -0.36
SYT1-203ENST00000446242 MS4A4AQ96JQ5 239 aa12.78□□□□□ -0.36
SYT1-203ENST00000446242 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.76□□□□□ -0.37
SYT1-203ENST00000446242 ZFP91Q96JP5 570 aaPredicted RBP12.76□□□□□ -0.37
SYT1-203ENST00000446242 PHF8Q9UPP1 1060 aa12.76□□□□□ -0.37
SYT1-203ENST00000446242 IGF1RP08069 1367 aa12.76□□□□□ -0.37
SYT1-203ENST00000446242 GOLGA3Q08378 1498 aa12.76□□□□□ -0.37
SYT1-203ENST00000446242 IFT140Q96RY7 1462 aa12.76□□□□□ -0.37
SYT1-203ENST00000446242 PRXQ9BXM0 1461 aa12.76□□□□□ -0.37
SYT1-203ENST00000446242 RIOK3O14730 519 aaKnown RBP12.75□□□□□ -0.37
SYT1-203ENST00000446242 RIMBP2O15034 1052 aa12.75□□□□□ -0.37
SYT1-203ENST00000446242 ABCA5Q8WWZ7 1642 aa12.75□□□□□ -0.37
SYT1-203ENST00000446242 CHD1O14646 1710 aa12.74□□□□□ -0.37
SYT1-203ENST00000446242 TDRD9Q8NDG6 1382 aaKnown RBP12.73□□□□□ -0.37
SYT1-203ENST00000446242 SOX12O15370 315 aa12.73□□□□□ -0.37
SYT1-203ENST00000446242 ERICH3Q5RHP9 1530 aa12.72□□□□□ -0.37
SYT1-203ENST00000446242 GAPVD1Q14C86 1478 aa12.72□□□□□ -0.37
SYT1-203ENST00000446242 RAPGEF2Q9Y4G8 1499 aa12.71□□□□□ -0.38
SYT1-203ENST00000446242 TNIKQ9UKE5 1360 aa12.7□□□□□ -0.38
SYT1-203ENST00000446242 GPR153Q6NV75 609 aa12.7□□□□□ -0.38
SYT1-203ENST00000446242 ZNF608Q9ULD9 1512 aaPredicted RBP12.69□□□□□ -0.38
SYT1-203ENST00000446242 CUL7Q14999 1698 aa12.68□□□□□ -0.38
SYT1-203ENST00000446242 CARMIL1Q5VZK9 1371 aa12.68□□□□□ -0.38
SYT1-203ENST00000446242 VGFO15240 615 aaPredicted RBP12.67□□□□□ -0.38
SYT1-203ENST00000446242 UBTFP17480 764 aaKnown RBP12.67□□□□□ -0.38
SYT1-203ENST00000446242 RNF166Q96A37 237 aaPredicted RBP12.67□□□□□ -0.38
SYT1-203ENST00000446242 AQRO60306 1485 aaKnown RBP eCLIP12.66□□□□□ -0.38
SYT1-203ENST00000446242 ZNF687Q8N1G0 1237 aa12.66□□□□□ -0.38
SYT1-203ENST00000446242 ZSWIM6Q9HCJ5 1215 aa12.66□□□□□ -0.38
SYT1-203ENST00000446242 EIF4G3O43432 1585 aaKnown RBP12.65□□□□□ -0.38
SYT1-203ENST00000446242 PBRM1Q86U86 1689 aa12.65□□□□□ -0.38
SYT1-203ENST00000446242 ARSIQ5FYB1 569 aa12.65□□□□□ -0.38
SYT1-203ENST00000446242 GRIN2BQ13224 1484 aa12.65□□□□□ -0.38
SYT1-203ENST00000446242 KHSRPQ92945 711 aaKnown RBP eCLIP12.63□□□□□ -0.39
SYT1-203ENST00000446242 MYT1LQ9UL68 1186 aa12.61□□□□□ -0.39
SYT1-203ENST00000446242 CEP162Q5TB80 1403 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms