RNA–Protein interactions for RNA: ENST00000428331.6

ATP2C1-204, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2C1, Length 4,795 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-204ENST00000428331 CC2D2AQ9P2K1 1620 aa14.35□□□□□ -0.11
ATP2C1-204ENST00000428331 SMG6Q86US8 1419 aaKnown RBP14.34□□□□□ -0.11
ATP2C1-204ENST00000428331 SALL2Q9Y467 1007 aaPredicted RBP14.34□□□□□ -0.11
ATP2C1-204ENST00000428331 SNAPC4Q5SXM2 1469 aa14.33□□□□□ -0.11
ATP2C1-204ENST00000428331 PAK3O75914 559 aaPredicted RBP14.33□□□□□ -0.12
ATP2C1-204ENST00000428331 CARD11Q9BXL7 1154 aa14.33□□□□□ -0.12
ATP2C1-204ENST00000428331 MIA2Q96PC5 1412 aa14.33□□□□□ -0.12
ATP2C1-204ENST00000428331 AKNAQ7Z591 1439 aa14.32□□□□□ -0.12
ATP2C1-204ENST00000428331 TCERG1O14776 1098 aaKnown RBP14.32□□□□□ -0.12
ATP2C1-204ENST00000428331 GAPVD1Q14C86 1478 aa14.32□□□□□ -0.12
ATP2C1-204ENST00000428331 ROCK2O75116 1388 aaKnown RBP14.32□□□□□ -0.12
ATP2C1-204ENST00000428331 PRDM2Q13029 1718 aa14.31□□□□□ -0.12
ATP2C1-204ENST00000428331 CFDP1Q9UEE9 299 aaPredicted RBP14.31□□□□□ -0.12
ATP2C1-204ENST00000428331 PPM1GO15355 546 aaPredicted RBP14.3□□□□□ -0.12
ATP2C1-204ENST00000428331 ARID4BQ4LE39 1312 aaPredicted RBP14.3□□□□□ -0.12
ATP2C1-204ENST00000428331 KDM2AQ9Y2K7 1162 aa14.3□□□□□ -0.12
ATP2C1-204ENST00000428331 USP47Q96K76 1375 aa14.29□□□□□ -0.12
ATP2C1-204ENST00000428331 GRIN2BQ13224 1484 aa14.29□□□□□ -0.12
ATP2C1-204ENST00000428331 ANKRD30BQ9BXX2 1392 aa14.29□□□□□ -0.12
ATP2C1-204ENST00000428331 THOC2Q8NI27 1593 aaKnown RBP14.28□□□□□ -0.12
ATP2C1-204ENST00000428331 PKD2Q13563 968 aa14.28□□□□□ -0.12
ATP2C1-204ENST00000428331 NEFMP07197 916 aa14.28□□□□□ -0.12
ATP2C1-204ENST00000428331 RALBP1Q15311 655 aa14.28□□□□□ -0.12
ATP2C1-204ENST00000428331 RCAN3Q9UKA8 241 aa14.27□□□□□ -0.12
ATP2C1-204ENST00000428331 UGGT2Q9NYU1 1516 aa14.27□□□□□ -0.12
ATP2C1-204ENST00000428331 CTTNBP2Q8WZ74 1663 aa14.27□□□□□ -0.13
ATP2C1-204ENST00000428331 DDRGK1Q96HY6 314 aa14.27□□□□□ -0.13
ATP2C1-204ENST00000428331 RPRD2Q5VT52 1461 aaKnown RBP14.27□□□□□ -0.13
ATP2C1-204ENST00000428331 LAS1LQ9Y4W2 734 aaKnown RBP14.26□□□□□ -0.13
ATP2C1-204ENST00000428331 KIF15Q9NS87 1388 aa14.25□□□□□ -0.13
ATP2C1-204ENST00000428331 ROCK1Q13464 1354 aa14.25□□□□□ -0.13
ATP2C1-204ENST00000428331 PRKCSHP14314 528 aaPredicted RBP14.25□□□□□ -0.13
ATP2C1-204ENST00000428331 PNISRQ8TF01 805 aaKnown RBP14.25□□□□□ -0.13
ATP2C1-204ENST00000428331 TCOF1Q13428 1488 aaKnown RBP14.24□□□□□ -0.13
ATP2C1-204ENST00000428331 RRP1P56182 461 aaKnown RBP14.24□□□□□ -0.13
ATP2C1-204ENST00000428331 PDE3BQ13370 1112 aa14.24□□□□□ -0.13
ATP2C1-204ENST00000428331 TSPY4P0CV99 314 aa14.23□□□□□ -0.13
ATP2C1-204ENST00000428331 TSPY10P0CW01 314 aa14.23□□□□□ -0.13
ATP2C1-204ENST00000428331 USP35Q9P2H5 1018 aa14.23□□□□□ -0.13
ATP2C1-204ENST00000428331 PDS5BQ9NTI5 1447 aa14.23□□□□□ -0.13
ATP2C1-204ENST00000428331 MYBBP1AQ9BQG0 1328 aaKnown RBP14.23□□□□□ -0.13
ATP2C1-204ENST00000428331 HECW1Q76N89 1606 aa14.22□□□□□ -0.13
ATP2C1-204ENST00000428331 PDE4AP27815 886 aa14.22□□□□□ -0.13
ATP2C1-204ENST00000428331 EPRSP07814 1512 aaKnown RBP14.22□□□□□ -0.13
ATP2C1-204ENST00000428331 EXOC6Q8TAG9 804 aa14.22□□□□□ -0.13
ATP2C1-204ENST00000428331 ZNF644Q9H582 1327 aaPredicted RBP14.21□□□□□ -0.13
ATP2C1-204ENST00000428331 MS4A1P11836 297 aa14.21□□□□□ -0.13
ATP2C1-204ENST00000428331 DAPK1P53355 1430 aa14.21□□□□□ -0.14
ATP2C1-204ENST00000428331 NLRP13Q86W25 1043 aa14.21□□□□□ -0.14
ATP2C1-204ENST00000428331 KDM5BQ9UGL1 1544 aa14.2□□□□□ -0.14
ATP2C1-204ENST00000428331 ANKRD30AQ9BXX3 1397 aa14.19□□□□□ -0.14
ATP2C1-204ENST00000428331 NESP48681 1621 aa14.19□□□□□ -0.14
ATP2C1-204ENST00000428331 BRD4O60885 1362 aaPredicted RBP14.19□□□□□ -0.14
ATP2C1-204ENST00000428331 DCAF11Q8TEB1 546 aa14.19□□□□□ -0.14
ATP2C1-204ENST00000428331 RNF123Q5XPI4 1314 aa14.18□□□□□ -0.14
ATP2C1-204ENST00000428331 KTN1Q86UP2 1357 aaKnown RBP14.18□□□□□ -0.14
ATP2C1-204ENST00000428331 ST20-MTHFSA0A0A6YYL1 179 aa14.18□□□□□ -0.14
ATP2C1-204ENST00000428331 SAMD9Q5K651 1589 aa14.17□□□□□ -0.14
ATP2C1-204ENST00000428331 NUP155O75694 1391 aa14.17□□□□□ -0.14
ATP2C1-204ENST00000428331 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.16□□□□□ -0.14
ATP2C1-204ENST00000428331 GCC2Q8IWJ2 1684 aa14.16□□□□□ -0.14
ATP2C1-204ENST00000428331 CDK13Q14004 1512 aaKnown RBP14.15□□□□□ -0.14
ATP2C1-204ENST00000428331 ABCC5O15440 1437 aa14.15□□□□□ -0.14
ATP2C1-204ENST00000428331 SPATA31E1Q6ZUB1 1445 aa14.15□□□□□ -0.14
ATP2C1-204ENST00000428331 KIAA1107Q9UPP5 1409 aa14.15□□□□□ -0.14
ATP2C1-204ENST00000428331 RTN4Q9NQC3 1192 aaKnown RBP14.14□□□□□ -0.15
ATP2C1-204ENST00000428331 PLEKHD1A6NEE1 506 aa14.14□□□□□ -0.15
ATP2C1-204ENST00000428331 DHX29Q7Z478 1369 aaKnown RBP14.14□□□□□ -0.15
ATP2C1-204ENST00000428331 TEX14Q8IWB6 1497 aa14.13□□□□□ -0.15
ATP2C1-204ENST00000428331 BACH2Q9BYV9 841 aa14.13□□□□□ -0.15
ATP2C1-204ENST00000428331 ARHGEF11O15085 1522 aa14.12□□□□□ -0.15
ATP2C1-204ENST00000428331 WDR43Q15061 677 aaKnown RBP eCLIP14.12□□□□□ -0.15
ATP2C1-204ENST00000428331 FBLN2P98095 1184 aa14.11□□□□□ -0.15
ATP2C1-204ENST00000428331 RGL3Q3MIN7 710 aa14.11□□□□□ -0.15
ATP2C1-204ENST00000428331 CC2D1BQ5T0F9 858 aaKnown RBP14.11□□□□□ -0.15
ATP2C1-204ENST00000428331 URB2Q14146 1524 aaKnown RBP14.11□□□□□ -0.15
ATP2C1-204ENST00000428331 DENND4BO75064 1496 aaPredicted RBP14.11□□□□□ -0.15
ATP2C1-204ENST00000428331 MAGI3Q5TCQ9 1506 aa14.1□□□□□ -0.15
ATP2C1-204ENST00000428331 IQGAP2Q13576 1575 aa14.09□□□□□ -0.15
ATP2C1-204ENST00000428331 ANKRD50Q9ULJ7 1429 aa14.08□□□□□ -0.15
ATP2C1-204ENST00000428331 KDM6BO15054 1643 aa14.08□□□□□ -0.16
ATP2C1-204ENST00000428331 PLIN1O60240 522 aa14.07□□□□□ -0.16
ATP2C1-204ENST00000428331 CHMP7Q8WUX9 453 aaPredicted RBP14.07□□□□□ -0.16
ATP2C1-204ENST00000428331 KIF21AQ7Z4S6 1674 aa14.07□□□□□ -0.16
ATP2C1-204ENST00000428331 CRBNQ96SW2 442 aa14.06□□□□□ -0.16
ATP2C1-204ENST00000428331 TMF1P82094 1093 aa14.06□□□□□ -0.16
ATP2C1-204ENST00000428331 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.05□□□□□ -0.16
ATP2C1-204ENST00000428331 LAMC3Q9Y6N6 1575 aa14.05□□□□□ -0.16
ATP2C1-204ENST00000428331 CDCA7LQ96GN5 454 aa14.04□□□□□ -0.16
ATP2C1-204ENST00000428331 KNSTRNQ9Y448 316 aa14.04□□□□□ -0.16
ATP2C1-204ENST00000428331 IL27Q8NEV9 243 aa14.04□□□□□ -0.16
ATP2C1-204ENST00000428331 TROQ12816 1431 aaPredicted RBP14.04□□□□□ -0.16
ATP2C1-204ENST00000428331 GSE1Q14687 1217 aa14.03□□□□□ -0.16
ATP2C1-204ENST00000428331 LRPPRCP42704 1394 aaKnown RBP14.03□□□□□ -0.16
ATP2C1-204ENST00000428331 ABCA5Q8WWZ7 1642 aa14.02□□□□□ -0.16
ATP2C1-204ENST00000428331 WASHC2CQ9Y4E1 1318 aa14.02□□□□□ -0.16
ATP2C1-204ENST00000428331 CENPQQ7L2Z9 268 aaPredicted RBP14.02□□□□□ -0.16
ATP2C1-204ENST00000428331 EIF5BO60841 1220 aaKnown RBP14.02□□□□□ -0.16
ATP2C1-204ENST00000428331 CANXP27824 592 aaKnown RBP14.02□□□□□ -0.16
ATP2C1-204ENST00000428331 RGS3P49796 1198 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms