RNA–Protein interactions for RNA: ENSMUST00000055226.12

Fn1-201, Transcript of Fibronectin, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Fn1, Length 8,315 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Fn1-201ENSMUST00000055226 BccipQ9CWI3 316 aa15.42■□□□□ 0.06
Fn1-201ENSMUST00000055226 Plin1Q8CGN5 517 aa15.41■□□□□ 0.06
Fn1-201ENSMUST00000055226 Q3TQI7 289 aaKnown RBP15.41■□□□□ 0.06
Fn1-201ENSMUST00000055226 Cwc22Q8C5N3 908 aaKnown RBP15.41■□□□□ 0.06
Fn1-201ENSMUST00000055226 Ccdc47Q9D024 483 aaKnown RBP15.41■□□□□ 0.06
Fn1-201ENSMUST00000055226 Txndc2Q6P902 515 aa15.4■□□□□ 0.06
Fn1-201ENSMUST00000055226 R3hcc1Q8BSI6 488 aa15.4■□□□□ 0.06
Fn1-201ENSMUST00000055226 Tnnt1O88346 262 aa15.4■□□□□ 0.06
Fn1-201ENSMUST00000055226 Tpm4Q6IRU2 248 aa15.39■□□□□ 0.05
Fn1-201ENSMUST00000055226 Ddx11Q6AXC6 880 aa15.39■□□□□ 0.05
Fn1-201ENSMUST00000055226 Kif15Q6P9L6 1387 aa15.39■□□□□ 0.05
Fn1-201ENSMUST00000055226 Pak3Q61036 559 aa15.38■□□□□ 0.05
Fn1-201ENSMUST00000055226 Rsf1E9PWW9 1441 aaKnown RBP15.38■□□□□ 0.05
Fn1-201ENSMUST00000055226 Cep164Q5DU05 1446 aa15.38■□□□□ 0.05
Fn1-201ENSMUST00000055226 PtmsQ9D0J8 101 aaKnown RBP15.37■□□□□ 0.05
Fn1-201ENSMUST00000055226 Cald1E9QA15 768 aaKnown RBP15.36■□□□□ 0.05
Fn1-201ENSMUST00000055226 Stk26Q99JT2 416 aa15.36■□□□□ 0.05
Fn1-201ENSMUST00000055226 Ecm2Q5FW85 670 aa15.36■□□□□ 0.05
Fn1-201ENSMUST00000055226 Tpd52l1O54818 204 aa15.35■□□□□ 0.05
Fn1-201ENSMUST00000055226 Ppm1gQ61074 542 aa15.35■□□□□ 0.05
Fn1-201ENSMUST00000055226 Ccar1Q8CH18 1146 aaKnown RBP15.35■□□□□ 0.05
Fn1-201ENSMUST00000055226 Ftsj3Q9DBE9 838 aaKnown RBP15.34■□□□□ 0.05
Fn1-201ENSMUST00000055226 Fhad1A6PWD2 1420 aa15.33■□□□□ 0.05
Fn1-201ENSMUST00000055226 Bcl11bQ99PV8 884 aa15.33■□□□□ 0.04
Fn1-201ENSMUST00000055226 Tpm3P21107 285 aaKnown RBP15.31■□□□□ 0.04
Fn1-201ENSMUST00000055226 Tpm2P58774 284 aa15.31■□□□□ 0.04
Fn1-201ENSMUST00000055226 CgnP59242 1191 aa15.31■□□□□ 0.04
Fn1-201ENSMUST00000055226 Ap3b2Q9JME5 1082 aa15.3■□□□□ 0.04
Fn1-201ENSMUST00000055226 AknaQ80VW7 1404 aa15.29■□□□□ 0.04
Fn1-201ENSMUST00000055226 Mical1Q8VDP3 1048 aa15.28■□□□□ 0.04
Fn1-201ENSMUST00000055226 Erich6bQ9D4S6 220 aa15.28■□□□□ 0.04
Fn1-201ENSMUST00000055226 AU015836B2RUM3 263 aa15.28■□□□□ 0.04
Fn1-201ENSMUST00000055226 Ccdc43Q9CR29 222 aaKnown RBP15.28■□□□□ 0.04
Fn1-201ENSMUST00000055226 Gm21969J3QJZ1 289 aa15.27■□□□□ 0.03
Fn1-201ENSMUST00000055226 Birc3O08863 600 aa15.26■□□□□ 0.03
Fn1-201ENSMUST00000055226 Smarce1O54941 411 aaKnown RBP15.26■□□□□ 0.03
Fn1-201ENSMUST00000055226 Krt82Q99M74 516 aa15.26■□□□□ 0.03
Fn1-201ENSMUST00000055226 Rsph4aQ8BYM7 716 aa15.26■□□□□ 0.03
Fn1-201ENSMUST00000055226 Brpf1B2RRD7 1212 aa15.25■□□□□ 0.03
Fn1-201ENSMUST00000055226 Dhx16G3X8X0 1044 aaKnown RBP15.25■□□□□ 0.03
Fn1-201ENSMUST00000055226 Dbr1Q923B1 550 aa15.24■□□□□ 0.03
Fn1-201ENSMUST00000055226 Arid3cA6PWV5 409 aa15.23■□□□□ 0.03
Fn1-201ENSMUST00000055226 Hs1bp3Q3TC93 395 aa15.23■□□□□ 0.03
Fn1-201ENSMUST00000055226 Map7d2A2AG50 781 aa15.23■□□□□ 0.03
Fn1-201ENSMUST00000055226 Fbln2P37889 1221 aa15.22■□□□□ 0.03
Fn1-201ENSMUST00000055226 Kcnn1Q9EQR3 537 aa15.22■□□□□ 0.03
Fn1-201ENSMUST00000055226 Mbd3Q9Z2D8 285 aaKnown RBP15.22■□□□□ 0.03
Fn1-201ENSMUST00000055226 RdxP26043 583 aaKnown RBP15.21■□□□□ 0.03
Fn1-201ENSMUST00000055226 Ncbp3Q8BZR9 615 aaKnown RBP15.21■□□□□ 0.03
Fn1-201ENSMUST00000055226 CrebrfQ8CDG5 640 aaKnown RBP15.21■□□□□ 0.03
Fn1-201ENSMUST00000055226 Ccer1Q9CQL2 403 aa15.21■□□□□ 0.03
Fn1-201ENSMUST00000055226 Sf3b2Q3UJB0 878 aaKnown RBP15.21■□□□□ 0.02
Fn1-201ENSMUST00000055226 Tnnt2P50752 301 aa15.2■□□□□ 0.02
Fn1-201ENSMUST00000055226 Tmco5bQ80X59 307 aa15.2■□□□□ 0.02
Fn1-201ENSMUST00000055226 Gtf2e1Q9D0D5 440 aa15.19■□□□□ 0.02
Fn1-201ENSMUST00000055226 Lemd3Q9WU40 921 aa15.19■□□□□ 0.02
Fn1-201ENSMUST00000055226 Spryd3E9Q9B3 442 aa15.19■□□□□ 0.02
Fn1-201ENSMUST00000055226 Rwdd1Q9CQK7 243 aa15.19■□□□□ 0.02
Fn1-201ENSMUST00000055226 Smc4Q8CG47 1286 aa15.18■□□□□ 0.02
Fn1-201ENSMUST00000055226 Tpm1P58771 284 aa15.18■□□□□ 0.02
Fn1-201ENSMUST00000055226 Anks4bQ8K3X6 423 aa15.17■□□□□ 0.02
Fn1-201ENSMUST00000055226 Eea1Q8BL66 1411 aa15.17■□□□□ 0.02
Fn1-201ENSMUST00000055226 MsnP26041 577 aaKnown RBP15.16■□□□□ 0.02
Fn1-201ENSMUST00000055226 Tmf1B9EKI3 1091 aa15.16■□□□□ 0.02
Fn1-201ENSMUST00000055226 Ppp4r3bQ922R5 820 aa15.14■□□□□ 0.01
Fn1-201ENSMUST00000055226 UvssaQ9D479 717 aa15.14■□□□□ 0.01
Fn1-201ENSMUST00000055226 AppP12023 770 aa15.14■□□□□ 0.01
Fn1-201ENSMUST00000055226 U2af1Q9D883 239 aaKnown RBP15.14■□□□□ 0.01
Fn1-201ENSMUST00000055226 B4galnt3Q6L8S8 986 aa15.12■□□□□ 0.01
Fn1-201ENSMUST00000055226 Egfem1Q8C088 590 aa15.12■□□□□ 0.01
Fn1-201ENSMUST00000055226 Arid4aF8VPQ2 1261 aaKnown RBP15.12■□□□□ 0.01
Fn1-201ENSMUST00000055226 AcrbpQ3V140 540 aa15.12■□□□□ 0.01
Fn1-201ENSMUST00000055226 Evc2Q8K1G2 1220 aa15.11■□□□□ 0.01
Fn1-201ENSMUST00000055226 Sall2Q9QX96 1004 aa15.1■□□□□ 0.01
Fn1-201ENSMUST00000055226 Ccp110Q7TSH4 1004 aa15.09■□□□□ 0.01
Fn1-201ENSMUST00000055226 A0A1L1SQF0 893 aa15.09■□□□□ 0.01
Fn1-201ENSMUST00000055226 Eva1cP58659 440 aa15.09■□□□□ 0.01
Fn1-201ENSMUST00000055226 Ripply1Q2WG77 201 aa15.09■□□□□ 0.01
Fn1-201ENSMUST00000055226 Mia2Q91ZV0 1396 aa15.08■□□□□ 0.01
Fn1-201ENSMUST00000055226 Slc4a10Q5DTL9 1118 aa15.08■□□□□ 0
Fn1-201ENSMUST00000055226 Rab11fip3Q8CHD8 1047 aa15.08■□□□□ 0
Fn1-201ENSMUST00000055226 Ifit1bl1D3Z6F0 470 aa15.08■□□□□ 0
Fn1-201ENSMUST00000055226 March6Q6ZQ89 909 aa15.08■□□□□ 0
Fn1-201ENSMUST00000055226 Ipo7Q9EPL8 1038 aaKnown RBP15.07■□□□□ 0
Fn1-201ENSMUST00000055226 Becn1O88597 448 aa15.07■□□□□ 0
Fn1-201ENSMUST00000055226 Pibf1E9Q6K3 756 aa15.07■□□□□ 0
Fn1-201ENSMUST00000055226 Gabpb2P81069 414 aa15.06■□□□□ 0
Fn1-201ENSMUST00000055226 Cplx2P84086 134 aa15.06■□□□□ 0
Fn1-201ENSMUST00000055226 Map4P27546 1125 aaKnown RBP15.06■□□□□ 0
Fn1-201ENSMUST00000055226 Chmp7Q8R1T1 451 aa15.06■□□□□ 0
Fn1-201ENSMUST00000055226 Speer4f1Q9D5Q6 258 aa15.06■□□□□ 0
Fn1-201ENSMUST00000055226 Nap1l2P51860 460 aa15.05■□□□□ -0
Fn1-201ENSMUST00000055226 Atp6v1dP57746 247 aa15.04■□□□□ -0
Fn1-201ENSMUST00000055226 Znf710Q3U288 666 aa15.04■□□□□ -0
Fn1-201ENSMUST00000055226 Cetn4Q8K4K1 168 aa15.04■□□□□ -0
Fn1-201ENSMUST00000055226 Srek1Q8BZX4 494 aaKnown RBP15.04■□□□□ -0
Fn1-201ENSMUST00000055226 Ccdc27Q3V036 639 aa15.03■□□□□ -0
Fn1-201ENSMUST00000055226 Cabp4Q8VHC5 271 aa15.03■□□□□ -0
Fn1-201ENSMUST00000055226 Hap1O35668 628 aa15.03■□□□□ -0
Fn1-201ENSMUST00000055226 Fam193aQ8CGI1 1231 aaKnown RBP15.02■□□□□ -0
Retrieved 100 of 22,080 RNA–protein pairs in 65.2 ms