RNA–Protein interactions for RNA: YPL065W

VPS28, Transcript of Component of the ESCRT-I complex, yeastyeast

Gene VPS28, Length 729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS28YPL065W BYE1P36106 594 aa4.7□□□□□ -1.66
VPS28YPL065W CAF130P53280 1122 aaPredicted RBP4.7□□□□□ -1.66
VPS28YPL065W DIC1Q06143 298 aa4.7□□□□□ -1.66
VPS28YPL065W SSK1Q07084 712 aa4.7□□□□□ -1.66
VPS28YPL065W SEC39Q12745 709 aa4.7□□□□□ -1.66
VPS28YPL065W YML133CQ03099 1374 aa4.69□□□□□ -1.66
VPS28YPL065W YLL067CQ07888 1374 aa4.69□□□□□ -1.66
VPS28YPL065W YLL066CQ99208 1374 aa4.69□□□□□ -1.66
VPS28YPL065W SNC1P31109 117 aa4.69□□□□□ -1.66
VPS28YPL065W SAS3P34218 831 aa4.69□□□□□ -1.66
VPS28YPL065W PHD1P36093 366 aa4.69□□□□□ -1.66
VPS28YPL065W YKL023WP36103 277 aaKnown RBP4.69□□□□□ -1.66
VPS28YPL065W ERG7P38604 731 aa4.69□□□□□ -1.66
VPS28YPL065W LSM5P40089 93 aaKnown RBP4.69□□□□□ -1.66
VPS28YPL065W IAH1P41734 238 aa4.69□□□□□ -1.66
VPS28YPL065W SHR3Q02774 210 aa4.69□□□□□ -1.66
VPS28YPL065W PDS5Q04264 1277 aa4.69□□□□□ -1.66
VPS28YPL065W YMR254CQ04838 102 aa4.69□□□□□ -1.66
VPS28YPL065W YDL007C-AQ2V2Q0 85 aa4.69□□□□□ -1.66
VPS28YPL065W PEP5P12868 1029 aa4.68□□□□□ -1.66
VPS28YPL065W PMS1P14242 873 aa4.68□□□□□ -1.66
VPS28YPL065W SUI2P20459 304 aaKnown RBP4.68□□□□□ -1.66
VPS28YPL065W MUM2P38236 366 aa4.68□□□□□ -1.66
VPS28YPL065W YHR210CP38893 341 aa4.68□□□□□ -1.66
VPS28YPL065W HXT14P42833 540 aa4.68□□□□□ -1.66
VPS28YPL065W THP1Q08231 455 aa4.68□□□□□ -1.66
VPS28YPL065W YOR365CQ08844 703 aa4.68□□□□□ -1.66
VPS28YPL065W APL5Q08951 932 aaKnown RBP4.68□□□□□ -1.66
VPS28YPL065W YMR230W-AQ3E7B5 62 aa4.68□□□□□ -1.66
VPS28YPL065W RAD52P06778 471 aaKnown RBP4.67□□□□□ -1.66
VPS28YPL065W PRP2P20095 876 aaPredicted RBP4.67□□□□□ -1.66
VPS28YPL065W SHP1P34223 423 aa4.67□□□□□ -1.66
VPS28YPL065W AXL1P40851 1208 aa4.67□□□□□ -1.66
VPS28YPL065W RQC1Q05468 723 aaKnown RBP4.67□□□□□ -1.66
VPS28YPL065W SFI1Q12369 946 aa4.67□□□□□ -1.66
VPS28YPL065W COR1P07256 457 aa4.66□□□□□ -1.66
VPS28YPL065W CDC23P16522 626 aa4.66□□□□□ -1.66
VPS28YPL065W PAP1P29468 568 aaKnown RBP4.66□□□□□ -1.66
VPS28YPL065W NFU1P32860 256 aa4.66□□□□□ -1.66
VPS28YPL065W SEC66P33754 206 aa4.66□□□□□ -1.66
VPS28YPL065W EFM2P38347 419 aa4.66□□□□□ -1.66
VPS28YPL065W KEL1P38853 1164 aaKnown RBP4.66□□□□□ -1.66
VPS28YPL065W TIF4631P39935 952 aaKnown RBP4.66□□□□□ -1.66
VPS28YPL065W ALK1P43633 760 aaKnown RBP4.66□□□□□ -1.66
VPS28YPL065W CRZ1P53968 678 aa4.66□□□□□ -1.66
VPS28YPL065W RHO4Q00246 291 aa4.66□□□□□ -1.66
VPS28YPL065W RSF1Q05043 376 aa4.66□□□□□ -1.66
VPS28YPL065W FMP45Q07651 309 aa4.66□□□□□ -1.66
VPS28YPL065W TIP41Q12199 356 aa4.66□□□□□ -1.66
VPS28YPL065W RPL31BP0C2H9 113 aaKnown RBP4.65□□□□□ -1.67
VPS28YPL065W SPC34P36131 295 aa4.65□□□□□ -1.67
VPS28YPL065W TCM62P38228 572 aaKnown RBP4.65□□□□□ -1.67
VPS28YPL065W MBB1P39534 108 aa4.65□□□□□ -1.67
VPS28YPL065W YER130CP39959 443 aa4.65□□□□□ -1.67
VPS28YPL065W AZF1P41696 914 aa4.65□□□□□ -1.67
VPS28YPL065W CUL3P53202 744 aa4.65□□□□□ -1.67
VPS28YPL065W HEF3P53978 1044 aaKnown RBP4.65□□□□□ -1.67
VPS28YPL065W YDR415CQ04033 374 aaPredicted RBP4.65□□□□□ -1.67
VPS28YPL065W TAP42Q04372 366 aa4.65□□□□□ -1.67
VPS28YPL065W RBS1Q05672 457 aaKnown RBP4.65□□□□□ -1.67
VPS28YPL065W PDH1Q12428 516 aaKnown RBP4.65□□□□□ -1.67
VPS28YPL065W RPL3P14126 387 aaKnown RBP4.64□□□□□ -1.67
VPS28YPL065W HNM1P19807 563 aa4.64□□□□□ -1.67
VPS28YPL065W RPC53P25441 422 aa4.64□□□□□ -1.67
VPS28YPL065W ACH1P32316 526 aa4.64□□□□□ -1.67
VPS28YPL065W RAD24P32641 659 aa4.64□□□□□ -1.67
VPS28YPL065W MSN2P33748 704 aa4.64□□□□□ -1.67
VPS28YPL065W BNA4P38169 460 aa4.64□□□□□ -1.67
VPS28YPL065W ATG27P46989 271 aa4.64□□□□□ -1.67
VPS28YPL065W YJR154WP47181 346 aa4.64□□□□□ -1.67
VPS28YPL065W ZPR1P53303 486 aaKnown RBP4.64□□□□□ -1.67
VPS28YPL065W RPA49Q01080 415 aaPredicted RBP4.64□□□□□ -1.67
VPS28YPL065W GIR2Q03768 265 aaPredicted RBP4.64□□□□□ -1.67
VPS28YPL065W MSS11Q03825 758 aa4.64□□□□□ -1.67
VPS28YPL065W BAR1P12630 587 aa4.63□□□□□ -1.67
VPS28YPL065W CLB3P24870 427 aa4.63□□□□□ -1.67
VPS28YPL065W BUD14P27637 709 aa4.63□□□□□ -1.67
VPS28YPL065W HXT3P32466 567 aaKnown RBP4.63□□□□□ -1.67
VPS28YPL065W DUG2P38149 878 aa4.63□□□□□ -1.67
VPS28YPL065W OTU2P38747 307 aaKnown RBP4.63□□□□□ -1.67
VPS28YPL065W GUF1P46943 645 aa4.63□□□□□ -1.67
VPS28YPL065W TDA7P53882 636 aaPredicted RBP4.63□□□□□ -1.67
VPS28YPL065W YMR087WQ04299 284 aa4.63□□□□□ -1.67
VPS28YPL065W ARP6Q12509 438 aa4.63□□□□□ -1.67
VPS28YPL065W TYR1P20049 452 aa4.62□□□□□ -1.67
VPS28YPL065W PPH22P23595 377 aa4.62□□□□□ -1.67
VPS28YPL065W YJL070CP40361 888 aa4.62□□□□□ -1.67
VPS28YPL065W ALT2P52892 507 aa4.62□□□□□ -1.67
VPS28YPL065W SAM50P53969 484 aa4.62□□□□□ -1.67
VPS28YPL065W SLG1P54867 378 aa4.62□□□□□ -1.67
VPS28YPL065W RBA50Q04418 439 aa4.62□□□□□ -1.67
VPS28YPL065W GLO2Q05584 274 aa4.62□□□□□ -1.67
VPS28YPL065W YLR352WQ06479 807 aa4.62□□□□□ -1.67
VPS28YPL065W CSR2Q12734 1121 aa4.62□□□□□ -1.67
VPS28YPL065W YRF1-4O13559 1382 aa4.62□□□□□ -1.67
VPS28YPL065W RAV1P47104 1357 aa4.62□□□□□ -1.67
VPS28YPL065W SUC2P00724 532 aa4.61□□□□□ -1.67
VPS28YPL065W PDX1P16451 410 aa4.61□□□□□ -1.67
VPS28YPL065W GLN3P18494 730 aa4.61□□□□□ -1.67
VPS28YPL065W ERG1P32476 496 aaKnown RBP4.61□□□□□ -1.67
Retrieved 100 of 5,963 RNA–protein pairs in 21.2 ms