RNA–Protein interactions for RNA: ENST00000418185.6

GTF2IRD2B-202, Transcript of GTF2I repeat domain containing 2B, humanhuman

TSL 1 (best)

Gene GTF2IRD2B, Length 3,485 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD2B-202ENST00000418185 NCOA2Q15596 1464 aa19.11■□□□□ 0.65
GTF2IRD2B-202ENST00000418185 DEKP35659 375 aaKnown RBP19.1■□□□□ 0.65
GTF2IRD2B-202ENST00000418185 PAK3O75914 559 aaPredicted RBP19.09■□□□□ 0.65
GTF2IRD2B-202ENST00000418185 PCF11O94913 1555 aaKnown RBP19.09■□□□□ 0.65
GTF2IRD2B-202ENST00000418185 NOP58Q9Y2X3 529 aaKnown RBP19.08■□□□□ 0.65
GTF2IRD2B-202ENST00000418185 AKNAQ7Z591 1439 aa19.08■□□□□ 0.64
GTF2IRD2B-202ENST00000418185 NUP155O75694 1391 aa19.08■□□□□ 0.64
GTF2IRD2B-202ENST00000418185 RGS3P49796 1198 aa19.07■□□□□ 0.64
GTF2IRD2B-202ENST00000418185 UACAQ9BZF9 1416 aa19.07■□□□□ 0.64
GTF2IRD2B-202ENST00000418185 SLC4A3P48751 1232 aa19.06■□□□□ 0.64
GTF2IRD2B-202ENST00000418185 POLA1P09884 1462 aaPredicted RBP19.05■□□□□ 0.64
GTF2IRD2B-202ENST00000418185 EXOC6Q8TAG9 804 aa19.05■□□□□ 0.64
GTF2IRD2B-202ENST00000418185 CANXP27824 592 aaKnown RBP19.05■□□□□ 0.64
GTF2IRD2B-202ENST00000418185 NAIPQ13075 1403 aa19.04■□□□□ 0.64
GTF2IRD2B-202ENST00000418185 MYOM3Q5VTT5 1437 aa19.04■□□□□ 0.64
GTF2IRD2B-202ENST00000418185 CCDC7Q96M83 1385 aa19.04■□□□□ 0.64
GTF2IRD2B-202ENST00000418185 CDCA7LQ96GN5 454 aa19.03■□□□□ 0.64
GTF2IRD2B-202ENST00000418185 CASKIN1Q8WXD9 1431 aa19.02■□□□□ 0.64
GTF2IRD2B-202ENST00000418185 GAPVD1Q14C86 1478 aa19■□□□□ 0.63
GTF2IRD2B-202ENST00000418185 NUDCQ9Y266 331 aa18.98■□□□□ 0.63
GTF2IRD2B-202ENST00000418185 CDK13Q14004 1512 aaKnown RBP18.97■□□□□ 0.63
GTF2IRD2B-202ENST00000418185 CCDC146Q8IYE0 955 aa18.97■□□□□ 0.63
GTF2IRD2B-202ENST00000418185 USP47Q96K76 1375 aa18.97■□□□□ 0.63
GTF2IRD2B-202ENST00000418185 WDR43Q15061 677 aaKnown RBP eCLIP18.97■□□□□ 0.63
GTF2IRD2B-202ENST00000418185 CC2D2AQ9P2K1 1620 aa18.96■□□□□ 0.63
GTF2IRD2B-202ENST00000418185 NBPF1Q3BBV0 1214 aa18.96■□□□□ 0.63
GTF2IRD2B-202ENST00000418185 MAP3K1Q13233 1512 aa18.96■□□□□ 0.63
GTF2IRD2B-202ENST00000418185 NEFMP07197 916 aa18.95■□□□□ 0.62
GTF2IRD2B-202ENST00000418185 RCAN3Q9UKA8 241 aa18.94■□□□□ 0.62
GTF2IRD2B-202ENST00000418185 TOPBP1Q92547 1522 aa18.94■□□□□ 0.62
GTF2IRD2B-202ENST00000418185 HFM1A2PYH4 1435 aa18.94■□□□□ 0.62
GTF2IRD2B-202ENST00000418185 ZBED9Q6R2W3 1325 aa18.93■□□□□ 0.62
GTF2IRD2B-202ENST00000418185 ROCK2O75116 1388 aaKnown RBP18.91■□□□□ 0.62
GTF2IRD2B-202ENST00000418185 JPH4Q96JJ6 628 aa18.91■□□□□ 0.62
GTF2IRD2B-202ENST00000418185 SAFB2Q14151 953 aaKnown RBP eCLIP18.9■□□□□ 0.62
GTF2IRD2B-202ENST00000418185 CNTLNQ9NXG0 1405 aa18.9■□□□□ 0.62
GTF2IRD2B-202ENST00000418185 NUTM2DQ5VT03 806 aaPredicted RBP18.89■□□□□ 0.61
GTF2IRD2B-202ENST00000418185 FYCO1Q9BQS8 1478 aa18.89■□□□□ 0.61
GTF2IRD2B-202ENST00000418185 FRAT1Q92837 279 aaPredicted RBP18.89■□□□□ 0.61
GTF2IRD2B-202ENST00000418185 PRG4Q92954 1404 aaPredicted RBP18.88■□□□□ 0.61
GTF2IRD2B-202ENST00000418185 PANK3Q9H999 370 aa18.88■□□□□ 0.61
GTF2IRD2B-202ENST00000418185 EIF5BO60841 1220 aaKnown RBP18.87■□□□□ 0.61
GTF2IRD2B-202ENST00000418185 KNSTRNQ9Y448 316 aa18.86■□□□□ 0.61
GTF2IRD2B-202ENST00000418185 SPRYD3Q8NCJ5 442 aa18.84■□□□□ 0.61
GTF2IRD2B-202ENST00000418185 DNMBPQ6XZF7 1577 aa18.84■□□□□ 0.61
GTF2IRD2B-202ENST00000418185 ABCA10Q8WWZ4 1543 aa18.83■□□□□ 0.61
GTF2IRD2B-202ENST00000418185 CRBNQ96SW2 442 aa18.82■□□□□ 0.6
GTF2IRD2B-202ENST00000418185 PLPPR3Q6T4P5 718 aa18.81■□□□□ 0.6
GTF2IRD2B-202ENST00000418185 RRP7AQ9Y3A4 280 aaKnown RBP18.81■□□□□ 0.6
GTF2IRD2B-202ENST00000418185 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.8■□□□□ 0.6
GTF2IRD2B-202ENST00000418185 FANCIQ9NVI1 1328 aa18.8■□□□□ 0.6
GTF2IRD2B-202ENST00000418185 ERCC6Q03468 1493 aa18.79■□□□□ 0.6
GTF2IRD2B-202ENST00000418185 PNISRQ8TF01 805 aaKnown RBP18.79■□□□□ 0.6
GTF2IRD2B-202ENST00000418185 IPO9Q96P70 1041 aaKnown RBP18.79■□□□□ 0.6
GTF2IRD2B-202ENST00000418185 BCL2L13Q9BXK5 485 aa18.79■□□□□ 0.6
GTF2IRD2B-202ENST00000418185 CFAP43Q8NDM7 1665 aa18.79■□□□□ 0.6
GTF2IRD2B-202ENST00000418185 RRP1P56182 461 aaKnown RBP18.78■□□□□ 0.6
GTF2IRD2B-202ENST00000418185 ANKRD30AQ9BXX3 1397 aa18.77■□□□□ 0.59
GTF2IRD2B-202ENST00000418185 CLUAP1Q96AJ1 413 aa18.76■□□□□ 0.59
GTF2IRD2B-202ENST00000418185 PDE4AP27815 886 aa18.76■□□□□ 0.59
GTF2IRD2B-202ENST00000418185 KTN1Q86UP2 1357 aaKnown RBP18.74■□□□□ 0.59
GTF2IRD2B-202ENST00000418185 PPM1GO15355 546 aaPredicted RBP18.74■□□□□ 0.59
GTF2IRD2B-202ENST00000418185 C20orf194Q5TEA3 1177 aa18.74■□□□□ 0.59
GTF2IRD2B-202ENST00000418185 NLRP13Q86W25 1043 aa18.73■□□□□ 0.59
GTF2IRD2B-202ENST00000418185 URB2Q14146 1524 aaKnown RBP18.73■□□□□ 0.59
GTF2IRD2B-202ENST00000418185 ANKRD30BQ9BXX2 1392 aa18.73■□□□□ 0.59
GTF2IRD2B-202ENST00000418185 TMF1P82094 1093 aa18.72■□□□□ 0.59
GTF2IRD2B-202ENST00000418185 PTPN23Q9H3S7 1636 aa18.72■□□□□ 0.59
GTF2IRD2B-202ENST00000418185 ADAMTS8Q9UP79 889 aa18.72■□□□□ 0.59
GTF2IRD2B-202ENST00000418185 CUL7Q14999 1698 aa18.71■□□□□ 0.59
GTF2IRD2B-202ENST00000418185 MYBBP1AQ9BQG0 1328 aaKnown RBP18.71■□□□□ 0.59
GTF2IRD2B-202ENST00000418185 EFCAB5A4FU69 1503 aa18.71■□□□□ 0.59
GTF2IRD2B-202ENST00000418185 EPRSP07814 1512 aaKnown RBP18.69■□□□□ 0.58
GTF2IRD2B-202ENST00000418185 SLKQ9H2G2 1235 aaPredicted RBP18.69■□□□□ 0.58
GTF2IRD2B-202ENST00000418185 IL27Q8NEV9 243 aa18.68■□□□□ 0.58
GTF2IRD2B-202ENST00000418185 ANKRD50Q9ULJ7 1429 aa18.68■□□□□ 0.58
GTF2IRD2B-202ENST00000418185 APAF1O14727 1248 aa18.67■□□□□ 0.58
GTF2IRD2B-202ENST00000418185 PLEKHG5O94827 1062 aa18.67■□□□□ 0.58
GTF2IRD2B-202ENST00000418185 ABCC5O15440 1437 aa18.67■□□□□ 0.58
GTF2IRD2B-202ENST00000418185 DAPK1P53355 1430 aa18.67■□□□□ 0.58
GTF2IRD2B-202ENST00000418185 CTTNBP2Q8WZ74 1663 aa18.66■□□□□ 0.58
GTF2IRD2B-202ENST00000418185 PLB1Q6P1J6 1458 aa18.66■□□□□ 0.58
GTF2IRD2B-202ENST00000418185 RALBP1Q15311 655 aa18.66■□□□□ 0.58
GTF2IRD2B-202ENST00000418185 ZNF608Q9ULD9 1512 aaPredicted RBP18.66■□□□□ 0.58
GTF2IRD2B-202ENST00000418185 GGT6Q6P531 493 aa18.65■□□□□ 0.58
GTF2IRD2B-202ENST00000418185 SLC24A1O60721 1099 aa18.65■□□□□ 0.58
GTF2IRD2B-202ENST00000418185 STK26Q9P289 416 aa18.65■□□□□ 0.58
GTF2IRD2B-202ENST00000418185 KIF15Q9NS87 1388 aa18.64■□□□□ 0.58
GTF2IRD2B-202ENST00000418185 ERICH6BQ5W0A0 696 aa18.64■□□□□ 0.57
GTF2IRD2B-202ENST00000418185 THOC2Q8NI27 1593 aaKnown RBP18.64■□□□□ 0.57
GTF2IRD2B-202ENST00000418185 LAMC3Q9Y6N6 1575 aa18.64■□□□□ 0.57
GTF2IRD2B-202ENST00000418185 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.63■□□□□ 0.57
GTF2IRD2B-202ENST00000418185 NCOA1Q15788 1441 aa18.63■□□□□ 0.57
GTF2IRD2B-202ENST00000418185 KIF3BO15066 747 aa18.62■□□□□ 0.57
GTF2IRD2B-202ENST00000418185 AFAP1Q8N556 730 aa18.62■□□□□ 0.57
GTF2IRD2B-202ENST00000418185 SNAPC4Q5SXM2 1469 aa18.62■□□□□ 0.57
GTF2IRD2B-202ENST00000418185 TRAK1Q9UPV9 953 aa18.62■□□□□ 0.57
GTF2IRD2B-202ENST00000418185 U2SURPO15042 1029 aaKnown RBP18.62■□□□□ 0.57
GTF2IRD2B-202ENST00000418185 ABCA5Q8WWZ7 1642 aa18.61■□□□□ 0.57
GTF2IRD2B-202ENST00000418185 KDM6BO15054 1643 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms