RNA–Protein interactions for RNA: ENSMUST00000055226.12

Fn1-201, Transcript of Fibronectin, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Fn1, Length 8,315 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Fn1-201ENSMUST00000055226 Rhox8Q6VSS7 320 aa21.32■■□□□ 1
Fn1-201ENSMUST00000055226 Ube2uB1AUC4 352 aa19.47■□□□□ 0.71
Fn1-201ENSMUST00000055226 Pelp1Q9DBD5 1123 aaKnown RBP19.43■□□□□ 0.7
Fn1-201ENSMUST00000055226 Cngb1E1AZ71 1325 aa19.36■□□□□ 0.69
Fn1-201ENSMUST00000055226 Rpgrip1Q9EPQ2 1331 aa19.2■□□□□ 0.66
Fn1-201ENSMUST00000055226 Esf1Q3V1V3 845 aaKnown RBP19.2■□□□□ 0.66
Fn1-201ENSMUST00000055226 Zeb1Q64318 1117 aa19.17■□□□□ 0.66
Fn1-201ENSMUST00000055226 Las1lA2BE28 776 aaKnown RBP19.04■□□□□ 0.64
Fn1-201ENSMUST00000055226 Wdr66E9Q743 1299 aa18.93■□□□□ 0.62
Fn1-201ENSMUST00000055226 Npm2Q80W85 207 aa18.83■□□□□ 0.6
Fn1-201ENSMUST00000055226 Ehmt2Q9Z148 1263 aaKnown RBP18.77■□□□□ 0.6
Fn1-201ENSMUST00000055226 Ccdc136Q3TVA9 1136 aa18.55■□□□□ 0.56
Fn1-201ENSMUST00000055226 Amer1Q7TS75 1132 aa18.53■□□□□ 0.56
Fn1-201ENSMUST00000055226 Myt1lP97500 1187 aa18.46■□□□□ 0.55
Fn1-201ENSMUST00000055226 Gab3Q8BSM5 595 aa18.38■□□□□ 0.53
Fn1-201ENSMUST00000055226 4930567H17RikQ3V0K5 233 aa18.3■□□□□ 0.52
Fn1-201ENSMUST00000055226 Trim41Q5NCC3 630 aa18.25■□□□□ 0.51
Fn1-201ENSMUST00000055226 Stra8P70278 393 aa18.13■□□□□ 0.49
Fn1-201ENSMUST00000055226 Slc24a1Q91WD8 1130 aa18.06■□□□□ 0.48
Fn1-201ENSMUST00000055226 Os9Q8K2C7 672 aa18■□□□□ 0.47
Fn1-201ENSMUST00000055226 Anp32bQ9EST5 272 aaKnown RBP17.91■□□□□ 0.46
Fn1-201ENSMUST00000055226 Il27Q8K3I6 234 aa17.77■□□□□ 0.43
Fn1-201ENSMUST00000055226 UbtfP25976 765 aaKnown RBP17.77■□□□□ 0.43
Fn1-201ENSMUST00000055226 NeflP08551 543 aa17.76■□□□□ 0.43
Fn1-201ENSMUST00000055226 CenpbP27790 599 aa17.74■□□□□ 0.43
Fn1-201ENSMUST00000055226 Gm13697A2AK42 830 aa17.7■□□□□ 0.42
Fn1-201ENSMUST00000055226 NrdcQ8BHG1 1161 aa17.66■□□□□ 0.42
Fn1-201ENSMUST00000055226 HrcG5E8J6 738 aa17.65■□□□□ 0.42
Fn1-201ENSMUST00000055226 4933416C03RikQ3V063 378 aa17.6■□□□□ 0.41
Fn1-201ENSMUST00000055226 Neurod1Q60867 357 aa17.59■□□□□ 0.41
Fn1-201ENSMUST00000055226 Ttbk1Q6PCN3 1308 aa17.57■□□□□ 0.4
Fn1-201ENSMUST00000055226 NclP09405 707 aaKnown RBP17.53■□□□□ 0.4
Fn1-201ENSMUST00000055226 DiexfQ8BTT6 772 aaKnown RBP17.52■□□□□ 0.4
Fn1-201ENSMUST00000055226 NefmP08553 848 aa17.5■□□□□ 0.39
Fn1-201ENSMUST00000055226 Fam50aQ9WV03 339 aaKnown RBP17.49■□□□□ 0.39
Fn1-201ENSMUST00000055226 Ap3b1Q9Z1T1 1105 aa17.38■□□□□ 0.37
Fn1-201ENSMUST00000055226 Chic1Q8CBW7 227 aa17.35■□□□□ 0.37
Fn1-201ENSMUST00000055226 Gm13695A2AK44 830 aa17.33■□□□□ 0.36
Fn1-201ENSMUST00000055226 Eif5bQ05D44 1216 aaKnown RBP17.33■□□□□ 0.36
Fn1-201ENSMUST00000055226 Atp1b4Q99ME6 356 aa17.32■□□□□ 0.36
Fn1-201ENSMUST00000055226 Cdk11bP24788 784 aaKnown RBP17.3■□□□□ 0.36
Fn1-201ENSMUST00000055226 Zbtb7cQ8VCZ7 619 aa17.26■□□□□ 0.35
Fn1-201ENSMUST00000055226 Rtl1Q7M732 1744 aa17.26■□□□□ 0.35
Fn1-201ENSMUST00000055226 Ifnlr1Q8CGK5 535 aa17.25■□□□□ 0.35
Fn1-201ENSMUST00000055226 Hnrnpul2Q00PI9 745 aaKnown RBP17.24■□□□□ 0.35
Fn1-201ENSMUST00000055226 Plppr3Q7TPB0 716 aa17.24■□□□□ 0.35
Fn1-201ENSMUST00000055226 Acin1Q9JIX8 1338 aaKnown RBP17.18■□□□□ 0.34
Fn1-201ENSMUST00000055226 NischQ80TM9 1593 aa17.17■□□□□ 0.34
Fn1-201ENSMUST00000055226 Tnnt3Q9QZ47 272 aa17.11■□□□□ 0.33
Fn1-201ENSMUST00000055226 Ccdc180J3QNE4 1664 aa17.11■□□□□ 0.33
Fn1-201ENSMUST00000055226 Erich6D3Z6S9 713 aa17.08■□□□□ 0.33
Fn1-201ENSMUST00000055226 Nlrp6Q91WS2 869 aa17.06■□□□□ 0.32
Fn1-201ENSMUST00000055226 Hdac5Q9Z2V6 1113 aa17■□□□□ 0.31
Fn1-201ENSMUST00000055226 Npm1Q61937 292 aaKnown RBP16.97■□□□□ 0.31
Fn1-201ENSMUST00000055226 Polr3glQ8R0C0 218 aa16.92■□□□□ 0.3
Fn1-201ENSMUST00000055226 Safb2Q80YR5 991 aaKnown RBP16.91■□□□□ 0.3
Fn1-201ENSMUST00000055226 Gm35339A0A140LHH9 1649 aa16.91■□□□□ 0.3
Fn1-201ENSMUST00000055226 Prdm10Q3UTQ7 1184 aa16.85■□□□□ 0.29
Fn1-201ENSMUST00000055226 Zcchc6Q5BLK4 1491 aaKnown RBP16.85■□□□□ 0.29
Fn1-201ENSMUST00000055226 Hsp90aa1P07901 733 aaKnown RBP16.84■□□□□ 0.29
Fn1-201ENSMUST00000055226 Zbtb4Q5F293 982 aa16.83■□□□□ 0.28
Fn1-201ENSMUST00000055226 CatipB9EKE5 520 aa16.82■□□□□ 0.28
Fn1-201ENSMUST00000055226 Znf326O88291 580 aa16.79■□□□□ 0.28
Fn1-201ENSMUST00000055226 TonslQ6NZL6 1363 aa16.76■□□□□ 0.27
Fn1-201ENSMUST00000055226 Abcc9P70170 1546 aa16.76■□□□□ 0.27
Fn1-201ENSMUST00000055226 Nop58Q6DFW4 536 aaKnown RBP16.76■□□□□ 0.27
Fn1-201ENSMUST00000055226 Rtl5Q5DTT4 599 aa16.7■□□□□ 0.26
Fn1-201ENSMUST00000055226 Lmod2Q3UHZ5 550 aa16.68■□□□□ 0.26
Fn1-201ENSMUST00000055226 Fkbp15Q6P9Q6 1216 aaKnown RBP16.65■□□□□ 0.26
Fn1-201ENSMUST00000055226 DaxxO35613 739 aa16.62■□□□□ 0.25
Fn1-201ENSMUST00000055226 Myt1Q8CFC2 1127 aa16.6■□□□□ 0.25
Fn1-201ENSMUST00000055226 Ppargc1bQ8VHJ7 1014 aa16.59■□□□□ 0.25
Fn1-201ENSMUST00000055226 ArxO35085 564 aa16.58■□□□□ 0.24
Fn1-201ENSMUST00000055226 Upf2A2AT37 1269 aaKnown RBP16.56■□□□□ 0.24
Fn1-201ENSMUST00000055226 Rangap1P46061 589 aaKnown RBP16.54■□□□□ 0.24
Fn1-201ENSMUST00000055226 P3h3Q8CG70 732 aa16.52■□□□□ 0.24
Fn1-201ENSMUST00000055226 Fgd1P52734 960 aa16.45■□□□□ 0.22
Fn1-201ENSMUST00000055226 Plekhg3Q4VAC9 1341 aa16.34■□□□□ 0.21
Fn1-201ENSMUST00000055226 Ythdc1E9Q5K9 736 aaKnown RBP16.33■□□□□ 0.2
Fn1-201ENSMUST00000055226 MyclP10166 368 aa16.31■□□□□ 0.2
Fn1-201ENSMUST00000055226 Irx6Q9ER75 438 aa16.3■□□□□ 0.2
Fn1-201ENSMUST00000055226 Clstn1Q9EPL2 979 aa16.25■□□□□ 0.19
Fn1-201ENSMUST00000055226 Lmod3E9QA62 571 aa16.24■□□□□ 0.19
Fn1-201ENSMUST00000055226 Anp32aO35381 247 aa16.24■□□□□ 0.19
Fn1-201ENSMUST00000055226 DekQ7TNV0 380 aaKnown RBP16.24■□□□□ 0.19
Fn1-201ENSMUST00000055226 Clstn2Q9ER65 966 aa16.21■□□□□ 0.18
Fn1-201ENSMUST00000055226 Rtn4Q99P72 1162 aaKnown RBP16.2■□□□□ 0.18
Fn1-201ENSMUST00000055226 PnnO35691 725 aaKnown RBP16.19■□□□□ 0.18
Fn1-201ENSMUST00000055226 Ubl4bQ9CQ84 188 aa16.17■□□□□ 0.18
Fn1-201ENSMUST00000055226 Ggt6Q6PDE7 497 aa16.15■□□□□ 0.18
Fn1-201ENSMUST00000055226 Csrnp3P59055 597 aa16.14■□□□□ 0.17
Fn1-201ENSMUST00000055226 Mier1Q5UAK0 511 aa16.13■□□□□ 0.17
Fn1-201ENSMUST00000055226 IqubQ8CDK3 788 aa16.13■□□□□ 0.17
Fn1-201ENSMUST00000055226 Vsig10D3YX43 558 aa16.12■□□□□ 0.17
Fn1-201ENSMUST00000055226 Rad21Q61550 635 aaKnown RBP16.11■□□□□ 0.17
Fn1-201ENSMUST00000055226 Eif4g2Q62448 906 aaKnown RBP16.1■□□□□ 0.17
Fn1-201ENSMUST00000055226 Trim26Q99PN3 545 aa16.09■□□□□ 0.17
Fn1-201ENSMUST00000055226 Pcgf6Q99NA9 353 aa16.08■□□□□ 0.17
Fn1-201ENSMUST00000055226 Slc4a1apE9PX68 744 aa16.07■□□□□ 0.16
Fn1-201ENSMUST00000055226 ClspnQ80YR7 1315 aa16.06■□□□□ 0.16
Retrieved 100 of 22,080 RNA–protein pairs in 52.7 ms