RNA–Protein interactions for RNA: ENSMUST00000107935.7

Shank1-202, Transcript of SH3 and multiple ankyrin repeat domains protein 1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Shank1, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1-202ENSMUST00000107935 Sh3bp5Q9Z131 463 aa18.98■□□□□ 0.63
Shank1-202ENSMUST00000107935 IqubQ8CDK3 788 aa18.98■□□□□ 0.63
Shank1-202ENSMUST00000107935 Clstn1Q9EPL2 979 aa18.97■□□□□ 0.63
Shank1-202ENSMUST00000107935 Pdcl3Q8BVF2 240 aa18.96■□□□□ 0.63
Shank1-202ENSMUST00000107935 CgnP59242 1191 aa18.95■□□□□ 0.62
Shank1-202ENSMUST00000107935 Kdm2aP59997 1161 aa18.94■□□□□ 0.62
Shank1-202ENSMUST00000107935 Ubl4bQ9CQ84 188 aa18.94■□□□□ 0.62
Shank1-202ENSMUST00000107935 Cspp1B2RX88 1205 aa18.94■□□□□ 0.62
Shank1-202ENSMUST00000107935 Mre11Q61216 706 aa18.92■□□□□ 0.62
Shank1-202ENSMUST00000107935 Anapc15P60007 132 aa18.92■□□□□ 0.62
Shank1-202ENSMUST00000107935 Srpk2O54781 681 aaKnown RBP18.91■□□□□ 0.62
Shank1-202ENSMUST00000107935 Exosc9Q9JHI7 438 aaKnown RBP18.89■□□□□ 0.61
Shank1-202ENSMUST00000107935 Exoc6Q8R313 802 aa18.89■□□□□ 0.61
Shank1-202ENSMUST00000107935 Speer4f1Q9D5Q6 258 aa18.87■□□□□ 0.61
Shank1-202ENSMUST00000107935 Gm20521D3Z5F7 333 aa18.87■□□□□ 0.61
Shank1-202ENSMUST00000107935 Iqcf3Q9D498 203 aa18.87■□□□□ 0.61
Shank1-202ENSMUST00000107935 Smarce1O54941 411 aaKnown RBP18.86■□□□□ 0.61
Shank1-202ENSMUST00000107935 R3hcc1Q8BSI6 488 aa18.86■□□□□ 0.61
Shank1-202ENSMUST00000107935 1700019A02RikA0A087WPV9 146 aa18.86■□□□□ 0.61
Shank1-202ENSMUST00000107935 Ftsj3Q9DBE9 838 aaKnown RBP18.86■□□□□ 0.61
Shank1-202ENSMUST00000107935 Rsph3aQ3UFY4 516 aa18.84■□□□□ 0.61
Shank1-202ENSMUST00000107935 Taf3Q5HZG4 932 aa18.84■□□□□ 0.61
Shank1-202ENSMUST00000107935 Rassf8Q8CJ96 419 aa18.84■□□□□ 0.61
Shank1-202ENSMUST00000107935 Mroh3A0A1D5RM54 893 aa18.84■□□□□ 0.61
Shank1-202ENSMUST00000107935 Tomm22Q9CPQ3 142 aa18.83■□□□□ 0.6
Shank1-202ENSMUST00000107935 Tpm3-rs7D3Z2H9 248 aa18.82■□□□□ 0.6
Shank1-202ENSMUST00000107935 Iffo2Q8R2V2 512 aa18.82■□□□□ 0.6
Shank1-202ENSMUST00000107935 Cluap1Q8R3P7 413 aa18.8■□□□□ 0.6
Shank1-202ENSMUST00000107935 Tpm3P21107 285 aaKnown RBP18.8■□□□□ 0.6
Shank1-202ENSMUST00000107935 Mia2Q91ZV0 1396 aa18.8■□□□□ 0.6
Shank1-202ENSMUST00000107935 GorabQ8BRM2 368 aa18.79■□□□□ 0.6
Shank1-202ENSMUST00000107935 Fhad1A6PWD2 1420 aa18.79■□□□□ 0.6
Shank1-202ENSMUST00000107935 Rrp9Q91WM3 475 aaKnown RBP18.78■□□□□ 0.6
Shank1-202ENSMUST00000107935 Ccdc34Q3UI66 367 aa18.78■□□□□ 0.6
Shank1-202ENSMUST00000107935 Dusp9Q7TNL7 452 aa18.78■□□□□ 0.6
Shank1-202ENSMUST00000107935 Hspa5P20029 655 aaKnown RBP18.77■□□□□ 0.6
Shank1-202ENSMUST00000107935 Eea1Q8BL66 1411 aa18.77■□□□□ 0.6
Shank1-202ENSMUST00000107935 Tpm2P58774 284 aa18.76■□□□□ 0.59
Shank1-202ENSMUST00000107935 Sf3a1Q8K4Z5 791 aaKnown RBP18.76■□□□□ 0.59
Shank1-202ENSMUST00000107935 CrebrfQ8CDG5 640 aaKnown RBP18.75■□□□□ 0.59
Shank1-202ENSMUST00000107935 Sart3Q9JLI8 962 aaKnown RBP18.75■□□□□ 0.59
Shank1-202ENSMUST00000107935 Atp6v1dP57746 247 aa18.74■□□□□ 0.59
Shank1-202ENSMUST00000107935 Ylpm1Q9R0I7 1386 aaKnown RBP18.74■□□□□ 0.59
Shank1-202ENSMUST00000107935 Zscan21Q07231 555 aa18.73■□□□□ 0.59
Shank1-202ENSMUST00000107935 Stag3O70576 1240 aa18.73■□□□□ 0.59
Shank1-202ENSMUST00000107935 Pde3bQ61409 1100 aa18.73■□□□□ 0.59
Shank1-202ENSMUST00000107935 Znf771Q8BJ90 317 aa18.73■□□□□ 0.59
Shank1-202ENSMUST00000107935 BccipQ9CWI3 316 aa18.73■□□□□ 0.59
Shank1-202ENSMUST00000107935 Ipo4Q8VI75 1082 aa18.72■□□□□ 0.59
Shank1-202ENSMUST00000107935 Pnmal2G3X9N3 661 aa18.71■□□□□ 0.59
Shank1-202ENSMUST00000107935 CalrP14211 416 aaKnown RBP18.71■□□□□ 0.59
Shank1-202ENSMUST00000107935 Rb1cc1Q9ESK9 1588 aa18.7■□□□□ 0.58
Shank1-202ENSMUST00000107935 Fam13bQ8K2H3 851 aa18.7■□□□□ 0.58
Shank1-202ENSMUST00000107935 Cnga1P29974 684 aa18.69■□□□□ 0.58
Shank1-202ENSMUST00000107935 Samd1D3YXK1 519 aa18.69■□□□□ 0.58
Shank1-202ENSMUST00000107935 CntlnA2AM05 1397 aa18.68■□□□□ 0.58
Shank1-202ENSMUST00000107935 Glipr1l2Q9CQ35 332 aa18.68■□□□□ 0.58
Shank1-202ENSMUST00000107935 Ralbp1Q62172 648 aa18.68■□□□□ 0.58
Shank1-202ENSMUST00000107935 Anp32eP97822 260 aaKnown RBP18.68■□□□□ 0.58
Shank1-202ENSMUST00000107935 Drc7Q6V3W6 876 aa18.68■□□□□ 0.58
Shank1-202ENSMUST00000107935 Rundc1Q0VDN7 615 aa18.67■□□□□ 0.58
Shank1-202ENSMUST00000107935 Sin3aQ60520 1274 aaKnown RBP18.67■□□□□ 0.58
Shank1-202ENSMUST00000107935 Zfp777B9EKF4 885 aa18.66■□□□□ 0.58
Shank1-202ENSMUST00000107935 Zrsr2Q62377 462 aaKnown RBP18.66■□□□□ 0.58
Shank1-202ENSMUST00000107935 Abcc8B2RUS7 1588 aa18.66■□□□□ 0.58
Shank1-202ENSMUST00000107935 U2surpQ6NV83 1029 aaKnown RBP18.66■□□□□ 0.58
Shank1-202ENSMUST00000107935 MecomP14404 1042 aa18.65■□□□□ 0.58
Shank1-202ENSMUST00000107935 Utp3Q9JI13 469 aaKnown RBP18.65■□□□□ 0.58
Shank1-202ENSMUST00000107935 Znf330Q922H9 316 aa18.65■□□□□ 0.58
Shank1-202ENSMUST00000107935 Casq1O09165 405 aa18.65■□□□□ 0.58
Shank1-202ENSMUST00000107935 Cwc15Q9JHS9 229 aaKnown RBP18.65■□□□□ 0.58
Shank1-202ENSMUST00000107935 Tpd52l1O54818 204 aa18.64■□□□□ 0.57
Shank1-202ENSMUST00000107935 Tmco5bQ80X59 307 aa18.64■□□□□ 0.57
Shank1-202ENSMUST00000107935 Mical1Q8VDP3 1048 aa18.64■□□□□ 0.57
Shank1-202ENSMUST00000107935 Tmf1B9EKI3 1091 aa18.64■□□□□ 0.57
Shank1-202ENSMUST00000107935 Golga2Q921M4 999 aa18.63■□□□□ 0.57
Shank1-202ENSMUST00000107935 Mrvi1Q9WUX5 899 aaKnown RBP18.63■□□□□ 0.57
Shank1-202ENSMUST00000107935 Mtus2Q3UHD3 1353 aa18.63■□□□□ 0.57
Shank1-202ENSMUST00000107935 Fam43aQ8BUP8 424 aa18.62■□□□□ 0.57
Shank1-202ENSMUST00000107935 Ccer1Q9CQL2 403 aa18.62■□□□□ 0.57
Shank1-202ENSMUST00000107935 Kif4P33174 1231 aa18.62■□□□□ 0.57
Shank1-202ENSMUST00000107935 Rbm10Q99KG3 930 aaKnown RBP18.62■□□□□ 0.57
Shank1-202ENSMUST00000107935 St18Q80TY4 1045 aa18.61■□□□□ 0.57
Shank1-202ENSMUST00000107935 CrbnQ8C7D2 445 aa18.61■□□□□ 0.57
Shank1-202ENSMUST00000107935 Gripap1Q8VD04 806 aa18.6■□□□□ 0.57
Shank1-202ENSMUST00000107935 Gtf2a1Q99PM3 378 aa18.6■□□□□ 0.57
Shank1-202ENSMUST00000107935 Arid4aF8VPQ2 1261 aaKnown RBP18.58■□□□□ 0.57
Shank1-202ENSMUST00000107935 Kif3aP28741 701 aa18.58■□□□□ 0.56
Shank1-202ENSMUST00000107935 Nap1l3Q794H2 544 aa18.58■□□□□ 0.56
Shank1-202ENSMUST00000107935 Rtf1A2AQ19 715 aaKnown RBP18.57■□□□□ 0.56
Shank1-202ENSMUST00000107935 Dixdc1Q80Y83 711 aa18.57■□□□□ 0.56
Shank1-202ENSMUST00000107935 Stk24Q99KH8 431 aa18.57■□□□□ 0.56
Shank1-202ENSMUST00000107935 Znhit6Q3UFB2 460 aaKnown RBP18.57■□□□□ 0.56
Shank1-202ENSMUST00000107935 Tpm1P58771 284 aa18.56■□□□□ 0.56
Shank1-202ENSMUST00000107935 Ccdc173A0JLY1 547 aa18.56■□□□□ 0.56
Shank1-202ENSMUST00000107935 Eif2s2Q99L45 331 aaKnown RBP18.56■□□□□ 0.56
Shank1-202ENSMUST00000107935 Rfx1P48377 963 aa18.55■□□□□ 0.56
Shank1-202ENSMUST00000107935 TimelessQ9R1X4 1197 aa18.55■□□□□ 0.56
Shank1-202ENSMUST00000107935 NgefQ8CHT1 710 aa18.55■□□□□ 0.56
Shank1-202ENSMUST00000107935 Golga3P55937 1487 aa18.54■□□□□ 0.56
Retrieved 100 of 22,080 RNA–protein pairs in 10.1 ms