RNA–Protein interactions for RNA: ENSMUST00000170361.8

Pdlim5-205, Transcript of PDZ and LIM domain protein 5, mousemouse

TSL 5 BASIC

Gene Pdlim5, Length 2,010 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-205ENSMUST00000170361 Skida1Q80YR3 822 aa10.7□□□□□ -0.7
Pdlim5-205ENSMUST00000170361 Cep164Q5DU05 1446 aa10.7□□□□□ -0.7
Pdlim5-205ENSMUST00000170361 Spryd3E9Q9B3 442 aa10.69□□□□□ -0.7
Pdlim5-205ENSMUST00000170361 Rab11fip3Q8CHD8 1047 aa10.68□□□□□ -0.7
Pdlim5-205ENSMUST00000170361 Chmp4bQ9D8B3 224 aaKnown RBP10.68□□□□□ -0.7
Pdlim5-205ENSMUST00000170361 Rsf1E9PWW9 1441 aaKnown RBP10.68□□□□□ -0.7
Pdlim5-205ENSMUST00000170361 Lamc3Q9R0B6 1581 aa10.67□□□□□ -0.7
Pdlim5-205ENSMUST00000170361 Trap1aP19473 224 aa10.67□□□□□ -0.7
Pdlim5-205ENSMUST00000170361 E2f4Q8R0K9 410 aa10.67□□□□□ -0.7
Pdlim5-205ENSMUST00000170361 TnnQ80Z71 1560 aa10.64□□□□□ -0.71
Pdlim5-205ENSMUST00000170361 Kcng1A2BDX4 514 aa10.64□□□□□ -0.71
Pdlim5-205ENSMUST00000170361 MafgO54790 162 aa10.63□□□□□ -0.71
Pdlim5-205ENSMUST00000170361 NgefQ8CHT1 710 aa10.63□□□□□ -0.71
Pdlim5-205ENSMUST00000170361 Fmn1Q05860 1466 aa10.63□□□□□ -0.71
Pdlim5-205ENSMUST00000170361 Ccdc88bQ4QRL3 1481 aa10.62□□□□□ -0.71
Pdlim5-205ENSMUST00000170361 Mfap1aC0HKD8 439 aaKnown RBP10.6□□□□□ -0.71
Pdlim5-205ENSMUST00000170361 Mfap1bC0HKD9 439 aaKnown RBP10.6□□□□□ -0.71
Pdlim5-205ENSMUST00000170361 Csrnp3P59055 597 aa10.6□□□□□ -0.71
Pdlim5-205ENSMUST00000170361 Mrc2Q64449 1479 aa10.6□□□□□ -0.71
Pdlim5-205ENSMUST00000170361 Dnttip2Q8R2M2 758 aaKnown RBP10.6□□□□□ -0.71
Pdlim5-205ENSMUST00000170361 Zeb1Q64318 1117 aa10.57□□□□□ -0.72
Pdlim5-205ENSMUST00000170361 Fam43aQ8BUP8 424 aa10.57□□□□□ -0.72
Pdlim5-205ENSMUST00000170361 Sh3bp5Q9Z131 463 aa10.57□□□□□ -0.72
Pdlim5-205ENSMUST00000170361 Erich6D3Z6S9 713 aa10.56□□□□□ -0.72
Pdlim5-205ENSMUST00000170361 MccE9PWI3 1003 aa10.55□□□□□ -0.72
Pdlim5-205ENSMUST00000170361 Aebp2Q9Z248 504 aaKnown RBP10.55□□□□□ -0.72
Pdlim5-205ENSMUST00000170361 Ggt6Q6PDE7 497 aa10.55□□□□□ -0.72
Pdlim5-205ENSMUST00000170361 Ubl4bQ9CQ84 188 aa10.55□□□□□ -0.72
Pdlim5-205ENSMUST00000170361 Kif15Q6P9L6 1387 aa10.53□□□□□ -0.72
Pdlim5-205ENSMUST00000170361 Ccdc18Q640L5 1455 aa10.53□□□□□ -0.72
Pdlim5-205ENSMUST00000170361 Kdm4aQ8BW72 1064 aa10.52□□□□□ -0.73
Pdlim5-205ENSMUST00000170361 Dnajc5bQ9CQ94 199 aa10.51□□□□□ -0.73
Pdlim5-205ENSMUST00000170361 Cwc22Q8C5N3 908 aaKnown RBP10.5□□□□□ -0.73
Pdlim5-205ENSMUST00000170361 Mtmr7Q9Z2C9 660 aa10.5□□□□□ -0.73
Pdlim5-205ENSMUST00000170361 Rsph6aQ8CDR2 708 aa10.49□□□□□ -0.73
Pdlim5-205ENSMUST00000170361 Polr3glQ8R0C0 218 aa10.49□□□□□ -0.73
Pdlim5-205ENSMUST00000170361 Acin1Q9JIX8 1338 aaKnown RBP10.49□□□□□ -0.73
Pdlim5-205ENSMUST00000170361 CadpsQ80TJ1 1355 aa10.49□□□□□ -0.73
Pdlim5-205ENSMUST00000170361 Cux2P70298 1426 aa10.48□□□□□ -0.73
Pdlim5-205ENSMUST00000170361 Lmod3E9QA62 571 aa10.48□□□□□ -0.73
Pdlim5-205ENSMUST00000170361 1700122O11RikJ3QPW6 241 aa10.48□□□□□ -0.73
Pdlim5-205ENSMUST00000170361 NeflP08551 543 aa10.48□□□□□ -0.73
Pdlim5-205ENSMUST00000170361 Themis2Q91YX0 663 aa10.48□□□□□ -0.73
Pdlim5-205ENSMUST00000170361 DmtnQ9WV69 405 aa10.48□□□□□ -0.73
Pdlim5-205ENSMUST00000170361 Camsap1A2AHC3 1581 aa10.47□□□□□ -0.73
Pdlim5-205ENSMUST00000170361 TprnA2AI08 749 aaKnown RBP10.47□□□□□ -0.73
Pdlim5-205ENSMUST00000170361 Ssr1Q9CY50 286 aaKnown RBP10.47□□□□□ -0.73
Pdlim5-205ENSMUST00000170361 Atf5O70191 283 aa10.46□□□□□ -0.73
Pdlim5-205ENSMUST00000170361 Stra8P70278 393 aa10.46□□□□□ -0.74
Pdlim5-205ENSMUST00000170361 Ankrd13aQ80UP5 588 aa10.46□□□□□ -0.74
Pdlim5-205ENSMUST00000170361 Top2aQ01320 1528 aaKnown RBP10.45□□□□□ -0.74
Pdlim5-205ENSMUST00000170361 BcanQ61361 883 aa10.45□□□□□ -0.74
Pdlim5-205ENSMUST00000170361 Clstn1Q9EPL2 979 aa10.45□□□□□ -0.74
Pdlim5-205ENSMUST00000170361 Ccdc69Q3TCJ8 202 aa10.44□□□□□ -0.74
Pdlim5-205ENSMUST00000170361 Zc3h4Q6ZPZ3 1304 aaKnown RBP10.43□□□□□ -0.74
Pdlim5-205ENSMUST00000170361 Chrna2Q91X60 512 aa10.43□□□□□ -0.74
Pdlim5-205ENSMUST00000170361 C1qtnf12Q8R2Z0 308 aa10.43□□□□□ -0.74
Pdlim5-205ENSMUST00000170361 Plekhg3Q4VAC9 1341 aa10.42□□□□□ -0.74
Pdlim5-205ENSMUST00000170361 Kcnn1Q9EQR3 537 aa10.41□□□□□ -0.74
Pdlim5-205ENSMUST00000170361 Ppm1gQ61074 542 aa10.41□□□□□ -0.74
Pdlim5-205ENSMUST00000170361 Ppm1eQ80TL0 749 aa10.41□□□□□ -0.74
Pdlim5-205ENSMUST00000170361 CanxP35564 591 aaKnown RBP10.4□□□□□ -0.74
Pdlim5-205ENSMUST00000170361 Hoxd11P23813 323 aa10.4□□□□□ -0.75
Pdlim5-205ENSMUST00000170361 Myt1lP97500 1187 aa10.39□□□□□ -0.75
Pdlim5-205ENSMUST00000170361 Speer4f1Q9D5Q6 258 aa10.38□□□□□ -0.75
Pdlim5-205ENSMUST00000170361 Klhl34A2AI76 644 aa10.38□□□□□ -0.75
Pdlim5-205ENSMUST00000170361 Ipo8Q7TMY7 1010 aa10.38□□□□□ -0.75
Pdlim5-205ENSMUST00000170361 Kif21aQ9QXL2 1672 aa10.37□□□□□ -0.75
Pdlim5-205ENSMUST00000170361 Gtf2e1Q9D0D5 440 aa10.36□□□□□ -0.75
Pdlim5-205ENSMUST00000170361 LrpprcQ6PB66 1392 aaKnown RBP10.36□□□□□ -0.75
Pdlim5-205ENSMUST00000170361 NrkQ9R0G8 1455 aa10.36□□□□□ -0.75
Pdlim5-205ENSMUST00000170361 Zfyve27Q3TXX3 415 aa10.34□□□□□ -0.75
Pdlim5-205ENSMUST00000170361 Klf15Q9EPW2 415 aa10.34□□□□□ -0.75
Pdlim5-205ENSMUST00000170361 Grin2bQ01097 1482 aa10.34□□□□□ -0.75
Pdlim5-205ENSMUST00000170361 PogzQ8BZH4 1409 aaKnown RBP10.33□□□□□ -0.76
Pdlim5-205ENSMUST00000170361 Rapgef2Q8CHG7 1496 aa10.33□□□□□ -0.76
Pdlim5-205ENSMUST00000170361 Znf704Q9ERQ3 566 aa10.33□□□□□ -0.76
Pdlim5-205ENSMUST00000170361 Crocc2F6XLV1 1638 aa10.33□□□□□ -0.76
Pdlim5-205ENSMUST00000170361 Tmco4Q91WU4 631 aa10.32□□□□□ -0.76
Pdlim5-205ENSMUST00000170361 Efcab5A0JP43 1406 aa10.32□□□□□ -0.76
Pdlim5-205ENSMUST00000170361 Usp35M0QWN7 1009 aa10.31□□□□□ -0.76
Pdlim5-205ENSMUST00000170361 Dhx30Q99PU8 1217 aaKnown RBP10.31□□□□□ -0.76
Pdlim5-205ENSMUST00000170361 Speer4f2E9Q366 295 aa10.31□□□□□ -0.76
Pdlim5-205ENSMUST00000170361 Rbm27Q5SFM8 1060 aaKnown RBP10.31□□□□□ -0.76
Pdlim5-205ENSMUST00000170361 Il27Q8K3I6 234 aa10.31□□□□□ -0.76
Pdlim5-205ENSMUST00000170361 Zc3h15Q3TIV5 426 aaKnown RBP10.3□□□□□ -0.76
Pdlim5-205ENSMUST00000170361 Ccdc85aQ5SP85 500 aa10.3□□□□□ -0.76
Pdlim5-205ENSMUST00000170361 Armcx1Q9CX83 456 aa10.3□□□□□ -0.76
Pdlim5-205ENSMUST00000170361 Lrriq1Q0P5X1 1673 aa10.3□□□□□ -0.76
Pdlim5-205ENSMUST00000170361 Pbrm1Q8BSQ9 1634 aaKnown RBP10.3□□□□□ -0.76
Pdlim5-205ENSMUST00000170361 VaspP70460 375 aaKnown RBP10.29□□□□□ -0.76
Pdlim5-205ENSMUST00000170361 Pdcl3Q8BVF2 240 aa10.29□□□□□ -0.76
Pdlim5-205ENSMUST00000170361 Mybpc2Q5XKE0 1136 aa10.29□□□□□ -0.76
Pdlim5-205ENSMUST00000170361 Safb2Q80YR5 991 aaKnown RBP10.29□□□□□ -0.76
Pdlim5-205ENSMUST00000170361 Dhx29Q6PGC1 1365 aaKnown RBP10.29□□□□□ -0.76
Pdlim5-205ENSMUST00000170361 Mmp14P53690 582 aa10.28□□□□□ -0.76
Pdlim5-205ENSMUST00000170361 Dnajc2P54103 621 aaKnown RBP10.28□□□□□ -0.76
Pdlim5-205ENSMUST00000170361 Secisbp2lQ6A098 1086 aaKnown RBP10.28□□□□□ -0.76
Pdlim5-205ENSMUST00000170361 Gpatch8A2A6A1 1505 aa10.28□□□□□ -0.76
Pdlim5-205ENSMUST00000170361 Ppp4r2Q0VGB7 417 aa10.28□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 789.1 ms