RNA–Protein interactions for RNA: ENST00000410913.1

RN7SKP42-201, Transcript of RNA, 7SK small nuclear pseudogene 42, humanhuman

BASIC

Gene RN7SKP42, Length 300 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP42-201ENST00000410913 AQRO60306 1485 aaKnown RBP eCLIP13.73□□□□□ -0.21
RN7SKP42-201ENST00000410913 TMEM106CQ9BVX2 250 aa13.72□□□□□ -0.21
RN7SKP42-201ENST00000410913 GAPVD1Q14C86 1478 aa13.72□□□□□ -0.21
RN7SKP42-201ENST00000410913 ABCA5Q8WWZ7 1642 aa13.72□□□□□ -0.21
RN7SKP42-201ENST00000410913 PBRM1Q86U86 1689 aa13.71□□□□□ -0.21
RN7SKP42-201ENST00000410913 CHRM1P11229 460 aaPredicted RBP13.69□□□□□ -0.22
RN7SKP42-201ENST00000410913 IGF1RP08069 1367 aa13.69□□□□□ -0.22
RN7SKP42-201ENST00000410913 EIF4G3O43432 1585 aaKnown RBP13.68□□□□□ -0.22
RN7SKP42-201ENST00000410913 IER5LQ5T953 404 aa13.68□□□□□ -0.22
RN7SKP42-201ENST00000410913 PCDHB8Q9UN66 801 aa13.67□□□□□ -0.22
RN7SKP42-201ENST00000410913 POTEFA5A3E0 1075 aa13.66□□□□□ -0.22
RN7SKP42-201ENST00000410913 SEC24BO95487 1268 aa13.66□□□□□ -0.22
RN7SKP42-201ENST00000410913 ZNF467Q7Z7K2 595 aaPredicted RBP13.66□□□□□ -0.22
RN7SKP42-201ENST00000410913 MAMSTRQ6ZN01 415 aa13.65□□□□□ -0.22
RN7SKP42-201ENST00000410913 GRIN2BQ13224 1484 aa13.64□□□□□ -0.23
RN7SKP42-201ENST00000410913 CIZ1Q9ULV3 898 aaPredicted RBP13.64□□□□□ -0.23
RN7SKP42-201ENST00000410913 KIF21BO75037 1637 aa13.64□□□□□ -0.23
RN7SKP42-201ENST00000410913 ERICH3Q5RHP9 1530 aa13.64□□□□□ -0.23
RN7SKP42-201ENST00000410913 CARMIL1Q5VZK9 1371 aa13.63□□□□□ -0.23
RN7SKP42-201ENST00000410913 POTEJP0CG39 1038 aa13.63□□□□□ -0.23
RN7SKP42-201ENST00000410913 CUL7Q14999 1698 aa13.63□□□□□ -0.23
RN7SKP42-201ENST00000410913 UBTFP17480 764 aaKnown RBP13.62□□□□□ -0.23
RN7SKP42-201ENST00000410913 COLQQ9Y215 455 aaPredicted RBP13.61□□□□□ -0.23
RN7SKP42-201ENST00000410913 GOLGA3Q08378 1498 aa13.61□□□□□ -0.23
RN7SKP42-201ENST00000410913 PRXQ9BXM0 1461 aa13.61□□□□□ -0.23
RN7SKP42-201ENST00000410913 RAPGEF2Q9Y4G8 1499 aa13.6□□□□□ -0.23
RN7SKP42-201ENST00000410913 SCUBE2Q9NQ36 999 aa13.59□□□□□ -0.23
RN7SKP42-201ENST00000410913 SNAPC4Q5SXM2 1469 aa13.59□□□□□ -0.23
RN7SKP42-201ENST00000410913 ADAMTS12P58397 1594 aa13.56□□□□□ -0.24
RN7SKP42-201ENST00000410913 FHAD1B1AJZ9 1412 aa13.55□□□□□ -0.24
RN7SKP42-201ENST00000410913 MAGI1Q96QZ7 1491 aaPredicted RBP13.54□□□□□ -0.24
RN7SKP42-201ENST00000410913 PLCG2P16885 1265 aa13.53□□□□□ -0.24
RN7SKP42-201ENST00000410913 IRX5P78411 483 aaPredicted RBP13.52□□□□□ -0.25
RN7SKP42-201ENST00000410913 CHMP7Q8WUX9 453 aaPredicted RBP13.52□□□□□ -0.25
RN7SKP42-201ENST00000410913 TNIKQ9UKE5 1360 aa13.51□□□□□ -0.25
RN7SKP42-201ENST00000410913 RANGAP1P46060 587 aaPredicted RBP13.51□□□□□ -0.25
RN7SKP42-201ENST00000410913 PSEN1P49768 467 aa13.51□□□□□ -0.25
RN7SKP42-201ENST00000410913 SYNJ2O15056 1496 aa13.49□□□□□ -0.25
RN7SKP42-201ENST00000410913 PDAP1Q13442 181 aaKnown RBP13.49□□□□□ -0.25
RN7SKP42-201ENST00000410913 CHD1O14646 1710 aa13.49□□□□□ -0.25
RN7SKP42-201ENST00000410913 CTTNBP2Q8WZ74 1663 aa13.49□□□□□ -0.25
RN7SKP42-201ENST00000410913 OCEL1Q9H607 264 aa13.48□□□□□ -0.25
RN7SKP42-201ENST00000410913 GOLGA2Q08379 1002 aa13.47□□□□□ -0.25
RN7SKP42-201ENST00000410913 GRIN2AQ12879 1464 aa13.46□□□□□ -0.25
RN7SKP42-201ENST00000410913 MKRN3Q13064 507 aaKnown RBP13.45□□□□□ -0.26
RN7SKP42-201ENST00000410913 CEP162Q5TB80 1403 aa13.42□□□□□ -0.26
RN7SKP42-201ENST00000410913 CEP170Q5SW79 1584 aa13.4□□□□□ -0.26
RN7SKP42-201ENST00000410913 CLIP1P30622 1438 aa13.38□□□□□ -0.27
RN7SKP42-201ENST00000410913 IQGAP2Q13576 1575 aa13.37□□□□□ -0.27
RN7SKP42-201ENST00000410913 NUP160Q12769 1436 aa13.36□□□□□ -0.27
RN7SKP42-201ENST00000410913 KIAA0586Q9BVV6 1533 aa13.35□□□□□ -0.27
RN7SKP42-201ENST00000410913 P3H3Q8IVL6 736 aa13.35□□□□□ -0.27
RN7SKP42-201ENST00000410913 PDCD7Q8N8D1 485 aaKnown RBP13.35□□□□□ -0.27
RN7SKP42-201ENST00000410913 CABP2Q9NPB3 220 aa13.34□□□□□ -0.27
RN7SKP42-201ENST00000410913 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.34□□□□□ -0.27
RN7SKP42-201ENST00000410913 ARHGAP35Q9NRY4 1499 aa13.31□□□□□ -0.28
RN7SKP42-201ENST00000410913 SLAIN1Q8ND83 568 aa13.31□□□□□ -0.28
RN7SKP42-201ENST00000410913 RIOK3O14730 519 aaKnown RBP13.3□□□□□ -0.28
RN7SKP42-201ENST00000410913 JPH4Q96JJ6 628 aa13.3□□□□□ -0.28
RN7SKP42-201ENST00000410913 L3MBTL3Q96JM7 780 aaPredicted RBP13.29□□□□□ -0.28
RN7SKP42-201ENST00000410913 ILDR1Q86SU0 546 aaPredicted RBP13.28□□□□□ -0.28
RN7SKP42-201ENST00000410913 FAM163AQ96GL9 167 aaPredicted RBP13.28□□□□□ -0.28
RN7SKP42-201ENST00000410913 ARAP1Q96P48 1450 aa13.28□□□□□ -0.28
RN7SKP42-201ENST00000410913 EFCAB5A4FU69 1503 aa13.28□□□□□ -0.28
RN7SKP42-201ENST00000410913 UGGT2Q9NYU1 1516 aa13.28□□□□□ -0.28
RN7SKP42-201ENST00000410913 POTEMA6NI47 508 aa13.27□□□□□ -0.29
RN7SKP42-201ENST00000410913 RNF25Q96BH1 459 aaPredicted RBP13.27□□□□□ -0.29
RN7SKP42-201ENST00000410913 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.27□□□□□ -0.29
RN7SKP42-201ENST00000410913 FHOD3Q2V2M9 1422 aa13.27□□□□□ -0.29
RN7SKP42-201ENST00000410913 SAMD9Q5K651 1589 aa13.27□□□□□ -0.29
RN7SKP42-201ENST00000410913 TTBK1Q5TCY1 1321 aaPredicted RBP13.26□□□□□ -0.29
RN7SKP42-201ENST00000410913 CLASP1Q7Z460 1538 aa13.26□□□□□ -0.29
RN7SKP42-201ENST00000410913 POTEGQ6S5H5 508 aa13.25□□□□□ -0.29
RN7SKP42-201ENST00000410913 VGFO15240 615 aaPredicted RBP13.24□□□□□ -0.29
RN7SKP42-201ENST00000410913 KIAA0556O60303 1618 aa13.23□□□□□ -0.29
RN7SKP42-201ENST00000410913 DISP1Q96F81 1524 aa13.23□□□□□ -0.29
RN7SKP42-201ENST00000410913 CARMIL2Q6F5E8 1435 aa13.22□□□□□ -0.29
RN7SKP42-201ENST00000410913 PRG4Q92954 1404 aaPredicted RBP13.22□□□□□ -0.29
RN7SKP42-201ENST00000410913 SHROOM2Q13796 1616 aa13.22□□□□□ -0.29
RN7SKP42-201ENST00000410913 LCE2DQ5TA82 110 aaPredicted RBP13.22□□□□□ -0.29
RN7SKP42-201ENST00000410913 C3orf67Q6ZVT6 689 aa13.22□□□□□ -0.29
RN7SKP42-201ENST00000410913 VPS8Q8N3P4 1428 aa13.22□□□□□ -0.29
RN7SKP42-201ENST00000410913 ATP1B4Q9UN42 357 aaPredicted RBP13.21□□□□□ -0.29
RN7SKP42-201ENST00000410913 EFCAB3Q8N7B9 438 aa13.2□□□□□ -0.3
RN7SKP42-201ENST00000410913 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.19□□□□□ -0.3
RN7SKP42-201ENST00000410913 ZFP91Q96JP5 570 aaPredicted RBP13.19□□□□□ -0.3
RN7SKP42-201ENST00000410913 TAOK2Q9UL54 1235 aa13.19□□□□□ -0.3
RN7SKP42-201ENST00000410913 ERCC6L2Q5T890 1561 aa13.18□□□□□ -0.3
RN7SKP42-201ENST00000410913 ECM2O94769 699 aaPredicted RBP13.17□□□□□ -0.3
RN7SKP42-201ENST00000410913 DPY19L2Q6NUT2 758 aa13.17□□□□□ -0.3
RN7SKP42-201ENST00000410913 FMN1Q68DA7 1419 aa13.16□□□□□ -0.3
RN7SKP42-201ENST00000410913 G3V3G9 751 aa13.15□□□□□ -0.3
RN7SKP42-201ENST00000410913 PPARGC1BQ86YN6 1023 aaKnown RBP13.15□□□□□ -0.3
RN7SKP42-201ENST00000410913 PCF11O94913 1555 aaKnown RBP13.15□□□□□ -0.3
RN7SKP42-201ENST00000410913 BOLA1Q9Y3E2 137 aa13.14□□□□□ -0.31
RN7SKP42-201ENST00000410913 SNPHO15079 494 aa13.13□□□□□ -0.31
RN7SKP42-201ENST00000410913 SOX12O15370 315 aa13.13□□□□□ -0.31
RN7SKP42-201ENST00000410913 PTPRGP23470 1445 aa13.13□□□□□ -0.31
RN7SKP42-201ENST00000410913 PCDH10Q9P2E7 1040 aa13.11□□□□□ -0.31
RN7SKP42-201ENST00000410913 CASKIN1Q8WXD9 1431 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms