RNA–Protein interactions for RNA: ENST00000418185.6

GTF2IRD2B-202, Transcript of GTF2I repeat domain containing 2B, humanhuman

TSL 1 (best)

Gene GTF2IRD2B, Length 3,485 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD2B-202ENST00000418185 NISCHQ9Y2I1 1504 aa26.83■■□□□ 1.89
GTF2IRD2B-202ENST00000418185 SHROOM4Q9ULL8 1493 aa25.22■■□□□ 1.63
GTF2IRD2B-202ENST00000418185 DCAF8L2P0C7V8 631 aa25.17■■□□□ 1.62
GTF2IRD2B-202ENST00000418185 SUPT5HO00267 1087 aaKnown RBP25.06■■□□□ 1.6
GTF2IRD2B-202ENST00000418185 EHMT2Q96KQ7 1210 aa24.09■■□□□ 1.45
GTF2IRD2B-202ENST00000418185 PCGF6Q9BYE7 350 aa23.83■■□□□ 1.41
GTF2IRD2B-202ENST00000418185 FAM9AQ8IZU1 332 aaPredicted RBP23.52■■□□□ 1.36
GTF2IRD2B-202ENST00000418185 LOC105371045A0A1W2PR82 267 aa23.44■■□□□ 1.34
GTF2IRD2B-202ENST00000418185 PPARGC1BQ86YN6 1023 aaKnown RBP23.44■■□□□ 1.34
GTF2IRD2B-202ENST00000418185 CHIC1Q5VXU3 224 aa23.33■■□□□ 1.33
GTF2IRD2B-202ENST00000418185 TTBK1Q5TCY1 1321 aaPredicted RBP23.21■■□□□ 1.31
GTF2IRD2B-202ENST00000418185 HRCP23327 699 aa23.06■■□□□ 1.28
GTF2IRD2B-202ENST00000418185 MYO15BQ96JP2 1530 aa22.84■■□□□ 1.25
GTF2IRD2B-202ENST00000418185 CCDC180Q9P1Z9 1646 aa22.81■■□□□ 1.24
GTF2IRD2B-202ENST00000418185 TRIM41Q8WV44 630 aa22.8■■□□□ 1.24
GTF2IRD2B-202ENST00000418185 ZCCHC6Q5VYS8 1495 aaKnown RBP22.72■■□□□ 1.23
GTF2IRD2B-202ENST00000418185 RANGAP1P46060 587 aaPredicted RBP22.55■■□□□ 1.2
GTF2IRD2B-202ENST00000418185 TRIM26Q12899 539 aaPredicted RBP22.48■■□□□ 1.19
GTF2IRD2B-202ENST00000418185 CCER1Q8TC90 406 aaPredicted RBP22.32■■□□□ 1.16
GTF2IRD2B-202ENST00000418185 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.31■■□□□ 1.16
GTF2IRD2B-202ENST00000418185 YTHDC1Q96MU7 727 aaKnown RBP22.13■■□□□ 1.13
GTF2IRD2B-202ENST00000418185 UBTFP17480 764 aaKnown RBP22.08■■□□□ 1.13
GTF2IRD2B-202ENST00000418185 DCAF1Q9Y4B6 1507 aa22.08■■□□□ 1.13
GTF2IRD2B-202ENST00000418185 ABCC9O60706 1549 aa22.01■■□□□ 1.11
GTF2IRD2B-202ENST00000418185 ZEB1P37275 1124 aaPredicted RBP21.92■■□□□ 1.1
GTF2IRD2B-202ENST00000418185 HNRNPUL2Q1KMD3 747 aaKnown RBP21.88■■□□□ 1.09
GTF2IRD2B-202ENST00000418185 SCRIBQ14160 1630 aa21.83■■□□□ 1.09
GTF2IRD2B-202ENST00000418185 PABPN1Q86U42 306 aaKnown RBP eCLIP21.82■■□□□ 1.08
GTF2IRD2B-202ENST00000418185 APLP2Q06481 763 aa21.69■■□□□ 1.06
GTF2IRD2B-202ENST00000418185 SCAF1Q9H7N4 1312 aaKnown RBP21.67■■□□□ 1.06
GTF2IRD2B-202ENST00000418185 DIEXFQ68CQ4 756 aaKnown RBP21.64■■□□□ 1.05
GTF2IRD2B-202ENST00000418185 ITGAEP38570 1179 aa21.63■■□□□ 1.05
GTF2IRD2B-202ENST00000418185 RSF1Q96T23 1441 aaPredicted RBP21.62■■□□□ 1.05
GTF2IRD2B-202ENST00000418185 GTF3C3Q9Y5Q9 886 aa21.55■■□□□ 1.04
GTF2IRD2B-202ENST00000418185 CENPBP07199 599 aaPredicted RBP21.53■■□□□ 1.04
GTF2IRD2B-202ENST00000418185 ATP1B4Q9UN42 357 aaPredicted RBP21.52■■□□□ 1.03
GTF2IRD2B-202ENST00000418185 NEUROD1Q13562 356 aa21.5■■□□□ 1.03
GTF2IRD2B-202ENST00000418185 CECR2Q9BXF3 1484 aa21.46■■□□□ 1.03
GTF2IRD2B-202ENST00000418185 RB1CC1Q8TDY2 1594 aa21.36■■□□□ 1.01
GTF2IRD2B-202ENST00000418185 ACIN1Q9UKV3 1341 aaKnown RBP21.31■■□□□ 1
GTF2IRD2B-202ENST00000418185 CSRNP3Q8WYN3 585 aa21.25■□□□□ 0.99
GTF2IRD2B-202ENST00000418185 ZNF316A6NFI3 1004 aaPredicted RBP21.11■□□□□ 0.97
GTF2IRD2B-202ENST00000418185 MIER1Q8N108 512 aa21.11■□□□□ 0.97
GTF2IRD2B-202ENST00000418185 MROH2BQ7Z745 1585 aa21.1■□□□□ 0.97
GTF2IRD2B-202ENST00000418185 PELP1Q8IZL8 1130 aaKnown RBP21.1■□□□□ 0.97
GTF2IRD2B-202ENST00000418185 NACADO15069 1562 aa21.06■□□□□ 0.96
GTF2IRD2B-202ENST00000418185 SOGA1O94964 1423 aa21.06■□□□□ 0.96
GTF2IRD2B-202ENST00000418185 CNGB1Q14028 1251 aaPredicted RBP21.04■□□□□ 0.96
GTF2IRD2B-202ENST00000418185 BCANQ96GW7 911 aa21.04■□□□□ 0.96
GTF2IRD2B-202ENST00000418185 ABCC8Q09428 1581 aa21.02■□□□□ 0.96
GTF2IRD2B-202ENST00000418185 P3H3Q8IVL6 736 aa21.01■□□□□ 0.95
GTF2IRD2B-202ENST00000418185 CEP162Q5TB80 1403 aa20.96■□□□□ 0.95
GTF2IRD2B-202ENST00000418185 CCDC88BA6NC98 1476 aa20.95■□□□□ 0.95
GTF2IRD2B-202ENST00000418185 HIRIP3Q9BW71 556 aaPredicted RBP20.92■□□□□ 0.94
GTF2IRD2B-202ENST00000418185 WIZO95785 1651 aa20.91■□□□□ 0.94
GTF2IRD2B-202ENST00000418185 RUSC2Q8N2Y8 1516 aa20.87■□□□□ 0.93
GTF2IRD2B-202ENST00000418185 FAM50AQ14320 339 aaKnown RBP20.87■□□□□ 0.93
GTF2IRD2B-202ENST00000418185 ARID3CA6NKF2 412 aa20.77■□□□□ 0.92
GTF2IRD2B-202ENST00000418185 CLIP1P30622 1438 aa20.67■□□□□ 0.9
GTF2IRD2B-202ENST00000418185 DDX10Q13206 875 aaKnown RBP20.63■□□□□ 0.89
GTF2IRD2B-202ENST00000418185 POLR3GLQ9BT43 218 aa20.63■□□□□ 0.89
GTF2IRD2B-202ENST00000418185 KANK4Q5T7N3 995 aaPredicted RBP20.62■□□□□ 0.89
GTF2IRD2B-202ENST00000418185 BAZ1AQ9NRL2 1556 aaPredicted RBP20.61■□□□□ 0.89
GTF2IRD2B-202ENST00000418185 TNIKQ9UKE5 1360 aa20.59■□□□□ 0.89
GTF2IRD2B-202ENST00000418185 WRNQ14191 1432 aaPredicted RBP eCLIP20.58■□□□□ 0.89
GTF2IRD2B-202ENST00000418185 EIF4G1Q04637 1599 aaKnown RBP20.57■□□□□ 0.88
GTF2IRD2B-202ENST00000418185 TRIM52Q96A61 297 aa20.56■□□□□ 0.88
GTF2IRD2B-202ENST00000418185 SENP3-EIF4A1A0A087X0R7 540 aa20.56■□□□□ 0.88
GTF2IRD2B-202ENST00000418185 KCNH8Q96L42 1107 aa20.55■□□□□ 0.88
GTF2IRD2B-202ENST00000418185 SIN3AQ96ST3 1273 aa20.51■□□□□ 0.87
GTF2IRD2B-202ENST00000418185 NEFLP07196 543 aa20.48■□□□□ 0.87
GTF2IRD2B-202ENST00000418185 GOLGA3Q08378 1498 aa20.48■□□□□ 0.87
GTF2IRD2B-202ENST00000418185 UNC13AQ9UPW8 1703 aa20.44■□□□□ 0.86
GTF2IRD2B-202ENST00000418185 IRX6P78412 446 aaPredicted RBP20.44■□□□□ 0.86
GTF2IRD2B-202ENST00000418185 FKBP8Q14318 412 aa20.44■□□□□ 0.86
GTF2IRD2B-202ENST00000418185 SMARCA4P51532 1647 aa20.41■□□□□ 0.86
GTF2IRD2B-202ENST00000418185 TOP2AP11388 1531 aaKnown RBP20.41■□□□□ 0.86
GTF2IRD2B-202ENST00000418185 CHIC2Q9UKJ5 165 aa20.36■□□□□ 0.85
GTF2IRD2B-202ENST00000418185 RAPGEF2Q9Y4G8 1499 aa20.34■□□□□ 0.85
GTF2IRD2B-202ENST00000418185 SMARCA2P51531 1590 aa20.31■□□□□ 0.84
GTF2IRD2B-202ENST00000418185 ZNF326Q5BKZ1 582 aaKnown RBP20.31■□□□□ 0.84
GTF2IRD2B-202ENST00000418185 SUPT16HQ9Y5B9 1047 aaKnown RBP20.28■□□□□ 0.84
GTF2IRD2B-202ENST00000418185 CEP164Q9UPV0 1460 aa20.25■□□□□ 0.83
GTF2IRD2B-202ENST00000418185 BAZ1BQ9UIG0 1483 aaKnown RBP20.22■□□□□ 0.83
GTF2IRD2B-202ENST00000418185 ERICH6Q7L0X2 663 aa20.22■□□□□ 0.83
GTF2IRD2B-202ENST00000418185 ANP32CO43423 234 aa20.22■□□□□ 0.83
GTF2IRD2B-202ENST00000418185 BICRAQ9NZM4 1560 aa20.22■□□□□ 0.83
GTF2IRD2B-202ENST00000418185 VPS8Q8N3P4 1428 aa20.2■□□□□ 0.82
GTF2IRD2B-202ENST00000418185 EEA1Q15075 1411 aa20.18■□□□□ 0.82
GTF2IRD2B-202ENST00000418185 RRP7BPQ9NSQ0 103 aa20.16■□□□□ 0.82
GTF2IRD2B-202ENST00000418185 HNRNPUQ00839 825 aaKnown RBP eCLIP20.15■□□□□ 0.82
GTF2IRD2B-202ENST00000418185 FAM9BQ8IZU0 186 aa20.11■□□□□ 0.81
GTF2IRD2B-202ENST00000418185 PEG3Q9GZU2 1588 aa20.11■□□□□ 0.81
GTF2IRD2B-202ENST00000418185 DHX57Q6P158 1386 aaKnown RBP20.08■□□□□ 0.8
GTF2IRD2B-202ENST00000418185 FBLN2P98095 1184 aa20.06■□□□□ 0.8
GTF2IRD2B-202ENST00000418185 FOXD1Q16676 465 aa20.05■□□□□ 0.8
GTF2IRD2B-202ENST00000418185 CCNB3Q8WWL7 1395 aa20.05■□□□□ 0.8
GTF2IRD2B-202ENST00000418185 SALL2Q9Y467 1007 aaPredicted RBP20.04■□□□□ 0.8
GTF2IRD2B-202ENST00000418185 ZNF777Q9ULD5 760 aaPredicted RBP20.03■□□□□ 0.8
GTF2IRD2B-202ENST00000418185 TONSLQ96HA7 1378 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms