RNA–Protein interactions for RNA: YPL045W

VPS16, Transcript of Subunit of the HOPS and the CORVET complexes, yeastyeast

Gene VPS16, Length 2,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS16YPL045W MDM20Q12387 796 aaKnown RBP2.34□□□□□ -2.04
VPS16YPL045W AHA1Q12449 350 aaKnown RBP2.34□□□□□ -2.04
VPS16YPL045W IQG1Q12280 1495 aa2.33□□□□□ -2.04
VPS16YPL045W RPC40P07703 335 aaKnown RBP2.33□□□□□ -2.04
VPS16YPL045W RPL31BP0C2H9 113 aaKnown RBP2.33□□□□□ -2.04
VPS16YPL045W BOS1P25385 244 aa2.33□□□□□ -2.04
VPS16YPL045W YIM1P28625 365 aa2.33□□□□□ -2.04
VPS16YPL045W YEL043WP32618 956 aa2.33□□□□□ -2.04
VPS16YPL045W PIM1P36775 1133 aa2.33□□□□□ -2.04
VPS16YPL045W YMC2P38087 329 aa2.33□□□□□ -2.04
VPS16YPL045W ICS2P38284 255 aa2.33□□□□□ -2.04
VPS16YPL045W IMD2P38697 523 aaKnown RBP2.33□□□□□ -2.04
VPS16YPL045W PCL5P38794 229 aa2.33□□□□□ -2.04
VPS16YPL045W MIT1P40002 666 aa2.33□□□□□ -2.04
VPS16YPL045W OPT1P40897 799 aa2.33□□□□□ -2.04
VPS16YPL045W YJL107CP42947 387 aa2.33□□□□□ -2.04
VPS16YPL045W YFL015CP43578 164 aa2.33□□□□□ -2.04
VPS16YPL045W ECM27P47144 725 aa2.33□□□□□ -2.04
VPS16YPL045W COS5P47187 383 aa2.33□□□□□ -2.04
VPS16YPL045W YGL138CP53122 345 aa2.33□□□□□ -2.04
VPS16YPL045W PRP43P53131 767 aaKnown RBP2.33□□□□□ -2.04
VPS16YPL045W CAF130P53280 1122 aaPredicted RBP2.33□□□□□ -2.04
VPS16YPL045W YPR003CP53394 754 aa2.33□□□□□ -2.04
VPS16YPL045W YNL144CP53907 740 aa2.33□□□□□ -2.04
VPS16YPL045W PRO2P54885 456 aaKnown RBP2.33□□□□□ -2.04
VPS16YPL045W YMR160WQ03823 816 aa2.33□□□□□ -2.04
VPS16YPL045W COS7Q07788 383 aa2.33□□□□□ -2.04
VPS16YPL045W RLP24Q07915 199 aaKnown RBP2.33□□□□□ -2.04
VPS16YPL045W SIL1Q08199 421 aa2.33□□□□□ -2.04
VPS16YPL045W APL4Q12028 832 aa2.33□□□□□ -2.04
VPS16YPL045W DRS2P39524 1355 aa2.33□□□□□ -2.04
VPS16YPL045W GEA1P47102 1408 aaPredicted RBP2.33□□□□□ -2.04
VPS16YPL045W RPL6BP05739 176 aaKnown RBP2.32□□□□□ -2.04
VPS16YPL045W CHO1P08456 276 aa2.32□□□□□ -2.04
VPS16YPL045W SPE2P21182 396 aa2.32□□□□□ -2.04
VPS16YPL045W HCM1P25364 564 aa2.32□□□□□ -2.04
VPS16YPL045W YJU2P28320 278 aaPredicted RBP2.32□□□□□ -2.04
VPS16YPL045W NTC20P38302 140 aaPredicted RBP2.32□□□□□ -2.04
VPS16YPL045W ANS1P38832 159 aa2.32□□□□□ -2.04
VPS16YPL045W OSW5P40219 148 aa2.32□□□□□ -2.04
VPS16YPL045W TDA10P42938 290 aa2.32□□□□□ -2.04
VPS16YPL045W CCT7P42943 550 aaKnown RBP2.32□□□□□ -2.04
VPS16YPL045W RPS10BP46784 105 aaKnown RBP2.32□□□□□ -2.04
VPS16YPL045W SHE4P51534 789 aa2.32□□□□□ -2.04
VPS16YPL045W RPT4P53549 437 aaKnown RBP2.32□□□□□ -2.04
VPS16YPL045W AAT1Q01802 451 aa2.32□□□□□ -2.04
VPS16YPL045W SKO1Q02100 647 aa2.32□□□□□ -2.04
VPS16YPL045W RPL6AQ02326 176 aaKnown RBP2.32□□□□□ -2.04
VPS16YPL045W ADA2Q02336 434 aa2.32□□□□□ -2.04
VPS16YPL045W RRP45Q05636 305 aaKnown RBP2.32□□□□□ -2.04
VPS16YPL045W RPS10AQ08745 105 aaPredicted RBP2.32□□□□□ -2.04
VPS16YPL045W RTC1Q08281 1341 aa2.32□□□□□ -2.04
VPS16YPL045W ILV2P07342 687 aaKnown RBP2.32□□□□□ -2.04
VPS16YPL045W SPC110P32380 944 aa2.32□□□□□ -2.04
VPS16YPL045W PXL1P36166 706 aa2.32□□□□□ -2.04
VPS16YPL045W YHL017WP38745 532 aa2.32□□□□□ -2.04
VPS16YPL045W WSS1P38838 269 aa2.32□□□□□ -2.04
VPS16YPL045W BDH2P39713 417 aa2.32□□□□□ -2.04
VPS16YPL045W CHS6P40955 746 aa2.32□□□□□ -2.04
VPS16YPL045W YJL132WP47014 750 aa2.32□□□□□ -2.04
VPS16YPL045W URB2P47108 1174 aa2.32□□□□□ -2.04
VPS16YPL045W ERG26P53199 349 aaKnown RBP2.32□□□□□ -2.04
VPS16YPL045W PDR16P53860 351 aaKnown RBP2.32□□□□□ -2.04
VPS16YPL045W PPM1Q04081 328 aa2.32□□□□□ -2.04
VPS16YPL045W SPH1Q06160 661 aa2.32□□□□□ -2.04
VPS16YPL045W ETT1Q08421 412 aaKnown RBP2.32□□□□□ -2.04
VPS16YPL045W AEP3Q12089 606 aa2.32□□□□□ -2.04
VPS16YPL045W RRP36Q12481 300 aaPredicted RBP2.32□□□□□ -2.04
VPS16YPL045W NUP157P40064 1391 aaKnown RBP2.31□□□□□ -2.04
VPS16YPL045W ARG81P05085 880 aa2.31□□□□□ -2.04
VPS16YPL045W URA4P20051 364 aa2.31□□□□□ -2.04
VPS16YPL045W SUI2P20459 304 aaKnown RBP2.31□□□□□ -2.04
VPS16YPL045W TKL1P23254 680 aaKnown RBP2.31□□□□□ -2.04
VPS16YPL045W BUD5P25300 642 aaPredicted RBP2.31□□□□□ -2.04
VPS16YPL045W AFG1P32317 509 aa2.31□□□□□ -2.04
VPS16YPL045W SUR1P33300 382 aa2.31□□□□□ -2.04
VPS16YPL045W RPL32P38061 130 aaKnown RBP2.31□□□□□ -2.04
VPS16YPL045W MLH1P38920 769 aa2.31□□□□□ -2.04
VPS16YPL045W CIN4P39110 191 aa2.31□□□□□ -2.04
VPS16YPL045W EXO1P39875 702 aa2.31□□□□□ -2.04
VPS16YPL045W RTT105P40063 208 aa2.31□□□□□ -2.04
VPS16YPL045W CWC22P53333 577 aaKnown RBP2.31□□□□□ -2.04
VPS16YPL045W HST1P53685 503 aa2.31□□□□□ -2.04
VPS16YPL045W CPR8P53728 308 aa2.31□□□□□ -2.04
VPS16YPL045W YNL058CP53947 316 aa2.31□□□□□ -2.04
VPS16YPL045W TOF2Q02208 771 aa2.31□□□□□ -2.04
VPS16YPL045W YMR206WQ03695 313 aa2.31□□□□□ -2.04
VPS16YPL045W RAD34Q06665 692 aa2.31□□□□□ -2.04
VPS16YPL045W RTC5Q12108 567 aaKnown RBP2.31□□□□□ -2.04
VPS16YPL045W MRH1Q12117 320 aaPredicted RBP2.31□□□□□ -2.04
VPS16YPL045W UBX3Q12229 455 aa2.31□□□□□ -2.04
VPS16YPL045W MMS1Q06211 1407 aa2.31□□□□□ -2.04
VPS16YPL045W YLR278CQ05854 1341 aa2.31□□□□□ -2.04
VPS16YPL045W RAP1P11938 827 aa2.31□□□□□ -2.04
VPS16YPL045W PMA2P19657 947 aa2.31□□□□□ -2.04
VPS16YPL045W CLN1P20437 546 aa2.31□□□□□ -2.04
VPS16YPL045W GAC1P28006 793 aa2.31□□□□□ -2.04
VPS16YPL045W CRM1P30822 1084 aaKnown RBP2.31□□□□□ -2.04
VPS16YPL045W PCH2P38126 564 aa2.31□□□□□ -2.04
VPS16YPL045W PFF1P38244 976 aa2.31□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 72.8 ms