RNA–Protein interactions for RNA: ENST00000446242.3

SYT1-203, Transcript of synaptotagmin 1, humanhuman

TSL 3

Gene SYT1, Length 762 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-203ENST00000446242 AEBP2Q6ZN18 517 aaPredicted RBP29.36■■■□□ 2.29
SYT1-203ENST00000446242 CHIC1Q5VXU3 224 aa27.54■■■□□ 2
SYT1-203ENST00000446242 SENP3Q9H4L4 574 aaPredicted RBP24.96■■□□□ 1.59
SYT1-203ENST00000446242 PHF23Q9BUL5 403 aaPredicted RBP24.68■■□□□ 1.54
SYT1-203ENST00000446242 POTEDQ86YR6 584 aa23.68■■□□□ 1.38
SYT1-203ENST00000446242 FOXD1Q16676 465 aa23.39■■□□□ 1.33
SYT1-203ENST00000446242 MSH5O43196 834 aa21.89■■□□□ 1.09
SYT1-203ENST00000446242 PLPPR3Q6T4P5 718 aa21.85■■□□□ 1.09
SYT1-203ENST00000446242 PIAS4Q8N2W9 510 aaPredicted RBP21.77■■□□□ 1.08
SYT1-203ENST00000446242 PPP6R1Q9UPN7 881 aa21.72■■□□□ 1.07
SYT1-203ENST00000446242 ADRA2BP18089 450 aa21.64■■□□□ 1.05
SYT1-203ENST00000446242 MAPK8IP2Q13387 824 aaPredicted RBP19.99■□□□□ 0.79
SYT1-203ENST00000446242 DMRT2Q9Y5R5 561 aa19.78■□□□□ 0.76
SYT1-203ENST00000446242 SCAF1Q9H7N4 1312 aaKnown RBP19.64■□□□□ 0.73
SYT1-203ENST00000446242 CACNB1Q02641 598 aaPredicted RBP19.52■□□□□ 0.72
SYT1-203ENST00000446242 PPP4R3CPQ6ZMV5 832 aa19.17■□□□□ 0.66
SYT1-203ENST00000446242 DCAF8L1A6NGE4 600 aa19.07■□□□□ 0.64
SYT1-203ENST00000446242 HOXD11P31277 338 aaPredicted RBP18.93■□□□□ 0.62
SYT1-203ENST00000446242 CNKSR2Q8WXI2 1034 aa18.83■□□□□ 0.6
SYT1-203ENST00000446242 RNF216Q9NWF9 866 aaPredicted RBP18.72■□□□□ 0.59
SYT1-203ENST00000446242 RNF39Q9H2S5 420 aa18.7■□□□□ 0.58
SYT1-203ENST00000446242 C1QBPQ07021 282 aaKnown RBP18.36■□□□□ 0.53
SYT1-203ENST00000446242 NCBP3Q53F19 620 aaKnown RBP18.28■□□□□ 0.52
SYT1-203ENST00000446242 POTEHQ6S545 545 aa18.25■□□□□ 0.51
SYT1-203ENST00000446242 DNAJC5BQ9UF47 199 aa18.22■□□□□ 0.51
SYT1-203ENST00000446242 NPM3O75607 178 aaKnown RBP18.11■□□□□ 0.49
SYT1-203ENST00000446242 NISCHQ9Y2I1 1504 aa18.11■□□□□ 0.49
SYT1-203ENST00000446242 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.08■□□□□ 0.48
SYT1-203ENST00000446242 U3KPZ7 1027 aaPredicted RBP17.69■□□□□ 0.42
SYT1-203ENST00000446242 KCNA4P22459 653 aa17.56■□□□□ 0.4
SYT1-203ENST00000446242 SPINK5Q9NQ38 1064 aaPredicted RBP17.56■□□□□ 0.4
SYT1-203ENST00000446242 CAPN15O75808 1086 aa17.51■□□□□ 0.39
SYT1-203ENST00000446242 DSG3P32926 999 aa17.45■□□□□ 0.38
SYT1-203ENST00000446242 SLC4A2P04920 1241 aa17.38■□□□□ 0.37
SYT1-203ENST00000446242 TRHP20396 242 aaPredicted RBP17.19■□□□□ 0.34
SYT1-203ENST00000446242 ABCB7O75027 752 aa17.12■□□□□ 0.33
SYT1-203ENST00000446242 ZNF219Q9P2Y4 722 aaPredicted RBP17.03■□□□□ 0.32
SYT1-203ENST00000446242 APLP2Q06481 763 aa17.01■□□□□ 0.31
SYT1-203ENST00000446242 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.97■□□□□ 0.31
SYT1-203ENST00000446242 HNRNPUL2Q1KMD3 747 aaKnown RBP16.97■□□□□ 0.31
SYT1-203ENST00000446242 SAMD1Q6SPF0 538 aaPredicted RBP16.89■□□□□ 0.29
SYT1-203ENST00000446242 MYCNP04198 464 aaPredicted RBP16.69■□□□□ 0.26
SYT1-203ENST00000446242 POLA2Q14181 598 aa16.64■□□□□ 0.25
SYT1-203ENST00000446242 RBM42Q9BTD8 480 aaKnown RBP16.55■□□□□ 0.24
SYT1-203ENST00000446242 SLC4A1APQ9BWU0 796 aaKnown RBP16.47■□□□□ 0.23
SYT1-203ENST00000446242 ATF5Q9Y2D1 282 aaPredicted RBP16.46■□□□□ 0.23
SYT1-203ENST00000446242 SP7Q8TDD2 431 aaPredicted RBP16.45■□□□□ 0.22
SYT1-203ENST00000446242 FOXD4L1Q9NU39 408 aa16.39■□□□□ 0.21
SYT1-203ENST00000446242 CHRDL2Q6WN34 429 aa16.38■□□□□ 0.21
SYT1-203ENST00000446242 ZBTB22O15209 634 aa16.16■□□□□ 0.18
SYT1-203ENST00000446242 AKT1S1Q96B36 256 aa16.16■□□□□ 0.18
SYT1-203ENST00000446242 ZBTB12Q9Y330 459 aaPredicted RBP16.14■□□□□ 0.17
SYT1-203ENST00000446242 OSCARQ8IYS5 282 aa16.13■□□□□ 0.17
SYT1-203ENST00000446242 REM2Q8IYK8 340 aaPredicted RBP16.06■□□□□ 0.16
SYT1-203ENST00000446242 PIP4P2Q8N4L2 257 aa15.96■□□□□ 0.15
SYT1-203ENST00000446242 PITPNM1O00562 1244 aa15.91■□□□□ 0.14
SYT1-203ENST00000446242 ABCC9O60706 1549 aa15.88■□□□□ 0.13
SYT1-203ENST00000446242 CCDC180Q9P1Z9 1646 aa15.86■□□□□ 0.13
SYT1-203ENST00000446242 ATXN8OSP0DMR3 200 aa15.84■□□□□ 0.13
SYT1-203ENST00000446242 FXR2P51116 673 aaKnown RBP eCLIP15.79■□□□□ 0.12
SYT1-203ENST00000446242 HAX1O00165 279 aa15.75■□□□□ 0.11
SYT1-203ENST00000446242 FBLN2P98095 1184 aa15.7■□□□□ 0.1
SYT1-203ENST00000446242 SPDYE2BA6NHP3 402 aa15.67■□□□□ 0.1
SYT1-203ENST00000446242 SPDYE6P0CI01 402 aa15.67■□□□□ 0.1
SYT1-203ENST00000446242 SPDYE2Q495Y8 402 aa15.67■□□□□ 0.1
SYT1-203ENST00000446242 MKRN4PQ13434 485 aaPredicted RBP15.65■□□□□ 0.1
SYT1-203ENST00000446242 EVX2Q03828 476 aa15.61■□□□□ 0.09
SYT1-203ENST00000446242 PLSCR2Q9NRY7 297 aa15.6■□□□□ 0.09
SYT1-203ENST00000446242 CLEC11AQ9Y240 323 aa15.57■□□□□ 0.08
SYT1-203ENST00000446242 ZNF692Q9BU19 519 aaPredicted RBP15.51■□□□□ 0.07
SYT1-203ENST00000446242 PRKAR2AP13861 404 aaKnown RBP15.49■□□□□ 0.07
SYT1-203ENST00000446242 SPDYE1Q8NFV5 336 aaPredicted RBP15.48■□□□□ 0.07
SYT1-203ENST00000446242 SSUH2Q9Y2M2 353 aa15.46■□□□□ 0.07
SYT1-203ENST00000446242 LHX8Q68G74 356 aa15.4■□□□□ 0.06
SYT1-203ENST00000446242 CHADLQ6NUI6 762 aa15.33■□□□□ 0.04
SYT1-203ENST00000446242 C19orf67A6NJJ6 358 aa15.3■□□□□ 0.04
SYT1-203ENST00000446242 PABPN1Q86U42 306 aaKnown RBP eCLIP15.29■□□□□ 0.04
SYT1-203ENST00000446242 PRR29P0C7W0 189 aa15.22■□□□□ 0.03
SYT1-203ENST00000446242 ZCCHC6Q5VYS8 1495 aaKnown RBP15.2■□□□□ 0.02
SYT1-203ENST00000446242 GABBR2O75899 941 aa15.17■□□□□ 0.02
SYT1-203ENST00000446242 CSRNP3Q8WYN3 585 aa15.16■□□□□ 0.02
SYT1-203ENST00000446242 DNAJC5Q9H3Z4 198 aa15.03■□□□□ -0
SYT1-203ENST00000446242 DCAF1Q9Y4B6 1507 aa15.01□□□□□ -0.01
SYT1-203ENST00000446242 FARP1Q9Y4F1 1045 aaPredicted RBP14.99□□□□□ -0.01
SYT1-203ENST00000446242 CD44P16070 742 aaKnown RBP14.98□□□□□ -0.01
SYT1-203ENST00000446242 DCAF8L2P0C7V8 631 aa14.91□□□□□ -0.02
SYT1-203ENST00000446242 POTEIP0CG38 1075 aa14.89□□□□□ -0.03
SYT1-203ENST00000446242 RB1CC1Q8TDY2 1594 aa14.87□□□□□ -0.03
SYT1-203ENST00000446242 MYO15BQ96JP2 1530 aa14.87□□□□□ -0.03
SYT1-203ENST00000446242 EHMT2Q96KQ7 1210 aa14.86□□□□□ -0.03
SYT1-203ENST00000446242 CREBZFQ9NS37 354 aa14.8□□□□□ -0.04
SYT1-203ENST00000446242 NACADO15069 1562 aa14.79□□□□□ -0.04
SYT1-203ENST00000446242 SPDYE4A6NLX3 237 aa14.74□□□□□ -0.05
SYT1-203ENST00000446242 ZRANB1Q9UGI0 708 aa14.74□□□□□ -0.05
SYT1-203ENST00000446242 STAG3Q9UJ98 1225 aa14.71□□□□□ -0.05
SYT1-203ENST00000446242 ZNF579Q8NAF0 562 aaKnown RBP14.69□□□□□ -0.06
SYT1-203ENST00000446242 DCBLD2Q96PD2 775 aa14.68□□□□□ -0.06
SYT1-203ENST00000446242 CLCN6P51797 869 aa14.67□□□□□ -0.06
SYT1-203ENST00000446242 SHROOM4Q9ULL8 1493 aa14.63□□□□□ -0.07
SYT1-203ENST00000446242 GALR2O43603 387 aaPredicted RBP14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms