RNA–Protein interactions for RNA: ENSMUST00000193170.1

Ccdc71-202, Transcript of Coiled-coil domain-containing protein 71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc71, Length 3,044 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc71-202ENSMUST00000193170 Cttnbp2B9EJA2 1648 aa12.61□□□□□ -0.39
Ccdc71-202ENSMUST00000193170 Fam43bA2AM80 330 aa12.61□□□□□ -0.39
Ccdc71-202ENSMUST00000193170 BcanQ61361 883 aa12.61□□□□□ -0.39
Ccdc71-202ENSMUST00000193170 Sparcl1P70663 650 aa12.6□□□□□ -0.39
Ccdc71-202ENSMUST00000193170 DekQ7TNV0 380 aaKnown RBP12.6□□□□□ -0.39
Ccdc71-202ENSMUST00000193170 Ggt6Q6PDE7 497 aa12.58□□□□□ -0.4
Ccdc71-202ENSMUST00000193170 Fmn1Q05860 1466 aa12.58□□□□□ -0.4
Ccdc71-202ENSMUST00000193170 WdpcpQ8C456 722 aa12.57□□□□□ -0.4
Ccdc71-202ENSMUST00000193170 Atf5O70191 283 aa12.54□□□□□ -0.4
Ccdc71-202ENSMUST00000193170 Ercc6F8VPZ5 1481 aa12.53□□□□□ -0.4
Ccdc71-202ENSMUST00000193170 Wwc1Q5SXA9 1104 aa12.52□□□□□ -0.41
Ccdc71-202ENSMUST00000193170 Arid4aF8VPQ2 1261 aaKnown RBP12.51□□□□□ -0.41
Ccdc71-202ENSMUST00000193170 TprnA2AI08 749 aaKnown RBP12.51□□□□□ -0.41
Ccdc71-202ENSMUST00000193170 Mfap1aC0HKD8 439 aaKnown RBP12.5□□□□□ -0.41
Ccdc71-202ENSMUST00000193170 Mfap1bC0HKD9 439 aaKnown RBP12.5□□□□□ -0.41
Ccdc71-202ENSMUST00000193170 Erich6D3Z6S9 713 aa12.5□□□□□ -0.41
Ccdc71-202ENSMUST00000193170 Wdr62Q3U3T8 1523 aa12.5□□□□□ -0.41
Ccdc71-202ENSMUST00000193170 Frmpd1A2AKB4 1549 aa12.49□□□□□ -0.41
Ccdc71-202ENSMUST00000193170 Ncoa4Q5U4H9 625 aa12.48□□□□□ -0.41
Ccdc71-202ENSMUST00000193170 Stard8Q8K031 1019 aa12.48□□□□□ -0.41
Ccdc71-202ENSMUST00000193170 Kcng1A2BDX4 514 aa12.47□□□□□ -0.41
Ccdc71-202ENSMUST00000193170 Eif4g1Q6NZJ6 1600 aaKnown RBP12.46□□□□□ -0.42
Ccdc71-202ENSMUST00000193170 Arap1Q4LDD4 1452 aa12.45□□□□□ -0.42
Ccdc71-202ENSMUST00000193170 Kdm5bQ80Y84 1544 aa12.45□□□□□ -0.42
Ccdc71-202ENSMUST00000193170 Exoc8Q6PGF7 716 aa12.44□□□□□ -0.42
Ccdc71-202ENSMUST00000193170 PtprkP35822 1457 aa12.44□□□□□ -0.42
Ccdc71-202ENSMUST00000193170 Il27Q8K3I6 234 aa12.43□□□□□ -0.42
Ccdc71-202ENSMUST00000193170 Rpap1Q80TE0 1409 aa12.43□□□□□ -0.42
Ccdc71-202ENSMUST00000193170 Znf710Q3U288 666 aa12.42□□□□□ -0.42
Ccdc71-202ENSMUST00000193170 Kdm4aQ8BW72 1064 aa12.42□□□□□ -0.42
Ccdc71-202ENSMUST00000193170 Arhgap35Q91YM2 1499 aa12.42□□□□□ -0.42
Ccdc71-202ENSMUST00000193170 Rab11fip3Q8CHD8 1047 aa12.41□□□□□ -0.42
Ccdc71-202ENSMUST00000193170 Mtmr7Q9Z2C9 660 aa12.39□□□□□ -0.43
Ccdc71-202ENSMUST00000193170 Fam135aQ6NS59 1506 aa12.39□□□□□ -0.43
Ccdc71-202ENSMUST00000193170 Tnnt3Q9QZ47 272 aa12.38□□□□□ -0.43
Ccdc71-202ENSMUST00000193170 Ppm1gQ61074 542 aa12.37□□□□□ -0.43
Ccdc71-202ENSMUST00000193170 Setd5Q5XJV7 1441 aa12.37□□□□□ -0.43
Ccdc71-202ENSMUST00000193170 Eea1Q8BL66 1411 aa12.36□□□□□ -0.43
Ccdc71-202ENSMUST00000193170 Unc13aQ4KUS2 1712 aa12.35□□□□□ -0.43
Ccdc71-202ENSMUST00000193170 Nolc1E9Q5C9 702 aaKnown RBP12.35□□□□□ -0.43
Ccdc71-202ENSMUST00000193170 Chmp4bQ9D8B3 224 aaKnown RBP12.35□□□□□ -0.43
Ccdc71-202ENSMUST00000193170 Phldb1Q6PDH0 1371 aaKnown RBP12.34□□□□□ -0.43
Ccdc71-202ENSMUST00000193170 Polr3glQ8R0C0 218 aa12.34□□□□□ -0.43
Ccdc71-202ENSMUST00000193170 AqrQ8CFQ3 1481 aaKnown RBP12.34□□□□□ -0.43
Ccdc71-202ENSMUST00000193170 Lmod2Q3UHZ5 550 aa12.33□□□□□ -0.44
Ccdc71-202ENSMUST00000193170 Slc24a1Q91WD8 1130 aa12.33□□□□□ -0.44
Ccdc71-202ENSMUST00000193170 Hspa5P20029 655 aaKnown RBP12.32□□□□□ -0.44
Ccdc71-202ENSMUST00000193170 Arhgef5E9Q7D5 1581 aa12.32□□□□□ -0.44
Ccdc71-202ENSMUST00000193170 Rsph6aQ8CDR2 708 aa12.32□□□□□ -0.44
Ccdc71-202ENSMUST00000193170 VaspP70460 375 aaKnown RBP12.31□□□□□ -0.44
Ccdc71-202ENSMUST00000193170 AampJ3QN89 436 aa12.31□□□□□ -0.44
Ccdc71-202ENSMUST00000193170 Baz1bQ9Z277 1479 aa12.31□□□□□ -0.44
Ccdc71-202ENSMUST00000193170 BlmO88700 1416 aa12.3□□□□□ -0.44
Ccdc71-202ENSMUST00000193170 Sin3aQ60520 1274 aaKnown RBP12.29□□□□□ -0.44
Ccdc71-202ENSMUST00000193170 Klhl34A2AI76 644 aa12.28□□□□□ -0.44
Ccdc71-202ENSMUST00000193170 Mak16Q8BGS0 296 aaKnown RBP12.28□□□□□ -0.44
Ccdc71-202ENSMUST00000193170 Sox12Q04890 314 aa12.27□□□□□ -0.45
Ccdc71-202ENSMUST00000193170 Zbtb22Q9Z0G7 638 aa12.27□□□□□ -0.45
Ccdc71-202ENSMUST00000193170 E2f4Q8R0K9 410 aa12.27□□□□□ -0.45
Ccdc71-202ENSMUST00000193170 Anp32aO35381 247 aa12.26□□□□□ -0.45
Ccdc71-202ENSMUST00000193170 Klf15Q9EPW2 415 aa12.26□□□□□ -0.45
Ccdc71-202ENSMUST00000193170 Ccdc18Q640L5 1455 aa12.26□□□□□ -0.45
Ccdc71-202ENSMUST00000193170 Zc3h15Q3TIV5 426 aaKnown RBP12.26□□□□□ -0.45
Ccdc71-202ENSMUST00000193170 Ccdc85aQ5SP85 500 aa12.26□□□□□ -0.45
Ccdc71-202ENSMUST00000193170 4933402E13RikQ9D4D2 429 aa12.26□□□□□ -0.45
Ccdc71-202ENSMUST00000193170 Calr4Q3TQS0 420 aa12.25□□□□□ -0.45
Ccdc71-202ENSMUST00000193170 Naip1Q9QWK5 1403 aa12.24□□□□□ -0.45
Ccdc71-202ENSMUST00000193170 MccE9PWI3 1003 aa12.24□□□□□ -0.45
Ccdc71-202ENSMUST00000193170 NrkQ9R0G8 1455 aa12.24□□□□□ -0.45
Ccdc71-202ENSMUST00000193170 Rtl5Q5DTT4 599 aa12.23□□□□□ -0.45
Ccdc71-202ENSMUST00000193170 Dhx30Q99PU8 1217 aaKnown RBP12.23□□□□□ -0.45
Ccdc71-202ENSMUST00000193170 Tiam1Q60610 1591 aa12.22□□□□□ -0.45
Ccdc71-202ENSMUST00000193170 Ubl4bQ9CQ84 188 aa12.21□□□□□ -0.46
Ccdc71-202ENSMUST00000193170 Sh3bp5Q9Z131 463 aa12.21□□□□□ -0.46
Ccdc71-202ENSMUST00000193170 TnnQ80Z71 1560 aa12.2□□□□□ -0.46
Ccdc71-202ENSMUST00000193170 3425401B19RikD3Z1D3 1412 aa12.19□□□□□ -0.46
Ccdc71-202ENSMUST00000193170 Znf704Q9ERQ3 566 aa12.19□□□□□ -0.46
Ccdc71-202ENSMUST00000193170 Slx4Q6P1D7 1565 aa12.18□□□□□ -0.46
Ccdc71-202ENSMUST00000193170 TchhA0A0B4J1F9 1599 aa12.17□□□□□ -0.46
Ccdc71-202ENSMUST00000193170 Themis2Q91YX0 663 aa12.17□□□□□ -0.46
Ccdc71-202ENSMUST00000193170 SetQ9EQU5 289 aaKnown RBP12.17□□□□□ -0.46
Ccdc71-202ENSMUST00000193170 Neurod2Q62414 383 aa12.16□□□□□ -0.46
Ccdc71-202ENSMUST00000193170 Clstn1Q9EPL2 979 aa12.16□□□□□ -0.46
Ccdc71-202ENSMUST00000193170 Supt16hQ920B9 1047 aa12.16□□□□□ -0.46
Ccdc71-202ENSMUST00000193170 Shroom4Q1W617 1475 aa12.15□□□□□ -0.46
Ccdc71-202ENSMUST00000193170 Stra8P70278 393 aa12.15□□□□□ -0.46
Ccdc71-202ENSMUST00000193170 P3h3Q8CG70 732 aa12.15□□□□□ -0.46
Ccdc71-202ENSMUST00000193170 Kif15Q6P9L6 1387 aa12.14□□□□□ -0.47
Ccdc71-202ENSMUST00000193170 Lamc3Q9R0B6 1581 aa12.14□□□□□ -0.47
Ccdc71-202ENSMUST00000193170 Dhx29Q6PGC1 1365 aaKnown RBP12.14□□□□□ -0.47
Ccdc71-202ENSMUST00000193170 Ppp4r2Q0VGB7 417 aa12.14□□□□□ -0.47
Ccdc71-202ENSMUST00000193170 Ankrd26Q811D2 1581 aa12.13□□□□□ -0.47
Ccdc71-202ENSMUST00000193170 Chrm1P12657 460 aa12.12□□□□□ -0.47
Ccdc71-202ENSMUST00000193170 Pcf11G3X9Z4 1553 aa12.12□□□□□ -0.47
Ccdc71-202ENSMUST00000193170 NgefQ8CHT1 710 aa12.12□□□□□ -0.47
Ccdc71-202ENSMUST00000193170 Secisbp2lQ6A098 1086 aaKnown RBP12.11□□□□□ -0.47
Ccdc71-202ENSMUST00000193170 UacaQ8CGB3 1411 aa12.11□□□□□ -0.47
Ccdc71-202ENSMUST00000193170 Chic2Q9D9G3 165 aa12.11□□□□□ -0.47
Ccdc71-202ENSMUST00000193170 Ccdc9Q8VC31 543 aaKnown RBP12.1□□□□□ -0.47
Ccdc71-202ENSMUST00000193170 Smg6P61406 1418 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 11 ms