RNA–Protein interactions for RNA: ENST00000263335.11

PAX8-202, Transcript of paired box 8, humanhuman

TSL 1 (best) BASIC

Gene PAX8, Length 3,735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX8-202ENST00000263335 SNAPC4Q5SXM2 1469 aa17.67■□□□□ 0.42
PAX8-202ENST00000263335 FANCD2Q9BXW9 1451 aa17.66■□□□□ 0.42
PAX8-202ENST00000263335 DENND4BO75064 1496 aaPredicted RBP17.66■□□□□ 0.42
PAX8-202ENST00000263335 DNAJC5BQ9UF47 199 aa17.64■□□□□ 0.41
PAX8-202ENST00000263335 KDM6BO15054 1643 aa17.63■□□□□ 0.41
PAX8-202ENST00000263335 SMG6Q86US8 1419 aaKnown RBP17.62■□□□□ 0.41
PAX8-202ENST00000263335 ZNF644Q9H582 1327 aaPredicted RBP17.62■□□□□ 0.41
PAX8-202ENST00000263335 NEFMP07197 916 aa17.62■□□□□ 0.41
PAX8-202ENST00000263335 EXOC6Q8TAG9 804 aa17.62■□□□□ 0.41
PAX8-202ENST00000263335 POLA1P09884 1462 aaPredicted RBP17.62■□□□□ 0.41
PAX8-202ENST00000263335 PRKCSHP14314 528 aaPredicted RBP17.61■□□□□ 0.41
PAX8-202ENST00000263335 DAXXQ9UER7 740 aaPredicted RBP17.6■□□□□ 0.41
PAX8-202ENST00000263335 SKAP1Q86WV1 359 aa17.58■□□□□ 0.41
PAX8-202ENST00000263335 KDM2AQ9Y2K7 1162 aa17.58■□□□□ 0.4
PAX8-202ENST00000263335 ZNF777Q9ULD5 760 aaPredicted RBP17.57■□□□□ 0.4
PAX8-202ENST00000263335 SUPT6HQ7KZ85 1726 aaKnown RBP17.57■□□□□ 0.4
PAX8-202ENST00000263335 ANKRD30BQ9BXX2 1392 aa17.56■□□□□ 0.4
PAX8-202ENST00000263335 PNISRQ8TF01 805 aaKnown RBP17.56■□□□□ 0.4
PAX8-202ENST00000263335 ABCA10Q8WWZ4 1543 aa17.55■□□□□ 0.4
PAX8-202ENST00000263335 ARXQ96QS3 562 aa17.55■□□□□ 0.4
PAX8-202ENST00000263335 MAGI3Q5TCQ9 1506 aa17.55■□□□□ 0.4
PAX8-202ENST00000263335 GRIN2BQ13224 1484 aa17.55■□□□□ 0.4
PAX8-202ENST00000263335 NESP48681 1621 aa17.54■□□□□ 0.4
PAX8-202ENST00000263335 USP47Q96K76 1375 aa17.54■□□□□ 0.4
PAX8-202ENST00000263335 PDE4AP27815 886 aa17.54■□□□□ 0.4
PAX8-202ENST00000263335 TOPBP1Q92547 1522 aa17.54■□□□□ 0.4
PAX8-202ENST00000263335 EHBP1L1Q8N3D4 1523 aa17.53■□□□□ 0.4
PAX8-202ENST00000263335 PLIN1O60240 522 aa17.52■□□□□ 0.4
PAX8-202ENST00000263335 DHX29Q7Z478 1369 aaKnown RBP17.52■□□□□ 0.4
PAX8-202ENST00000263335 UGGT2Q9NYU1 1516 aa17.52■□□□□ 0.4
PAX8-202ENST00000263335 RRP1P56182 461 aaKnown RBP17.51■□□□□ 0.39
PAX8-202ENST00000263335 CARD11Q9BXL7 1154 aa17.51■□□□□ 0.39
PAX8-202ENST00000263335 RCAN3Q9UKA8 241 aa17.51■□□□□ 0.39
PAX8-202ENST00000263335 RNF123Q5XPI4 1314 aa17.51■□□□□ 0.39
PAX8-202ENST00000263335 LRRIQ1Q96JM4 1722 aa17.5■□□□□ 0.39
PAX8-202ENST00000263335 RPRD2Q5VT52 1461 aaKnown RBP17.5■□□□□ 0.39
PAX8-202ENST00000263335 SPATA31E1Q6ZUB1 1445 aa17.5■□□□□ 0.39
PAX8-202ENST00000263335 CTTNBP2Q8WZ74 1663 aa17.5■□□□□ 0.39
PAX8-202ENST00000263335 PKD2Q13563 968 aa17.49■□□□□ 0.39
PAX8-202ENST00000263335 CDK13Q14004 1512 aaKnown RBP17.49■□□□□ 0.39
PAX8-202ENST00000263335 SLC4A3P48751 1232 aa17.48■□□□□ 0.39
PAX8-202ENST00000263335 HECW1Q76N89 1606 aa17.48■□□□□ 0.39
PAX8-202ENST00000263335 PRDM2Q13029 1718 aa17.47■□□□□ 0.39
PAX8-202ENST00000263335 CDCA7LQ96GN5 454 aa17.47■□□□□ 0.39
PAX8-202ENST00000263335 TCERG1O14776 1098 aaKnown RBP17.46■□□□□ 0.39
PAX8-202ENST00000263335 TEX14Q8IWB6 1497 aa17.46■□□□□ 0.39
PAX8-202ENST00000263335 DNMBPQ6XZF7 1577 aa17.46■□□□□ 0.39
PAX8-202ENST00000263335 ST20-MTHFSA0A0A6YYL1 179 aa17.46■□□□□ 0.39
PAX8-202ENST00000263335 CUL7Q14999 1698 aa17.44■□□□□ 0.38
PAX8-202ENST00000263335 GAPVD1Q14C86 1478 aa17.43■□□□□ 0.38
PAX8-202ENST00000263335 CC2D2AQ9P2K1 1620 aa17.43■□□□□ 0.38
PAX8-202ENST00000263335 BACH2Q9BYV9 841 aa17.43■□□□□ 0.38
PAX8-202ENST00000263335 TCOF1Q13428 1488 aaKnown RBP17.42■□□□□ 0.38
PAX8-202ENST00000263335 DAPK1P53355 1430 aa17.41■□□□□ 0.38
PAX8-202ENST00000263335 EPRSP07814 1512 aaKnown RBP17.41■□□□□ 0.38
PAX8-202ENST00000263335 GCC2Q8IWJ2 1684 aa17.4■□□□□ 0.38
PAX8-202ENST00000263335 CFDP1Q9UEE9 299 aaPredicted RBP17.4■□□□□ 0.38
PAX8-202ENST00000263335 BRPF3Q9ULD4 1205 aa17.4■□□□□ 0.38
PAX8-202ENST00000263335 DCAF11Q8TEB1 546 aa17.4■□□□□ 0.38
PAX8-202ENST00000263335 ABCC5O15440 1437 aa17.4■□□□□ 0.38
PAX8-202ENST00000263335 CC2D1BQ5T0F9 858 aaKnown RBP17.39■□□□□ 0.38
PAX8-202ENST00000263335 SAMD9Q5K651 1589 aa17.39■□□□□ 0.37
PAX8-202ENST00000263335 MYBBP1AQ9BQG0 1328 aaKnown RBP17.38■□□□□ 0.37
PAX8-202ENST00000263335 MIA2Q96PC5 1412 aa17.38■□□□□ 0.37
PAX8-202ENST00000263335 PPM1GO15355 546 aaPredicted RBP17.37■□□□□ 0.37
PAX8-202ENST00000263335 CRBNQ96SW2 442 aa17.37■□□□□ 0.37
PAX8-202ENST00000263335 ARHGEF11O15085 1522 aa17.37■□□□□ 0.37
PAX8-202ENST00000263335 KIF15Q9NS87 1388 aa17.37■□□□□ 0.37
PAX8-202ENST00000263335 THOC2Q8NI27 1593 aaKnown RBP17.36■□□□□ 0.37
PAX8-202ENST00000263335 BCORL1Q5H9F3 1711 aa17.35■□□□□ 0.37
PAX8-202ENST00000263335 RGL3Q3MIN7 710 aa17.34■□□□□ 0.37
PAX8-202ENST00000263335 RALBP1Q15311 655 aa17.33■□□□□ 0.37
PAX8-202ENST00000263335 URB2Q14146 1524 aaKnown RBP17.33■□□□□ 0.36
PAX8-202ENST00000263335 FBLN2P98095 1184 aa17.33■□□□□ 0.36
PAX8-202ENST00000263335 USP35Q9P2H5 1018 aa17.33■□□□□ 0.36
PAX8-202ENST00000263335 C20orf194Q5TEA3 1177 aa17.32■□□□□ 0.36
PAX8-202ENST00000263335 ROCK1Q13464 1354 aa17.31■□□□□ 0.36
PAX8-202ENST00000263335 NLRP13Q86W25 1043 aa17.31■□□□□ 0.36
PAX8-202ENST00000263335 BRD4O60885 1362 aaPredicted RBP17.3■□□□□ 0.36
PAX8-202ENST00000263335 MS4A1P11836 297 aa17.3■□□□□ 0.36
PAX8-202ENST00000263335 NFKBIBQ15653 356 aa17.3■□□□□ 0.36
PAX8-202ENST00000263335 NUP155O75694 1391 aa17.3■□□□□ 0.36
PAX8-202ENST00000263335 ROCK2O75116 1388 aaKnown RBP17.29■□□□□ 0.36
PAX8-202ENST00000263335 GSE1Q14687 1217 aa17.29■□□□□ 0.36
PAX8-202ENST00000263335 RGS3P49796 1198 aa17.29■□□□□ 0.36
PAX8-202ENST00000263335 PZPP20742 1482 aa17.29■□□□□ 0.36
PAX8-202ENST00000263335 DDRGK1Q96HY6 314 aa17.29■□□□□ 0.36
PAX8-202ENST00000263335 LRPPRCP42704 1394 aaKnown RBP17.29■□□□□ 0.36
PAX8-202ENST00000263335 KIAA1107Q9UPP5 1409 aa17.28■□□□□ 0.36
PAX8-202ENST00000263335 FRAT1Q92837 279 aaPredicted RBP17.27■□□□□ 0.36
PAX8-202ENST00000263335 ARID4BQ4LE39 1312 aaPredicted RBP17.27■□□□□ 0.35
PAX8-202ENST00000263335 KTN1Q86UP2 1357 aaKnown RBP17.27■□□□□ 0.35
PAX8-202ENST00000263335 ABCA5Q8WWZ7 1642 aa17.26■□□□□ 0.35
PAX8-202ENST00000263335 PDS5BQ9NTI5 1447 aa17.25■□□□□ 0.35
PAX8-202ENST00000263335 LAMC3Q9Y6N6 1575 aa17.25■□□□□ 0.35
PAX8-202ENST00000263335 PDE3BQ13370 1112 aa17.24■□□□□ 0.35
PAX8-202ENST00000263335 PRG4Q92954 1404 aaPredicted RBP17.24■□□□□ 0.35
PAX8-202ENST00000263335 NBPF1Q3BBV0 1214 aa17.23■□□□□ 0.35
PAX8-202ENST00000263335 ERCC6Q03468 1493 aa17.22■□□□□ 0.35
PAX8-202ENST00000263335 WASHC2CQ9Y4E1 1318 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms