RNA–Protein interactions for RNA: ENST00000339948.3

ZNF648-201, Transcript of zinc finger protein 648, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF648, Length 3,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF648-201ENST00000339948 BIVM-ERCC5R4GMW8 1640 aa15.49■□□□□ 0.07
ZNF648-201ENST00000339948 CADPSQ9ULU8 1353 aa15.48■□□□□ 0.07
ZNF648-201ENST00000339948 HFM1A2PYH4 1435 aa15.47■□□□□ 0.07
ZNF648-201ENST00000339948 NCOA2Q15596 1464 aa15.47■□□□□ 0.07
ZNF648-201ENST00000339948 PKD2Q13563 968 aa15.46■□□□□ 0.07
ZNF648-201ENST00000339948 CDCA7LQ96GN5 454 aa15.45■□□□□ 0.06
ZNF648-201ENST00000339948 RGS3P49796 1198 aa15.44■□□□□ 0.06
ZNF648-201ENST00000339948 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.44■□□□□ 0.06
ZNF648-201ENST00000339948 CASKIN1Q8WXD9 1431 aa15.44■□□□□ 0.06
ZNF648-201ENST00000339948 HMGXB3Q12766 1538 aa15.44■□□□□ 0.06
ZNF648-201ENST00000339948 PDE4AP27815 886 aa15.44■□□□□ 0.06
ZNF648-201ENST00000339948 RCAN3Q9UKA8 241 aa15.44■□□□□ 0.06
ZNF648-201ENST00000339948 MYOM3Q5VTT5 1437 aa15.44■□□□□ 0.06
ZNF648-201ENST00000339948 DCAF11Q8TEB1 546 aa15.43■□□□□ 0.06
ZNF648-201ENST00000339948 ST20-MTHFSA0A0A6YYL1 179 aa15.42■□□□□ 0.06
ZNF648-201ENST00000339948 CFDP1Q9UEE9 299 aaPredicted RBP15.4■□□□□ 0.06
ZNF648-201ENST00000339948 RRP1P56182 461 aaKnown RBP15.39■□□□□ 0.05
ZNF648-201ENST00000339948 BRPF3Q9ULD4 1205 aa15.38■□□□□ 0.05
ZNF648-201ENST00000339948 USP47Q96K76 1375 aa15.38■□□□□ 0.05
ZNF648-201ENST00000339948 FYCO1Q9BQS8 1478 aa15.38■□□□□ 0.05
ZNF648-201ENST00000339948 PNISRQ8TF01 805 aaKnown RBP15.36■□□□□ 0.05
ZNF648-201ENST00000339948 FANCD2Q9BXW9 1451 aa15.36■□□□□ 0.05
ZNF648-201ENST00000339948 PTPN23Q9H3S7 1636 aa15.36■□□□□ 0.05
ZNF648-201ENST00000339948 CRBNQ96SW2 442 aa15.35■□□□□ 0.05
ZNF648-201ENST00000339948 NESP48681 1621 aa15.34■□□□□ 0.05
ZNF648-201ENST00000339948 NCOA1Q15788 1441 aa15.33■□□□□ 0.04
ZNF648-201ENST00000339948 MAP3K1Q13233 1512 aa15.33■□□□□ 0.04
ZNF648-201ENST00000339948 TCERG1O14776 1098 aaKnown RBP15.31■□□□□ 0.04
ZNF648-201ENST00000339948 SMG6Q86US8 1419 aaKnown RBP15.3■□□□□ 0.04
ZNF648-201ENST00000339948 PPM1GO15355 546 aaPredicted RBP15.28■□□□□ 0.04
ZNF648-201ENST00000339948 DNAJC5BQ9UF47 199 aa15.28■□□□□ 0.04
ZNF648-201ENST00000339948 C20orf194Q5TEA3 1177 aa15.28■□□□□ 0.04
ZNF648-201ENST00000339948 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.27■□□□□ 0.03
ZNF648-201ENST00000339948 CANXP27824 592 aaKnown RBP15.26■□□□□ 0.03
ZNF648-201ENST00000339948 POLA1P09884 1462 aaPredicted RBP15.26■□□□□ 0.03
ZNF648-201ENST00000339948 SENP3Q9H4L4 574 aaPredicted RBP15.26■□□□□ 0.03
ZNF648-201ENST00000339948 NUP155O75694 1391 aa15.26■□□□□ 0.03
ZNF648-201ENST00000339948 SPRYD3Q8NCJ5 442 aa15.26■□□□□ 0.03
ZNF648-201ENST00000339948 CDK13Q14004 1512 aaKnown RBP15.26■□□□□ 0.03
ZNF648-201ENST00000339948 BACH2Q9BYV9 841 aa15.25■□□□□ 0.03
ZNF648-201ENST00000339948 ANKRD30BQ9BXX2 1392 aa15.25■□□□□ 0.03
ZNF648-201ENST00000339948 TSPY4P0CV99 314 aa15.24■□□□□ 0.03
ZNF648-201ENST00000339948 TSPY10P0CW01 314 aa15.24■□□□□ 0.03
ZNF648-201ENST00000339948 NEUROD2Q15784 382 aa15.24■□□□□ 0.03
ZNF648-201ENST00000339948 CCDC146Q8IYE0 955 aa15.24■□□□□ 0.03
ZNF648-201ENST00000339948 MYBBP1AQ9BQG0 1328 aaKnown RBP15.24■□□□□ 0.03
ZNF648-201ENST00000339948 WDR43Q15061 677 aaKnown RBP eCLIP15.24■□□□□ 0.03
ZNF648-201ENST00000339948 SLKQ9H2G2 1235 aaPredicted RBP15.24■□□□□ 0.03
ZNF648-201ENST00000339948 NFKBIBQ15653 356 aa15.23■□□□□ 0.03
ZNF648-201ENST00000339948 NBPF1Q3BBV0 1214 aa15.22■□□□□ 0.03
ZNF648-201ENST00000339948 FRAT1Q92837 279 aaPredicted RBP15.22■□□□□ 0.03
ZNF648-201ENST00000339948 KDM6BO15054 1643 aa15.22■□□□□ 0.03
ZNF648-201ENST00000339948 ROCK2O75116 1388 aaKnown RBP15.22■□□□□ 0.03
ZNF648-201ENST00000339948 NLRP13Q86W25 1043 aa15.21■□□□□ 0.03
ZNF648-201ENST00000339948 PDS5BQ9NTI5 1447 aa15.21■□□□□ 0.03
ZNF648-201ENST00000339948 DDRGK1Q96HY6 314 aa15.21■□□□□ 0.03
ZNF648-201ENST00000339948 HNRNPMP52272 730 aaKnown RBP eCLIP15.21■□□□□ 0.02
ZNF648-201ENST00000339948 CFAP43Q8NDM7 1665 aa15.2■□□□□ 0.02
ZNF648-201ENST00000339948 GSE1Q14687 1217 aa15.2■□□□□ 0.02
ZNF648-201ENST00000339948 PANK3Q9H999 370 aa15.2■□□□□ 0.02
ZNF648-201ENST00000339948 KIF15Q9NS87 1388 aa15.2■□□□□ 0.02
ZNF648-201ENST00000339948 CC2D2AQ9P2K1 1620 aa15.19■□□□□ 0.02
ZNF648-201ENST00000339948 FRAT2O75474 233 aaPredicted RBP15.19■□□□□ 0.02
ZNF648-201ENST00000339948 KTN1Q86UP2 1357 aaKnown RBP15.19■□□□□ 0.02
ZNF648-201ENST00000339948 TNNT2P45379 298 aaPredicted RBP15.19■□□□□ 0.02
ZNF648-201ENST00000339948 DHX29Q7Z478 1369 aaKnown RBP15.19■□□□□ 0.02
ZNF648-201ENST00000339948 RALBP1Q15311 655 aa15.18■□□□□ 0.02
ZNF648-201ENST00000339948 SNAPC4Q5SXM2 1469 aa15.18■□□□□ 0.02
ZNF648-201ENST00000339948 GAPVD1Q14C86 1478 aa15.17■□□□□ 0.02
ZNF648-201ENST00000339948 TOPBP1Q92547 1522 aa15.17■□□□□ 0.02
ZNF648-201ENST00000339948 KDM5BQ9UGL1 1544 aa15.17■□□□□ 0.02
ZNF648-201ENST00000339948 DENND4BO75064 1496 aaPredicted RBP15.16■□□□□ 0.02
ZNF648-201ENST00000339948 EFCAB5A4FU69 1503 aa15.16■□□□□ 0.02
ZNF648-201ENST00000339948 PRDM2Q13029 1718 aa15.15■□□□□ 0.02
ZNF648-201ENST00000339948 ADAMTS8Q9UP79 889 aa15.15■□□□□ 0.02
ZNF648-201ENST00000339948 RPRD2Q5VT52 1461 aaKnown RBP15.14■□□□□ 0.01
ZNF648-201ENST00000339948 GZF1Q9H116 711 aaPredicted RBP15.14■□□□□ 0.01
ZNF648-201ENST00000339948 SUPT6HQ7KZ85 1726 aaKnown RBP15.13■□□□□ 0.01
ZNF648-201ENST00000339948 MAGI3Q5TCQ9 1506 aa15.13■□□□□ 0.01
ZNF648-201ENST00000339948 CHMP7Q8WUX9 453 aaPredicted RBP15.13■□□□□ 0.01
ZNF648-201ENST00000339948 KNSTRNQ9Y448 316 aa15.13■□□□□ 0.01
ZNF648-201ENST00000339948 DAPK1P53355 1430 aa15.12■□□□□ 0.01
ZNF648-201ENST00000339948 PLEKHD1A6NEE1 506 aa15.12■□□□□ 0.01
ZNF648-201ENST00000339948 EHBP1L1Q8N3D4 1523 aa15.12■□□□□ 0.01
ZNF648-201ENST00000339948 ABCC5O15440 1437 aa15.11■□□□□ 0.01
ZNF648-201ENST00000339948 USP35Q9P2H5 1018 aa15.1■□□□□ 0.01
ZNF648-201ENST00000339948 PRG4Q92954 1404 aaPredicted RBP15.1■□□□□ 0.01
ZNF648-201ENST00000339948 ARID4BQ4LE39 1312 aaPredicted RBP15.1■□□□□ 0.01
ZNF648-201ENST00000339948 ABCA10Q8WWZ4 1543 aa15.1■□□□□ 0.01
ZNF648-201ENST00000339948 BCL2L13Q9BXK5 485 aa15.1■□□□□ 0.01
ZNF648-201ENST00000339948 GRIN2BQ13224 1484 aa15.1■□□□□ 0.01
ZNF648-201ENST00000339948 RNF123Q5XPI4 1314 aa15.09■□□□□ 0.01
ZNF648-201ENST00000339948 EPRSP07814 1512 aaKnown RBP15.09■□□□□ 0.01
ZNF648-201ENST00000339948 MS4A1P11836 297 aa15.09■□□□□ 0.01
ZNF648-201ENST00000339948 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.09■□□□□ 0.01
ZNF648-201ENST00000339948 CLUAP1Q96AJ1 413 aa15.08■□□□□ 0
ZNF648-201ENST00000339948 BRD4O60885 1362 aaPredicted RBP15.07■□□□□ 0
ZNF648-201ENST00000339948 SPATA31E1Q6ZUB1 1445 aa15.07■□□□□ 0
ZNF648-201ENST00000339948 BCAR3O75815 825 aa15.07■□□□□ 0
ZNF648-201ENST00000339948 FAM161AQ3B820 660 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms