RNA–Protein interactions for RNA: ENST00000367911.3

CCDC190-202, Transcript of coiled-coil domain containing 190, humanhuman

APPRIS P2 TSL 3 BASIC

Gene CCDC190, Length 1,395 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC190-202ENST00000367911 CCDC88BA6NC98 1476 aa10.66□□□□□ -0.7
CCDC190-202ENST00000367911 DCAF8Q5TAQ9 597 aa10.65□□□□□ -0.7
CCDC190-202ENST00000367911 URB2Q14146 1524 aaKnown RBP10.65□□□□□ -0.7
CCDC190-202ENST00000367911 ZBTB47Q9UFB7 747 aaPredicted RBP10.64□□□□□ -0.71
CCDC190-202ENST00000367911 PRDM2Q13029 1718 aa10.61□□□□□ -0.71
CCDC190-202ENST00000367911 ABCC8Q09428 1581 aa10.61□□□□□ -0.71
CCDC190-202ENST00000367911 TRIM41Q8WV44 630 aa10.6□□□□□ -0.71
CCDC190-202ENST00000367911 IFT140Q96RY7 1462 aa10.59□□□□□ -0.71
CCDC190-202ENST00000367911 C3orf67Q6ZVT6 689 aa10.57□□□□□ -0.72
CCDC190-202ENST00000367911 TOPBP1Q92547 1522 aa10.56□□□□□ -0.72
CCDC190-202ENST00000367911 DPY19L2Q6NUT2 758 aa10.54□□□□□ -0.72
CCDC190-202ENST00000367911 L3MBTL3Q96JM7 780 aaPredicted RBP10.52□□□□□ -0.72
CCDC190-202ENST00000367911 DNMBPQ6XZF7 1577 aa10.52□□□□□ -0.72
CCDC190-202ENST00000367911 ZNF608Q9ULD9 1512 aaPredicted RBP10.51□□□□□ -0.73
CCDC190-202ENST00000367911 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.51□□□□□ -0.73
CCDC190-202ENST00000367911 HOXB3P14651 431 aaPredicted RBP10.5□□□□□ -0.73
CCDC190-202ENST00000367911 MKRN3Q13064 507 aaKnown RBP10.5□□□□□ -0.73
CCDC190-202ENST00000367911 EIF4G3O43432 1585 aaKnown RBP10.46□□□□□ -0.74
CCDC190-202ENST00000367911 POLA1P09884 1462 aaPredicted RBP10.45□□□□□ -0.74
CCDC190-202ENST00000367911 GOLGA2Q08379 1002 aa10.45□□□□□ -0.74
CCDC190-202ENST00000367911 AQRO60306 1485 aaKnown RBP eCLIP10.44□□□□□ -0.74
CCDC190-202ENST00000367911 SOGA1O94964 1423 aa10.44□□□□□ -0.74
CCDC190-202ENST00000367911 TARBP1Q13395 1621 aaKnown RBP10.43□□□□□ -0.74
CCDC190-202ENST00000367911 PSEN1P49768 467 aa10.43□□□□□ -0.74
CCDC190-202ENST00000367911 ILDR1Q86SU0 546 aaPredicted RBP10.43□□□□□ -0.74
CCDC190-202ENST00000367911 RNF166Q96A37 237 aaPredicted RBP10.41□□□□□ -0.74
CCDC190-202ENST00000367911 WDR97A6NE52 1622 aa10.4□□□□□ -0.74
CCDC190-202ENST00000367911 HOXB1P14653 301 aaPredicted RBP10.4□□□□□ -0.74
CCDC190-202ENST00000367911 ZNF467Q7Z7K2 595 aaPredicted RBP10.4□□□□□ -0.74
CCDC190-202ENST00000367911 RIMBP3CA6NJZ7 1639 aa10.4□□□□□ -0.75
CCDC190-202ENST00000367911 RIMBP3BA6NNM3 1639 aa10.4□□□□□ -0.75
CCDC190-202ENST00000367911 RIMBP3Q9UFD9 1639 aa10.4□□□□□ -0.75
CCDC190-202ENST00000367911 ARHGEF11O15085 1522 aa10.4□□□□□ -0.75
CCDC190-202ENST00000367911 RAD54L2Q9Y4B4 1467 aa10.4□□□□□ -0.75
CCDC190-202ENST00000367911 FGD5Q6ZNL6 1462 aa10.39□□□□□ -0.75
CCDC190-202ENST00000367911 TDRD9Q8NDG6 1382 aaKnown RBP10.39□□□□□ -0.75
CCDC190-202ENST00000367911 FKBP8Q14318 412 aa10.39□□□□□ -0.75
CCDC190-202ENST00000367911 ERBB3P21860 1342 aa10.38□□□□□ -0.75
CCDC190-202ENST00000367911 CUX1P39880 1505 aa10.37□□□□□ -0.75
CCDC190-202ENST00000367911 CHMP7Q8WUX9 453 aaPredicted RBP10.36□□□□□ -0.75
CCDC190-202ENST00000367911 CYB5RLQ6IPT4 315 aa10.35□□□□□ -0.75
CCDC190-202ENST00000367911 BOLA1Q9Y3E2 137 aa10.35□□□□□ -0.75
CCDC190-202ENST00000367911 GRIN2BQ13224 1484 aa10.35□□□□□ -0.75
CCDC190-202ENST00000367911 SNAPC4Q5SXM2 1469 aa10.35□□□□□ -0.75
CCDC190-202ENST00000367911 MAGI1Q96QZ7 1491 aaPredicted RBP10.35□□□□□ -0.75
CCDC190-202ENST00000367911 CHD1O14646 1710 aa10.34□□□□□ -0.75
CCDC190-202ENST00000367911 ZNF710Q8N1W2 664 aa10.34□□□□□ -0.75
CCDC190-202ENST00000367911 CHRM1P11229 460 aaPredicted RBP10.33□□□□□ -0.76
CCDC190-202ENST00000367911 VARS2Q5ST30 1063 aaKnown RBP10.33□□□□□ -0.76
CCDC190-202ENST00000367911 GSE1Q14687 1217 aa10.32□□□□□ -0.76
CCDC190-202ENST00000367911 CABP2Q9NPB3 220 aa10.32□□□□□ -0.76
CCDC190-202ENST00000367911 MYT1LQ9UL68 1186 aa10.31□□□□□ -0.76
CCDC190-202ENST00000367911 GAPVD1Q14C86 1478 aa10.31□□□□□ -0.76
CCDC190-202ENST00000367911 SYNJ1O43426 1573 aa10.31□□□□□ -0.76
CCDC190-202ENST00000367911 SYNJ2O15056 1496 aa10.3□□□□□ -0.76
CCDC190-202ENST00000367911 KLHL34Q8N239 644 aa10.29□□□□□ -0.76
CCDC190-202ENST00000367911 WRNQ14191 1432 aaPredicted RBP eCLIP10.29□□□□□ -0.76
CCDC190-202ENST00000367911 ABCA10Q8WWZ4 1543 aa10.29□□□□□ -0.76
CCDC190-202ENST00000367911 ARAP1Q96P48 1450 aa10.28□□□□□ -0.76
CCDC190-202ENST00000367911 PDAP1Q13442 181 aaKnown RBP10.26□□□□□ -0.77
CCDC190-202ENST00000367911 DOK7Q18PE1 504 aa10.26□□□□□ -0.77
CCDC190-202ENST00000367911 TMEM92Q6UXU6 159 aa10.26□□□□□ -0.77
CCDC190-202ENST00000367911 CLASP1Q7Z460 1538 aa10.26□□□□□ -0.77
CCDC190-202ENST00000367911 G3V3G9 751 aa10.25□□□□□ -0.77
CCDC190-202ENST00000367911 ZNF687Q8N1G0 1237 aa10.24□□□□□ -0.77
CCDC190-202ENST00000367911 ABCA5Q8WWZ7 1642 aa10.24□□□□□ -0.77
CCDC190-202ENST00000367911 PBRM1Q86U86 1689 aa10.23□□□□□ -0.77
CCDC190-202ENST00000367911 TOP2BQ02880 1626 aa10.21□□□□□ -0.77
CCDC190-202ENST00000367911 GPR153Q6NV75 609 aa10.21□□□□□ -0.78
CCDC190-202ENST00000367911 BIVM-ERCC5R4GMW8 1640 aa10.2□□□□□ -0.78
CCDC190-202ENST00000367911 GRIN2AQ12879 1464 aa10.2□□□□□ -0.78
CCDC190-202ENST00000367911 FHAD1B1AJZ9 1412 aa10.19□□□□□ -0.78
CCDC190-202ENST00000367911 VASPP50552 380 aaPredicted RBP10.18□□□□□ -0.78
CCDC190-202ENST00000367911 EFCAB3Q8N7B9 438 aa10.17□□□□□ -0.78
CCDC190-202ENST00000367911 FBXO3Q9UK99 471 aa10.17□□□□□ -0.78
CCDC190-202ENST00000367911 ERICH3Q5RHP9 1530 aa10.17□□□□□ -0.78
CCDC190-202ENST00000367911 ADAMTS12P58397 1594 aa10.17□□□□□ -0.78
CCDC190-202ENST00000367911 HRCP23327 699 aa10.16□□□□□ -0.78
CCDC190-202ENST00000367911 ANKRD13DQ6ZTN6 518 aa10.16□□□□□ -0.78
CCDC190-202ENST00000367911 NUP160Q12769 1436 aa10.16□□□□□ -0.78
CCDC190-202ENST00000367911 RIMBP2O15034 1052 aa10.14□□□□□ -0.79
CCDC190-202ENST00000367911 KHSRPQ92945 711 aaKnown RBP eCLIP10.14□□□□□ -0.79
CCDC190-202ENST00000367911 ARSIQ5FYB1 569 aa10.13□□□□□ -0.79
CCDC190-202ENST00000367911 CEP170Q5SW79 1584 aa10.12□□□□□ -0.79
CCDC190-202ENST00000367911 MICALL2Q8IY33 904 aa10.12□□□□□ -0.79
CCDC190-202ENST00000367911 CIZ1Q9ULV3 898 aaPredicted RBP10.12□□□□□ -0.79
CCDC190-202ENST00000367911 TRIM26Q12899 539 aaPredicted RBP10.1□□□□□ -0.79
CCDC190-202ENST00000367911 ZSWIM6Q9HCJ5 1215 aa10.1□□□□□ -0.79
CCDC190-202ENST00000367911 JPH4Q96JJ6 628 aa10.09□□□□□ -0.79
CCDC190-202ENST00000367911 KIF27Q86VH2 1401 aa10.08□□□□□ -0.8
CCDC190-202ENST00000367911 SHROOM2Q13796 1616 aa10.08□□□□□ -0.8
CCDC190-202ENST00000367911 PRG4Q92954 1404 aaPredicted RBP10.07□□□□□ -0.8
CCDC190-202ENST00000367911 MS4A4AQ96JQ5 239 aa10.06□□□□□ -0.8
CCDC190-202ENST00000367911 ERCC6L2Q5T890 1561 aa10.06□□□□□ -0.8
CCDC190-202ENST00000367911 EEA1Q15075 1411 aa10.06□□□□□ -0.8
CCDC190-202ENST00000367911 PTGER2P43116 358 aa10.05□□□□□ -0.8
CCDC190-202ENST00000367911 IFNLR1Q8IU57 520 aaPredicted RBP10.05□□□□□ -0.8
CCDC190-202ENST00000367911 ZNF316A6NFI3 1004 aaPredicted RBP10.04□□□□□ -0.8
CCDC190-202ENST00000367911 LSM11P83369 360 aaKnown RBP eCLIP10.04□□□□□ -0.8
CCDC190-202ENST00000367911 IGF1RP08069 1367 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms