RNA–Protein interactions for RNA: snR50

snR50, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR50, Length 90 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR50snR50 RPS10BP46784 105 aaKnown RBP0.01□□□□□ -2.41
snR50snR50 DPB11P47027 764 aaPredicted RBP0.01□□□□□ -2.41
snR50snR50 BIO3P50277 480 aa0.01□□□□□ -2.41
snR50snR50 ERG26P53199 349 aaKnown RBP0.01□□□□□ -2.41
snR50snR50 ART5P53244 586 aaKnown RBP0.01□□□□□ -2.41
snR50snR50 OGG1P53397 376 aaPredicted RBP0.01□□□□□ -2.41
snR50snR50 TPS1Q00764 495 aaKnown RBP0.01□□□□□ -2.41
snR50snR50 MRPS16Q02608 121 aa0.01□□□□□ -2.41
snR50snR50 YMR102CQ03177 834 aa0.01□□□□□ -2.41
snR50snR50 PDS5Q04264 1277 aa0.01□□□□□ -2.41
snR50snR50 EMI2Q04409 500 aaKnown RBP0.01□□□□□ -2.41
snR50snR50 SUC2P00724 532 aa0□□□□□ -2.41
snR50snR50 ADH3P07246 375 aaKnown RBP0□□□□□ -2.41
snR50snR50 MIS1P09440 975 aaKnown RBP0□□□□□ -2.41
snR50snR50 SCH9P11792 824 aaKnown RBP0□□□□□ -2.41
snR50snR50 YEF3P16521 1044 aaKnown RBP0□□□□□ -2.41
snR50snR50 CDC15P27636 974 aa0□□□□□ -2.41
snR50snR50 POP5P28005 173 aa0□□□□□ -2.41
snR50snR50 NDI1P32340 513 aa0□□□□□ -2.41
snR50snR50 KAR9P32526 644 aa0□□□□□ -2.41
snR50snR50 ZUO1P32527 433 aaKnown RBP0□□□□□ -2.41
snR50snR50 GLC7P32598 312 aaKnown RBP0□□□□□ -2.41
snR50snR50 YKL023WP36103 277 aaKnown RBP0□□□□□ -2.41
snR50snR50 HEL1P36113 551 aa0□□□□□ -2.41
snR50snR50 DIA4P38705 446 aaPredicted RBP0□□□□□ -2.41
snR50snR50 DBP8P38719 431 aa0□□□□□ -2.41
snR50snR50 FSH1P38777 243 aaKnown RBP0□□□□□ -2.41
snR50snR50 ANS1P38832 159 aa0□□□□□ -2.41
snR50snR50 FRT2P39734 528 aa0□□□□□ -2.41
snR50snR50 SAW1P39735 261 aa0□□□□□ -2.41
snR50snR50 MIG3P39943 394 aa0□□□□□ -2.41
snR50snR50 AVT4P50944 713 aa0□□□□□ -2.41
snR50snR50 YPS5P53057 165 aa0□□□□□ -2.41
snR50snR50 PCP1P53259 346 aa0□□□□□ -2.41
snR50snR50 SHR3Q02774 210 aa0□□□□□ -2.41
snR50snR50 IVY1Q04934 453 aa0□□□□□ -2.41
snR50snR50 EIS1Q05050 843 aaKnown RBP0□□□□□ -2.41
snR50snR50 NDE2Q07500 545 aa0□□□□□ -2.41
snR50snR50 RPS10AQ08745 105 aaPredicted RBP0□□□□□ -2.41
snR50snR50 RKM5Q12367 367 aa0□□□□□ -2.41
snR50snR50 BUD5P25300 642 aaPredicted RBP-0.01□□□□□ -2.41
snR50snR50 PFF1P38244 976 aa-0.01□□□□□ -2.41
snR50snR50 STT3P39007 718 aaKnown RBP-0.01□□□□□ -2.41
snR50snR50 YIR035CP40579 254 aa-0.01□□□□□ -2.41
snR50snR50 SSU1P41930 458 aa-0.01□□□□□ -2.41
snR50snR50 YJR030CP47101 745 aa-0.01□□□□□ -2.41
snR50snR50 BAT2P47176 376 aaKnown RBP-0.01□□□□□ -2.41
snR50snR50 ASE1P50275 885 aa-0.01□□□□□ -2.41
snR50snR50 YIP5P53108 310 aa-0.01□□□□□ -2.41
snR50snR50 POP6P53218 158 aa-0.01□□□□□ -2.41
snR50snR50 CAF130P53280 1122 aaPredicted RBP-0.01□□□□□ -2.41
snR50snR50 GOR1P53839 350 aa-0.01□□□□□ -2.41
snR50snR50 CSL4P53859 292 aaPredicted RBP-0.01□□□□□ -2.41
snR50snR50 CNM67P53865 581 aaKnown RBP-0.01□□□□□ -2.41
snR50snR50 MUB1Q03162 620 aa-0.01□□□□□ -2.41
snR50snR50 UTP14Q04500 899 aaKnown RBP-0.01□□□□□ -2.41
snR50snR50 YOR365CQ08844 703 aa-0.01□□□□□ -2.41
snR50snR50 ARP7Q12406 477 aa-0.01□□□□□ -2.41
snR50snR50 TPI1P00942 248 aaKnown RBP-0.02□□□□□ -2.41
snR50snR50 EST1P17214 699 aaPredicted RBP-0.02□□□□□ -2.41
snR50snR50 RIT1P23796 513 aa-0.02□□□□□ -2.41
snR50snR50 PRR1P28708 518 aa-0.02□□□□□ -2.41
snR50snR50 CBF5P33322 483 aaKnown RBP RIP-Chip data-0.02□□□□□ -2.41not detected
snR50snR50 MFT1P33441 392 aaKnown RBP-0.02□□□□□ -2.41
snR50snR50 NUP120P35729 1037 aa-0.02□□□□□ -2.41
snR50snR50 RRP14P36080 434 aaKnown RBP-0.02□□□□□ -2.41
snR50snR50 GPI18P38211 433 aa-0.02□□□□□ -2.41
snR50snR50 YBR225WP38321 900 aa-0.02□□□□□ -2.41
snR50snR50 OM14P38325 134 aa-0.02□□□□□ -2.41
snR50snR50 YHR210CP38893 341 aa-0.02□□□□□ -2.41
snR50snR50 OST1P41543 476 aaKnown RBP-0.02□□□□□ -2.41
snR50snR50 ERR3P42222 437 aa-0.02□□□□□ -2.41
snR50snR50 NCA3P46955 337 aa-0.02□□□□□ -2.41
snR50snR50 SSN8P47821 323 aa-0.02□□□□□ -2.41
snR50snR50 YGR067CP53243 804 aa-0.02□□□□□ -2.41
snR50snR50 GPI1P53306 609 aa-0.02□□□□□ -2.41
snR50snR50 CBK1P53894 756 aa-0.02□□□□□ -2.41
snR50snR50 HXT11P54862 567 aa-0.02□□□□□ -2.41
snR50snR50 RSM23Q01163 450 aa-0.02□□□□□ -2.41
snR50snR50 INA17Q02888 182 aa-0.02□□□□□ -2.41
snR50snR50 MRP51Q02950 344 aa-0.02□□□□□ -2.41
snR50snR50 ODC1Q03028 310 aa-0.02□□□□□ -2.41
snR50snR50 YDR239CQ03780 787 aa-0.02□□□□□ -2.41
snR50snR50 VIP1Q06685 1146 aaKnown RBP-0.02□□□□□ -2.41
snR50snR50 IWR1Q07532 353 aaPredicted RBP-0.02□□□□□ -2.41
snR50snR50 YPL199CQ08954 240 aa-0.02□□□□□ -2.41
snR50snR50 NUR1Q12066 484 aa-0.02□□□□□ -2.41
snR50snR50 VPS54Q12071 889 aa-0.02□□□□□ -2.41
snR50snR50 JID1Q12350 301 aa-0.02□□□□□ -2.41
snR50snR50 RAD61Q99359 647 aa-0.02□□□□□ -2.41
snR50snR50 ADR1P07248 1323 aa-0.03□□□□□ -2.41
snR50snR50 NUP145P49687 1317 aa-0.03□□□□□ -2.41
snR50snR50 ATP2P00830 511 aaKnown RBP-0.03□□□□□ -2.41
snR50snR50 TRP1P00912 224 aa-0.03□□□□□ -2.41
snR50snR50 LEU4P06208 619 aaKnown RBP-0.03□□□□□ -2.41
snR50snR50 SNF6P18888 332 aa-0.03□□□□□ -2.41
snR50snR50 AAT2P23542 418 aaKnown RBP-0.03□□□□□ -2.41
snR50snR50 MKK1P32490 508 aa-0.03□□□□□ -2.41
snR50snR50 IES6P32617 166 aa-0.03□□□□□ -2.41
snR50snR50 ECT1P33412 323 aa-0.03□□□□□ -2.41
Retrieved 100 of 5,963 RNA–protein pairs in 149.9 ms