RNA–Protein interactions for RNA: ENSMUST00000170361.8

Pdlim5-205, Transcript of PDZ and LIM domain protein 5, mousemouse

TSL 5 BASIC

Gene Pdlim5, Length 2,010 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-205ENSMUST00000170361 Ube2uB1AUC4 352 aa15.04■□□□□ -0
Pdlim5-205ENSMUST00000170361 DiexfQ8BTT6 772 aaKnown RBP14.62□□□□□ -0.07
Pdlim5-205ENSMUST00000170361 Chic1Q8CBW7 227 aa14.19□□□□□ -0.14
Pdlim5-205ENSMUST00000170361 CatipB9EKE5 520 aa14.12□□□□□ -0.15
Pdlim5-205ENSMUST00000170361 Ttbk1Q6PCN3 1308 aa14□□□□□ -0.17
Pdlim5-205ENSMUST00000170361 Gm35339A0A140LHH9 1649 aa13.75□□□□□ -0.21
Pdlim5-205ENSMUST00000170361 Rhox8Q6VSS7 320 aa13.63□□□□□ -0.23
Pdlim5-205ENSMUST00000170361 Ehmt2Q9Z148 1263 aaKnown RBP13.59□□□□□ -0.23
Pdlim5-205ENSMUST00000170361 ArxO35085 564 aa13.56□□□□□ -0.24
Pdlim5-205ENSMUST00000170361 Mapk8ip2Q9ERE9 830 aa13.54□□□□□ -0.24
Pdlim5-205ENSMUST00000170361 Plppr3Q7TPB0 716 aa13.52□□□□□ -0.24
Pdlim5-205ENSMUST00000170361 NischQ80TM9 1593 aa13.52□□□□□ -0.24
Pdlim5-205ENSMUST00000170361 Amer1Q7TS75 1132 aa13.31□□□□□ -0.28
Pdlim5-205ENSMUST00000170361 Abcc9P70170 1546 aa13.17□□□□□ -0.3
Pdlim5-205ENSMUST00000170361 Myt1Q8CFC2 1127 aa13.17□□□□□ -0.3
Pdlim5-205ENSMUST00000170361 Bcl11aQ9QYE3 773 aa13.05□□□□□ -0.32
Pdlim5-205ENSMUST00000170361 Aplp2Q06335 707 aa13.01□□□□□ -0.33
Pdlim5-205ENSMUST00000170361 Abcc8B2RUS7 1588 aa13□□□□□ -0.33
Pdlim5-205ENSMUST00000170361 Phf23Q8BSN5 401 aa12.95□□□□□ -0.34
Pdlim5-205ENSMUST00000170361 Kcna4Q61423 654 aa12.8□□□□□ -0.36
Pdlim5-205ENSMUST00000170361 Slc4a1apE9PX68 744 aa12.76□□□□□ -0.37
Pdlim5-205ENSMUST00000170361 Arid3aQ62431 601 aa12.74□□□□□ -0.37
Pdlim5-205ENSMUST00000170361 UbtfP25976 765 aaKnown RBP12.69□□□□□ -0.38
Pdlim5-205ENSMUST00000170361 Vsig10D3YX43 558 aa12.67□□□□□ -0.38
Pdlim5-205ENSMUST00000170361 Ncbp3Q8BZR9 615 aaKnown RBP12.67□□□□□ -0.38
Pdlim5-205ENSMUST00000170361 Ppargc1bQ8VHJ7 1014 aa12.66□□□□□ -0.38
Pdlim5-205ENSMUST00000170361 Gtf3c5Q8R2T8 520 aa12.64□□□□□ -0.39
Pdlim5-205ENSMUST00000170361 Q8BT18 775 aa12.63□□□□□ -0.39
Pdlim5-205ENSMUST00000170361 Taok2Q6ZQ29 1240 aa12.61□□□□□ -0.39
Pdlim5-205ENSMUST00000170361 BccipQ9CWI3 316 aa12.57□□□□□ -0.4
Pdlim5-205ENSMUST00000170361 Gab3Q8BSM5 595 aa12.56□□□□□ -0.4
Pdlim5-205ENSMUST00000170361 CenpbP27790 599 aa12.52□□□□□ -0.4
Pdlim5-205ENSMUST00000170361 Rsph4aQ8BYM7 716 aa12.51□□□□□ -0.41
Pdlim5-205ENSMUST00000170361 Prdm16A2A935 1275 aa12.5□□□□□ -0.41
Pdlim5-205ENSMUST00000170361 4930567H17RikQ3V0K5 233 aa12.5□□□□□ -0.41
Pdlim5-205ENSMUST00000170361 TimelessQ9R1X4 1197 aa12.44□□□□□ -0.42
Pdlim5-205ENSMUST00000170361 Pelp1Q9DBD5 1123 aaKnown RBP12.42□□□□□ -0.42
Pdlim5-205ENSMUST00000170361 Eif5bQ05D44 1216 aaKnown RBP12.34□□□□□ -0.43
Pdlim5-205ENSMUST00000170361 ScribQ80U72 1612 aa12.34□□□□□ -0.43
Pdlim5-205ENSMUST00000170361 Prdm10Q3UTQ7 1184 aa12.33□□□□□ -0.43
Pdlim5-205ENSMUST00000170361 Pcgf6Q99NA9 353 aa12.28□□□□□ -0.44
Pdlim5-205ENSMUST00000170361 Dcaf1Q80TR8 1506 aa12.25□□□□□ -0.45
Pdlim5-205ENSMUST00000170361 Fam71e1A1L3C1 212 aa12.25□□□□□ -0.45
Pdlim5-205ENSMUST00000170361 PrkcshO08795 521 aa12.25□□□□□ -0.45
Pdlim5-205ENSMUST00000170361 Cdk11bP24788 784 aaKnown RBP12.2□□□□□ -0.46
Pdlim5-205ENSMUST00000170361 Ripply1Q2WG77 201 aa12.18□□□□□ -0.46
Pdlim5-205ENSMUST00000170361 HrcG5E8J6 738 aa12.17□□□□□ -0.46
Pdlim5-205ENSMUST00000170361 Senp3Q9EP97 568 aaKnown RBP12.15□□□□□ -0.47
Pdlim5-205ENSMUST00000170361 NacadQ5SWP3 1504 aa12.1□□□□□ -0.47
Pdlim5-205ENSMUST00000170361 Pknox2Q8BG99 474 aa12.1□□□□□ -0.47
Pdlim5-205ENSMUST00000170361 Znf326O88291 580 aa12.09□□□□□ -0.47
Pdlim5-205ENSMUST00000170361 Ube2q2Q8K2Z8 378 aa12.09□□□□□ -0.47
Pdlim5-205ENSMUST00000170361 Znf316Q6PGE4 1016 aa12.08□□□□□ -0.48
Pdlim5-205ENSMUST00000170361 Npm2Q80W85 207 aa12.06□□□□□ -0.48
Pdlim5-205ENSMUST00000170361 Kdm5dQ62240 1548 aa12.02□□□□□ -0.49
Pdlim5-205ENSMUST00000170361 Rpgrip1Q9EPQ2 1331 aa12□□□□□ -0.49
Pdlim5-205ENSMUST00000170361 Ccdc180J3QNE4 1664 aa11.98□□□□□ -0.49
Pdlim5-205ENSMUST00000170361 Las1lA2BE28 776 aaKnown RBP11.98□□□□□ -0.49
Pdlim5-205ENSMUST00000170361 Os9Q8K2C7 672 aa11.97□□□□□ -0.49
Pdlim5-205ENSMUST00000170361 Scaf1Q5U4C3 1256 aaKnown RBP11.95□□□□□ -0.5
Pdlim5-205ENSMUST00000170361 Zbtb7cQ8VCZ7 619 aa11.91□□□□□ -0.5
Pdlim5-205ENSMUST00000170361 Fbxo3Q9DC63 480 aa11.88□□□□□ -0.51
Pdlim5-205ENSMUST00000170361 NrdcQ8BHG1 1161 aa11.87□□□□□ -0.51
Pdlim5-205ENSMUST00000170361 Ecm2Q5FW85 670 aa11.84□□□□□ -0.51
Pdlim5-205ENSMUST00000170361 NclP09405 707 aaKnown RBP11.82□□□□□ -0.52
Pdlim5-205ENSMUST00000170361 Rb1cc1Q9ESK9 1588 aa11.81□□□□□ -0.52
Pdlim5-205ENSMUST00000170361 Sycp2Q9CUU3 1500 aa11.8□□□□□ -0.52
Pdlim5-205ENSMUST00000170361 Fgd1P52734 960 aa11.78□□□□□ -0.52
Pdlim5-205ENSMUST00000170361 Gm38655A0A286YDK6 273 aa11.77□□□□□ -0.53
Pdlim5-205ENSMUST00000170361 Crybg2B7ZCC2 1516 aa11.76□□□□□ -0.53
Pdlim5-205ENSMUST00000170361 4933416C03RikQ3V063 378 aa11.74□□□□□ -0.53
Pdlim5-205ENSMUST00000170361 Baz1aO88379 1555 aa11.72□□□□□ -0.53
Pdlim5-205ENSMUST00000170361 Igsf3Q6ZQA6 1194 aa11.72□□□□□ -0.53
Pdlim5-205ENSMUST00000170361 Plcd4Q8K3R3 807 aa11.71□□□□□ -0.53
Pdlim5-205ENSMUST00000170361 Rtl1Q7M732 1744 aa11.7□□□□□ -0.54
Pdlim5-205ENSMUST00000170361 NefmP08553 848 aa11.68□□□□□ -0.54
Pdlim5-205ENSMUST00000170361 Samd1D3YXK1 519 aa11.67□□□□□ -0.54
Pdlim5-205ENSMUST00000170361 Irx6Q9ER75 438 aa11.66□□□□□ -0.54
Pdlim5-205ENSMUST00000170361 Ythdc1E9Q5K9 736 aaKnown RBP11.65□□□□□ -0.54
Pdlim5-205ENSMUST00000170361 Cnksr2Q80YA9 1032 aa11.63□□□□□ -0.55
Pdlim5-205ENSMUST00000170361 Arid4bA2CG63 1314 aaKnown RBP11.6□□□□□ -0.55
Pdlim5-205ENSMUST00000170361 Rangap1P46061 589 aaKnown RBP11.58□□□□□ -0.56
Pdlim5-205ENSMUST00000170361 Cers3Q1A3B0 383 aa11.57□□□□□ -0.56
Pdlim5-205ENSMUST00000170361 Gtf3c3Q3TMP1 882 aa11.56□□□□□ -0.56
Pdlim5-205ENSMUST00000170361 AcrbpQ3V140 540 aa11.55□□□□□ -0.56
Pdlim5-205ENSMUST00000170361 BicraF8VPZ9 1578 aa11.51□□□□□ -0.57
Pdlim5-205ENSMUST00000170361 Pde4cQ3UEI1 686 aa11.5□□□□□ -0.57
Pdlim5-205ENSMUST00000170361 Rtn4Q99P72 1162 aaKnown RBP11.5□□□□□ -0.57
Pdlim5-205ENSMUST00000170361 Skap1Q3UUV5 355 aa11.47□□□□□ -0.57
Pdlim5-205ENSMUST00000170361 Esf1Q3V1V3 845 aaKnown RBP11.43□□□□□ -0.58
Pdlim5-205ENSMUST00000170361 Tshz2Q68FE9 1030 aa11.43□□□□□ -0.58
Pdlim5-205ENSMUST00000170361 Smarca2Q6DIC0 1577 aa11.4□□□□□ -0.58
Pdlim5-205ENSMUST00000170361 Gpatch11Q3UFS4 262 aa11.4□□□□□ -0.59
Pdlim5-205ENSMUST00000170361 Anp32bQ9EST5 272 aaKnown RBP11.4□□□□□ -0.59
Pdlim5-205ENSMUST00000170361 Gm13697A2AK42 830 aa11.37□□□□□ -0.59
Pdlim5-205ENSMUST00000170361 HomezQ80W88 542 aa11.36□□□□□ -0.59
Pdlim5-205ENSMUST00000170361 Ciz1Q8VEH2 845 aa11.35□□□□□ -0.59
Pdlim5-205ENSMUST00000170361 Zcchc6Q5BLK4 1491 aaKnown RBP11.35□□□□□ -0.59
Pdlim5-205ENSMUST00000170361 Ccdc136Q3TVA9 1136 aa11.34□□□□□ -0.59
Pdlim5-205ENSMUST00000170361 Hsp90b1P08113 802 aaKnown RBP11.33□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 7.3 ms