RNA–Protein interactions for RNA: ENST00000368012.3

NECTIN4-201, Transcript of nectin cell adhesion molecule 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECTIN4, Length 3,502 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4-201ENST00000368012 PTPN23Q9H3S7 1636 aa14.82□□□□□ -0.04
NECTIN4-201ENST00000368012 ABCA10Q8WWZ4 1543 aa14.81□□□□□ -0.04
NECTIN4-201ENST00000368012 CFDP1Q9UEE9 299 aaPredicted RBP14.81□□□□□ -0.04
NECTIN4-201ENST00000368012 KIF7Q2M1P5 1343 aa14.81□□□□□ -0.04
NECTIN4-201ENST00000368012 EFCAB5A4FU69 1503 aa14.8□□□□□ -0.04
NECTIN4-201ENST00000368012 PKD2Q13563 968 aa14.8□□□□□ -0.04
NECTIN4-201ENST00000368012 SNAPC4Q5SXM2 1469 aa14.79□□□□□ -0.04
NECTIN4-201ENST00000368012 AKNAQ7Z591 1439 aa14.79□□□□□ -0.04
NECTIN4-201ENST00000368012 CC2D1BQ5T0F9 858 aaKnown RBP14.78□□□□□ -0.04
NECTIN4-201ENST00000368012 DCAF11Q8TEB1 546 aa14.78□□□□□ -0.04
NECTIN4-201ENST00000368012 CCDC7Q96M83 1385 aa14.77□□□□□ -0.04
NECTIN4-201ENST00000368012 MYT1LQ9UL68 1186 aa14.77□□□□□ -0.05
NECTIN4-201ENST00000368012 IL27Q8NEV9 243 aa14.76□□□□□ -0.05
NECTIN4-201ENST00000368012 PLIN1O60240 522 aa14.76□□□□□ -0.05
NECTIN4-201ENST00000368012 CNTLNQ9NXG0 1405 aa14.75□□□□□ -0.05
NECTIN4-201ENST00000368012 DNMBPQ6XZF7 1577 aa14.75□□□□□ -0.05
NECTIN4-201ENST00000368012 ZBED9Q6R2W3 1325 aa14.75□□□□□ -0.05
NECTIN4-201ENST00000368012 SKAP1Q86WV1 359 aa14.75□□□□□ -0.05
NECTIN4-201ENST00000368012 GAPVD1Q14C86 1478 aa14.74□□□□□ -0.05
NECTIN4-201ENST00000368012 NUDCQ9Y266 331 aa14.74□□□□□ -0.05
NECTIN4-201ENST00000368012 EXOC6Q8TAG9 804 aa14.73□□□□□ -0.05
NECTIN4-201ENST00000368012 NEFMP07197 916 aa14.72□□□□□ -0.05
NECTIN4-201ENST00000368012 ST20-MTHFSA0A0A6YYL1 179 aa14.71□□□□□ -0.05
NECTIN4-201ENST00000368012 GRIN2BQ13224 1484 aa14.7□□□□□ -0.06
NECTIN4-201ENST00000368012 SLC4A3P48751 1232 aa14.7□□□□□ -0.06
NECTIN4-201ENST00000368012 CDK13Q14004 1512 aaKnown RBP14.7□□□□□ -0.06
NECTIN4-201ENST00000368012 KDM5BQ9UGL1 1544 aa14.7□□□□□ -0.06
NECTIN4-201ENST00000368012 MAGI3Q5TCQ9 1506 aa14.69□□□□□ -0.06
NECTIN4-201ENST00000368012 URB2Q14146 1524 aaKnown RBP14.69□□□□□ -0.06
NECTIN4-201ENST00000368012 TSPY4P0CV99 314 aa14.69□□□□□ -0.06
NECTIN4-201ENST00000368012 TSPY10P0CW01 314 aa14.69□□□□□ -0.06
NECTIN4-201ENST00000368012 IPO9Q96P70 1041 aaKnown RBP14.69□□□□□ -0.06
NECTIN4-201ENST00000368012 ARXQ96QS3 562 aa14.69□□□□□ -0.06
NECTIN4-201ENST00000368012 SENP3Q9H4L4 574 aaPredicted RBP14.69□□□□□ -0.06
NECTIN4-201ENST00000368012 PRDM2Q13029 1718 aa14.68□□□□□ -0.06
NECTIN4-201ENST00000368012 DENND4BO75064 1496 aaPredicted RBP14.68□□□□□ -0.06
NECTIN4-201ENST00000368012 KDM6BO15054 1643 aa14.68□□□□□ -0.06
NECTIN4-201ENST00000368012 EIF5BO60841 1220 aaKnown RBP14.68□□□□□ -0.06
NECTIN4-201ENST00000368012 ERICH6BQ5W0A0 696 aa14.67□□□□□ -0.06
NECTIN4-201ENST00000368012 SUPT6HQ7KZ85 1726 aaKnown RBP14.67□□□□□ -0.06
NECTIN4-201ENST00000368012 EHBP1L1Q8N3D4 1523 aa14.67□□□□□ -0.06
NECTIN4-201ENST00000368012 RGS3P49796 1198 aa14.66□□□□□ -0.06
NECTIN4-201ENST00000368012 CDCA7LQ96GN5 454 aa14.66□□□□□ -0.06
NECTIN4-201ENST00000368012 RCAN3Q9UKA8 241 aa14.66□□□□□ -0.06
NECTIN4-201ENST00000368012 NCOA1Q15788 1441 aa14.65□□□□□ -0.06
NECTIN4-201ENST00000368012 CHMP7Q8WUX9 453 aaPredicted RBP14.65□□□□□ -0.06
NECTIN4-201ENST00000368012 CUL7Q14999 1698 aa14.65□□□□□ -0.06
NECTIN4-201ENST00000368012 CTTNBP2Q8WZ74 1663 aa14.65□□□□□ -0.06
NECTIN4-201ENST00000368012 UGGT2Q9NYU1 1516 aa14.64□□□□□ -0.07
NECTIN4-201ENST00000368012 USP47Q96K76 1375 aa14.64□□□□□ -0.07
NECTIN4-201ENST00000368012 ANKRD30BQ9BXX2 1392 aa14.64□□□□□ -0.07
NECTIN4-201ENST00000368012 PDS5BQ9NTI5 1447 aa14.62□□□□□ -0.07
NECTIN4-201ENST00000368012 NUP155O75694 1391 aa14.62□□□□□ -0.07
NECTIN4-201ENST00000368012 EPRSP07814 1512 aaKnown RBP14.62□□□□□ -0.07
NECTIN4-201ENST00000368012 HNRNPMP52272 730 aaKnown RBP eCLIP14.61□□□□□ -0.07
NECTIN4-201ENST00000368012 LRRIQ1Q96JM4 1722 aa14.6□□□□□ -0.07
NECTIN4-201ENST00000368012 PLEKHD1A6NEE1 506 aa14.59□□□□□ -0.07
NECTIN4-201ENST00000368012 PDE4AP27815 886 aa14.59□□□□□ -0.07
NECTIN4-201ENST00000368012 CANXP27824 592 aaKnown RBP14.58□□□□□ -0.08
NECTIN4-201ENST00000368012 PNISRQ8TF01 805 aaKnown RBP14.58□□□□□ -0.08
NECTIN4-201ENST00000368012 SAMD9Q5K651 1589 aa14.57□□□□□ -0.08
NECTIN4-201ENST00000368012 DAPK1P53355 1430 aa14.57□□□□□ -0.08
NECTIN4-201ENST00000368012 RRP1P56182 461 aaKnown RBP14.57□□□□□ -0.08
NECTIN4-201ENST00000368012 NEUROD2Q15784 382 aa14.57□□□□□ -0.08
NECTIN4-201ENST00000368012 THOC2Q8NI27 1593 aaKnown RBP14.57□□□□□ -0.08
NECTIN4-201ENST00000368012 ABCC5O15440 1437 aa14.56□□□□□ -0.08
NECTIN4-201ENST00000368012 WDR43Q15061 677 aaKnown RBP eCLIP14.56□□□□□ -0.08
NECTIN4-201ENST00000368012 RPRD2Q5VT52 1461 aaKnown RBP14.56□□□□□ -0.08
NECTIN4-201ENST00000368012 MIA2Q96PC5 1412 aa14.55□□□□□ -0.08
NECTIN4-201ENST00000368012 CRBNQ96SW2 442 aa14.54□□□□□ -0.08
NECTIN4-201ENST00000368012 TCOF1Q13428 1488 aaKnown RBP14.54□□□□□ -0.08
NECTIN4-201ENST00000368012 TNNT2P45379 298 aaPredicted RBP14.53□□□□□ -0.08
NECTIN4-201ENST00000368012 ROCK2O75116 1388 aaKnown RBP14.53□□□□□ -0.08
NECTIN4-201ENST00000368012 ERCC6Q03468 1493 aa14.53□□□□□ -0.08
NECTIN4-201ENST00000368012 NBPF1Q3BBV0 1214 aa14.53□□□□□ -0.08
NECTIN4-201ENST00000368012 CCDC146Q8IYE0 955 aa14.52□□□□□ -0.08
NECTIN4-201ENST00000368012 PRG4Q92954 1404 aaPredicted RBP14.52□□□□□ -0.08
NECTIN4-201ENST00000368012 LAMC3Q9Y6N6 1575 aa14.51□□□□□ -0.09
NECTIN4-201ENST00000368012 TEX14Q8IWB6 1497 aa14.51□□□□□ -0.09
NECTIN4-201ENST00000368012 SPATA31E1Q6ZUB1 1445 aa14.51□□□□□ -0.09
NECTIN4-201ENST00000368012 HECW1Q76N89 1606 aa14.51□□□□□ -0.09
NECTIN4-201ENST00000368012 ARHGEF11O15085 1522 aa14.51□□□□□ -0.09
NECTIN4-201ENST00000368012 PANK3Q9H999 370 aa14.5□□□□□ -0.09
NECTIN4-201ENST00000368012 DHX29Q7Z478 1369 aaKnown RBP14.5□□□□□ -0.09
NECTIN4-201ENST00000368012 CHGAP10645 457 aaKnown RBP14.49□□□□□ -0.09
NECTIN4-201ENST00000368012 BRPF3Q9ULD4 1205 aa14.49□□□□□ -0.09
NECTIN4-201ENST00000368012 MYBBP1AQ9BQG0 1328 aaKnown RBP14.49□□□□□ -0.09
NECTIN4-201ENST00000368012 SMG6Q86US8 1419 aaKnown RBP14.49□□□□□ -0.09
NECTIN4-201ENST00000368012 TCERG1O14776 1098 aaKnown RBP14.49□□□□□ -0.09
NECTIN4-201ENST00000368012 ABCA5Q8WWZ7 1642 aa14.49□□□□□ -0.09
NECTIN4-201ENST00000368012 NLRP13Q86W25 1043 aa14.48□□□□□ -0.09
NECTIN4-201ENST00000368012 KNSTRNQ9Y448 316 aa14.48□□□□□ -0.09
NECTIN4-201ENST00000368012 IQGAP2Q13576 1575 aa14.47□□□□□ -0.09
NECTIN4-201ENST00000368012 KTN1Q86UP2 1357 aaKnown RBP14.47□□□□□ -0.09
NECTIN4-201ENST00000368012 RALBP1Q15311 655 aa14.46□□□□□ -0.09
NECTIN4-201ENST00000368012 FRAT1Q92837 279 aaPredicted RBP14.46□□□□□ -0.09
NECTIN4-201ENST00000368012 ROCK1Q13464 1354 aa14.46□□□□□ -0.09
NECTIN4-201ENST00000368012 C20orf194Q5TEA3 1177 aa14.46□□□□□ -0.09
NECTIN4-201ENST00000368012 KIF15Q9NS87 1388 aa14.46□□□□□ -0.09
NECTIN4-201ENST00000368012 SPRYD3Q8NCJ5 442 aa14.46□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms