RNA–Protein interactions for RNA: snR40

snR40, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR40, Length 97 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR40snR40 UBX2Q04228 584 aa-1.82□□□□□ -2.7
snR40snR40 GTB1Q04924 702 aa-1.82□□□□□ -2.7
snR40snR40 HFI1Q12060 488 aa-1.82□□□□□ -2.7
snR40snR40 IZH2Q12442 317 aa-1.82□□□□□ -2.7
snR40snR40 RPS21BQ3E754 87 aaKnown RBP-1.82□□□□□ -2.7
snR40snR40 VPS5Q92331 675 aa-1.82□□□□□ -2.7
snR40snR40 FAR1P21268 830 aa-1.83□□□□□ -2.7
snR40snR40 APE2P32454 952 aaKnown RBP-1.83□□□□□ -2.7
snR40snR40 OM14P38325 134 aa-1.83□□□□□ -2.7
snR40snR40 FAU1P40099 211 aa-1.83□□□□□ -2.7
snR40snR40 GCD10P41814 478 aa-1.83□□□□□ -2.7
snR40snR40 YMR160WQ03823 816 aa-1.83□□□□□ -2.7
snR40snR40 YHR086W-AQ3E746 53 aa-1.83□□□□□ -2.7
snR40snR40 SPS22P25380 463 aa-1.84□□□□□ -2.7
snR40snR40 HXT4P32467 576 aa-1.84□□□□□ -2.7
snR40snR40 KAR9P32526 644 aa-1.84□□□□□ -2.7
snR40snR40 BAT1P38891 393 aaKnown RBP-1.84□□□□□ -2.7
snR40snR40 DJP1P40564 432 aa-1.84□□□□□ -2.7
snR40snR40 OST1P41543 476 aaKnown RBP-1.84□□□□□ -2.7
snR40snR40 ELP2P42935 788 aa-1.84□□□□□ -2.7
snR40snR40 HOT1Q03213 719 aa-1.84□□□□□ -2.7
snR40snR40 TRS31Q03337 283 aa-1.84□□□□□ -2.7
snR40snR40 STI1P15705 589 aaKnown RBP RIP-Chip data-1.85□□□□□ -2.71not detected
snR40snR40 GRX1P25373 110 aaKnown RBP-1.85□□□□□ -2.71
snR40snR40 YHR020WP38708 688 aaKnown RBP-1.85□□□□□ -2.71
snR40snR40 RRP4P38792 359 aaKnown RBP-1.85□□□□□ -2.71
snR40snR40 MNT2P53059 558 aa-1.85□□□□□ -2.71
snR40snR40 KAP120Q02932 1032 aa-1.85□□□□□ -2.71
snR40snR40 MEF1P25039 761 aa-1.86□□□□□ -2.71
snR40snR40 SWI4P25302 1093 aaKnown RBP-1.86□□□□□ -2.71
snR40snR40 ATG15P25641 520 aa-1.86□□□□□ -2.71
snR40snR40 ARP2P32381 391 aaKnown RBP-1.86□□□□□ -2.71
snR40snR40 SLD2P34252 453 aa-1.86□□□□□ -2.71
snR40snR40 OAF3P36023 863 aa-1.86□□□□□ -2.71
snR40snR40 TDA3P38758 523 aa-1.86□□□□□ -2.71
snR40snR40 DAN1P47178 298 aa-1.86□□□□□ -2.71
snR40snR40 DCP2P53550 970 aaKnown RBP-1.86□□□□□ -2.71
snR40snR40 SLD5Q03406 294 aa-1.86□□□□□ -2.71
snR40snR40 INP2Q03824 705 aa-1.86□□□□□ -2.71
snR40snR40 YOL160WQ08321 113 aa-1.86□□□□□ -2.71
snR40snR40 RVB2Q12464 471 aaKnown RBP-1.86□□□□□ -2.71
snR40snR40 SUC2P00724 532 aa-1.87□□□□□ -2.71
snR40snR40 PIF1P07271 859 aa-1.87□□□□□ -2.71
snR40snR40 ELO2P25358 347 aa-1.87□□□□□ -2.71
snR40snR40 PGS1P25578 521 aa-1.87□□□□□ -2.71
snR40snR40 RFA2P26754 273 aaKnown RBP-1.87□□□□□ -2.71
snR40snR40 GLC7P32598 312 aaKnown RBP-1.87□□□□□ -2.71
snR40snR40 YBL055CP34220 418 aaPredicted RBP-1.87□□□□□ -2.71
snR40snR40 NTR2P36118 322 aaPredicted RBP-1.87□□□□□ -2.71
snR40snR40 FRM2P37261 193 aa-1.87□□□□□ -2.71
snR40snR40 ROT2P38138 954 aa-1.87□□□□□ -2.71
snR40snR40 HXT6P39003 570 aaKnown RBP-1.87□□□□□ -2.71
snR40snR40 HXT7P39004 570 aa-1.87□□□□□ -2.71
snR40snR40 OXA1P39952 402 aa-1.87□□□□□ -2.71
snR40snR40 MRX1P40050 688 aa-1.87□□□□□ -2.71
snR40snR40 PYK2P52489 506 aaKnown RBP-1.87□□□□□ -2.71
snR40snR40 ESF2P53743 316 aaKnown RBP-1.87□□□□□ -2.71
snR40snR40 YPL113CQ02961 396 aa-1.87□□□□□ -2.71
snR40snR40 SWA2Q06677 668 aa-1.87□□□□□ -2.71
snR40snR40 FLC1Q08967 793 aa-1.87□□□□□ -2.71
snR40snR40 PHO80P20052 293 aa-1.88□□□□□ -2.71
snR40snR40 RPI1P23250 407 aaKnown RBP-1.88□□□□□ -2.71
snR40snR40 YCR007CP25354 239 aa-1.88□□□□□ -2.71
snR40snR40 CDC50P25656 391 aa-1.88□□□□□ -2.71
snR40snR40 RPS7AP26786 190 aaKnown RBP-1.88□□□□□ -2.71
snR40snR40 NDI1P32340 513 aa-1.88□□□□□ -2.71
snR40snR40 RPN11P43588 306 aaKnown RBP-1.88□□□□□ -2.71
snR40snR40 TOS2P50078 622 aa-1.88□□□□□ -2.71
snR40snR40 DMA2P53924 522 aa-1.88□□□□□ -2.71
snR40snR40 LSP1Q12230 341 aaKnown RBP-1.88□□□□□ -2.71
snR40snR40 JID1Q12350 301 aa-1.88□□□□□ -2.71
snR40snR40 CYR1P08678 2026 aaKnown RBP-1.89□□□□□ -2.71
snR40snR40 CYC3P06182 269 aa-1.89□□□□□ -2.71
snR40snR40 EXO70P19658 623 aa-1.89□□□□□ -2.71
snR40snR40 PRR1P28708 518 aa-1.89□□□□□ -2.71
snR40snR40 HIR2P32480 875 aa-1.89□□□□□ -2.71
snR40snR40 PET309P32522 965 aaPredicted RBP-1.89□□□□□ -2.71
snR40snR40 ECM10P39987 644 aa-1.89□□□□□ -2.71
snR40snR40 YFR020WP43600 232 aa-1.89□□□□□ -2.71
snR40snR40 PMT3P47190 753 aa-1.89□□□□□ -2.71
snR40snR40 CTF18P49956 741 aa-1.89□□□□□ -2.71
snR40snR40 NNF2P53253 936 aa-1.89□□□□□ -2.71
snR40snR40 ADA2Q02336 434 aa-1.89□□□□□ -2.71
snR40snR40 RPL21AQ02753 160 aaKnown RBP-1.89□□□□□ -2.71
snR40snR40 YMR244WQ04018 355 aa-1.89□□□□□ -2.71
snR40snR40 YET2Q04210 160 aa-1.89□□□□□ -2.71
snR40snR40 ECM38Q05902 660 aaPredicted RBP-1.89□□□□□ -2.71
snR40snR40 AIM6Q07716 390 aa-1.89□□□□□ -2.71
snR40snR40 RLP24Q07915 199 aaKnown RBP-1.89□□□□□ -2.71
snR40snR40 NGL1Q08213 363 aaKnown RBP-1.89□□□□□ -2.71
snR40snR40 RPL21BQ12672 160 aaKnown RBP-1.89□□□□□ -2.71
snR40snR40 APM4Q99186 491 aa-1.89□□□□□ -2.71
snR40snR40 PEP5P12868 1029 aa-1.9□□□□□ -2.71
snR40snR40 CRM1P30822 1084 aaKnown RBP-1.9□□□□□ -2.71
snR40snR40 ZIP1P31111 875 aa-1.9□□□□□ -2.71
snR40snR40 SOF1P33750 489 aaKnown RBP-1.9□□□□□ -2.71
snR40snR40 IRC5P43610 853 aa-1.9□□□□□ -2.71
snR40snR40 SHE4P51534 789 aa-1.9□□□□□ -2.71
snR40snR40 YNR071CP53757 342 aa-1.9□□□□□ -2.71
snR40snR40 RPT6Q01939 405 aaKnown RBP-1.9□□□□□ -2.71
Retrieved 100 of 5,963 RNA–protein pairs in 10.8 ms