RNA–Protein interactions for RNA: ENST00000428797.7

GABRA1-203, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,285 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-203ENST00000428797 KNSTRNQ9Y448 316 aa12.48□□□□□ -0.41
GABRA1-203ENST00000428797 NEFMP07197 916 aa12.48□□□□□ -0.41
GABRA1-203ENST00000428797 WDR97A6NE52 1622 aa12.47□□□□□ -0.41
GABRA1-203ENST00000428797 CNTLNQ9NXG0 1405 aa12.46□□□□□ -0.41
GABRA1-203ENST00000428797 ARID4BQ4LE39 1312 aaPredicted RBP12.46□□□□□ -0.42
GABRA1-203ENST00000428797 EHBP1L1Q8N3D4 1523 aa12.46□□□□□ -0.42
GABRA1-203ENST00000428797 TMF1P82094 1093 aa12.45□□□□□ -0.42
GABRA1-203ENST00000428797 NUP155O75694 1391 aa12.45□□□□□ -0.42
GABRA1-203ENST00000428797 KTN1Q86UP2 1357 aaKnown RBP12.45□□□□□ -0.42
GABRA1-203ENST00000428797 PDE3BQ13370 1112 aa12.45□□□□□ -0.42
GABRA1-203ENST00000428797 CCDC7Q96M83 1385 aa12.45□□□□□ -0.42
GABRA1-203ENST00000428797 RSPH4AQ5TD94 716 aa12.45□□□□□ -0.42
GABRA1-203ENST00000428797 DNMBPQ6XZF7 1577 aa12.44□□□□□ -0.42
GABRA1-203ENST00000428797 ABCA10Q8WWZ4 1543 aa12.43□□□□□ -0.42
GABRA1-203ENST00000428797 MIA2Q96PC5 1412 aa12.43□□□□□ -0.42
GABRA1-203ENST00000428797 TOPBP1Q92547 1522 aa12.43□□□□□ -0.42
GABRA1-203ENST00000428797 TCERG1O14776 1098 aaKnown RBP12.43□□□□□ -0.42
GABRA1-203ENST00000428797 KIF15Q9NS87 1388 aa12.42□□□□□ -0.42
GABRA1-203ENST00000428797 POLA1P09884 1462 aaPredicted RBP12.42□□□□□ -0.42
GABRA1-203ENST00000428797 WASHC2AQ641Q2 1341 aa12.41□□□□□ -0.42
GABRA1-203ENST00000428797 PCF11O94913 1555 aaKnown RBP12.41□□□□□ -0.42
GABRA1-203ENST00000428797 ERCC6Q03468 1493 aa12.41□□□□□ -0.42
GABRA1-203ENST00000428797 RCAN3Q9UKA8 241 aa12.41□□□□□ -0.42
GABRA1-203ENST00000428797 NLRP13Q86W25 1043 aa12.4□□□□□ -0.42
GABRA1-203ENST00000428797 BCL11AQ9H165 835 aa12.4□□□□□ -0.42
GABRA1-203ENST00000428797 CUL7Q14999 1698 aa12.4□□□□□ -0.42
GABRA1-203ENST00000428797 USP47Q96K76 1375 aa12.39□□□□□ -0.43
GABRA1-203ENST00000428797 SUPT6HQ7KZ85 1726 aaKnown RBP12.39□□□□□ -0.43
GABRA1-203ENST00000428797 NAIPQ13075 1403 aa12.38□□□□□ -0.43
GABRA1-203ENST00000428797 MYBBP1AQ9BQG0 1328 aaKnown RBP12.38□□□□□ -0.43
GABRA1-203ENST00000428797 CHGAP10645 457 aaKnown RBP12.38□□□□□ -0.43
GABRA1-203ENST00000428797 BECN1Q14457 450 aa12.38□□□□□ -0.43
GABRA1-203ENST00000428797 CC2D2AQ9P2K1 1620 aa12.37□□□□□ -0.43
GABRA1-203ENST00000428797 CC2D1BQ5T0F9 858 aaKnown RBP12.37□□□□□ -0.43
GABRA1-203ENST00000428797 KIF7Q2M1P5 1343 aa12.37□□□□□ -0.43
GABRA1-203ENST00000428797 IPO9Q96P70 1041 aaKnown RBP12.37□□□□□ -0.43
GABRA1-203ENST00000428797 DEKP35659 375 aaKnown RBP12.36□□□□□ -0.43
GABRA1-203ENST00000428797 MAPKBP1O60336 1514 aa12.36□□□□□ -0.43
GABRA1-203ENST00000428797 NPM1P06748 294 aaKnown RBP eCLIP12.35□□□□□ -0.43
GABRA1-203ENST00000428797 SENP3-EIF4A1A0A087X0R7 540 aa12.34□□□□□ -0.43
GABRA1-203ENST00000428797 HECW1Q76N89 1606 aa12.34□□□□□ -0.43
GABRA1-203ENST00000428797 CFAP53Q96M91 514 aa12.34□□□□□ -0.43
GABRA1-203ENST00000428797 JPH4Q96JJ6 628 aa12.33□□□□□ -0.44
GABRA1-203ENST00000428797 ROCK1Q13464 1354 aa12.32□□□□□ -0.44
GABRA1-203ENST00000428797 GRIN2BQ13224 1484 aa12.32□□□□□ -0.44
GABRA1-203ENST00000428797 ST20-MTHFSA0A0A6YYL1 179 aa12.32□□□□□ -0.44
GABRA1-203ENST00000428797 KANK1Q14678 1352 aa12.31□□□□□ -0.44
GABRA1-203ENST00000428797 CCDC144AA2RUR9 1427 aa12.29□□□□□ -0.44
GABRA1-203ENST00000428797 AKNAQ7Z591 1439 aa12.29□□□□□ -0.44
GABRA1-203ENST00000428797 MS4A1P11836 297 aa12.28□□□□□ -0.44
GABRA1-203ENST00000428797 HNRNPMP52272 730 aaKnown RBP eCLIP12.28□□□□□ -0.44
GABRA1-203ENST00000428797 RRP1P56182 461 aaKnown RBP12.28□□□□□ -0.44
GABRA1-203ENST00000428797 LAS1LQ9Y4W2 734 aaKnown RBP12.28□□□□□ -0.44
GABRA1-203ENST00000428797 PTPN23Q9H3S7 1636 aa12.28□□□□□ -0.44
GABRA1-203ENST00000428797 THOC2Q8NI27 1593 aaKnown RBP12.28□□□□□ -0.44
GABRA1-203ENST00000428797 BRD4O60885 1362 aaPredicted RBP12.28□□□□□ -0.44
GABRA1-203ENST00000428797 EFCAB2Q5VUJ9 269 aa12.28□□□□□ -0.44
GABRA1-203ENST00000428797 ANKRD50Q9ULJ7 1429 aa12.28□□□□□ -0.44
GABRA1-203ENST00000428797 NESP48681 1621 aa12.27□□□□□ -0.45
GABRA1-203ENST00000428797 ZNF644Q9H582 1327 aaPredicted RBP12.27□□□□□ -0.45
GABRA1-203ENST00000428797 HSP90AA1P07900 732 aaKnown RBP12.26□□□□□ -0.45
GABRA1-203ENST00000428797 USP35Q9P2H5 1018 aa12.26□□□□□ -0.45
GABRA1-203ENST00000428797 EPRSP07814 1512 aaKnown RBP12.26□□□□□ -0.45
GABRA1-203ENST00000428797 LAMC3Q9Y6N6 1575 aa12.26□□□□□ -0.45
GABRA1-203ENST00000428797 KIAA1107Q9UPP5 1409 aa12.26□□□□□ -0.45
GABRA1-203ENST00000428797 DAPK1P53355 1430 aa12.26□□□□□ -0.45
GABRA1-203ENST00000428797 CFAP43Q8NDM7 1665 aa12.25□□□□□ -0.45
GABRA1-203ENST00000428797 EIF3AQ14152 1382 aaKnown RBP12.25□□□□□ -0.45
GABRA1-203ENST00000428797 ANP32BQ92688 251 aaKnown RBP12.25□□□□□ -0.45
GABRA1-203ENST00000428797 NBPF8Q3BBV2 869 aa12.25□□□□□ -0.45
GABRA1-203ENST00000428797 RGS3P49796 1198 aa12.24□□□□□ -0.45
GABRA1-203ENST00000428797 GOLGA2Q08379 1002 aa12.24□□□□□ -0.45
GABRA1-203ENST00000428797 SMG6Q86US8 1419 aaKnown RBP12.24□□□□□ -0.45
GABRA1-203ENST00000428797 EIF5BO60841 1220 aaKnown RBP12.24□□□□□ -0.45
GABRA1-203ENST00000428797 TROQ12816 1431 aaPredicted RBP12.24□□□□□ -0.45
GABRA1-203ENST00000428797 PRDM2Q13029 1718 aa12.23□□□□□ -0.45
GABRA1-203ENST00000428797 STAC3Q96MF2 364 aa12.23□□□□□ -0.45
GABRA1-203ENST00000428797 WASHC2CQ9Y4E1 1318 aa12.23□□□□□ -0.45
GABRA1-203ENST00000428797 ANKRD30BQ9BXX2 1392 aa12.23□□□□□ -0.45
GABRA1-203ENST00000428797 STAG3Q9UJ98 1225 aa12.22□□□□□ -0.45
GABRA1-203ENST00000428797 IQGAP2Q13576 1575 aa12.21□□□□□ -0.45
GABRA1-203ENST00000428797 PDE4AP27815 886 aa12.21□□□□□ -0.45
GABRA1-203ENST00000428797 NGEFQ8N5V2 710 aa12.21□□□□□ -0.45
GABRA1-203ENST00000428797 NCOA1Q15788 1441 aa12.21□□□□□ -0.45
GABRA1-203ENST00000428797 PANK3Q9H999 370 aa12.21□□□□□ -0.46
GABRA1-203ENST00000428797 IFT140Q96RY7 1462 aa12.21□□□□□ -0.46
GABRA1-203ENST00000428797 FTSJ3Q8IY81 847 aaKnown RBP12.2□□□□□ -0.46
GABRA1-203ENST00000428797 PTPRGP23470 1445 aa12.2□□□□□ -0.46
GABRA1-203ENST00000428797 CHMP4BQ9H444 224 aaKnown RBP12.2□□□□□ -0.46
GABRA1-203ENST00000428797 CENPQQ7L2Z9 268 aaPredicted RBP12.2□□□□□ -0.46
GABRA1-203ENST00000428797 EXOC6Q8TAG9 804 aa12.2□□□□□ -0.46
GABRA1-203ENST00000428797 MRC2Q9UBG0 1479 aa12.19□□□□□ -0.46
GABRA1-203ENST00000428797 KIAA0586Q9BVV6 1533 aa12.19□□□□□ -0.46
GABRA1-203ENST00000428797 PNNQ9H307 717 aaKnown RBP12.19□□□□□ -0.46
GABRA1-203ENST00000428797 MYH16Q9H6N6 1097 aa12.19□□□□□ -0.46
GABRA1-203ENST00000428797 RPRD2Q5VT52 1461 aaKnown RBP12.19□□□□□ -0.46
GABRA1-203ENST00000428797 PNISRQ8TF01 805 aaKnown RBP12.19□□□□□ -0.46
GABRA1-203ENST00000428797 MORC1Q86VD1 984 aa12.18□□□□□ -0.46
GABRA1-203ENST00000428797 FRAT1Q92837 279 aaPredicted RBP12.18□□□□□ -0.46
GABRA1-203ENST00000428797 MAPK8IP3Q9UPT6 1336 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms