RNA–Protein interactions for RNA: YOR106W

VAM3, Transcript of Syntaxin-like vacuolar t-SNARE, yeastyeast

Gene VAM3, Length 852 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM3YOR106W SHO1P40073 367 aa4.36□□□□□ -1.71
VAM3YOR106W NGL3Q03210 505 aa4.36□□□□□ -1.71
VAM3YOR106W SLD5Q03406 294 aa4.36□□□□□ -1.71
VAM3YOR106W BNA5Q05979 453 aa4.36□□□□□ -1.71
VAM3YOR106W VPS74Q06385 345 aa4.36□□□□□ -1.71
VAM3YOR106W HEM2P05373 342 aa4.35□□□□□ -1.71
VAM3YOR106W MRP13P12686 339 aa4.35□□□□□ -1.71
VAM3YOR106W ATR1P13090 542 aa4.35□□□□□ -1.71
VAM3YOR106W EXO70P19658 623 aa4.35□□□□□ -1.71
VAM3YOR106W SAC6P32599 642 aaKnown RBP4.35□□□□□ -1.71
VAM3YOR106W ALG8P40351 577 aa4.35□□□□□ -1.71
VAM3YOR106W ALK1P43633 760 aaKnown RBP4.35□□□□□ -1.71
VAM3YOR106W IRC15Q02733 499 aa4.35□□□□□ -1.71
VAM3YOR106W THP1Q08231 455 aa4.35□□□□□ -1.71
VAM3YOR106W LSP1Q12230 341 aaKnown RBP4.35□□□□□ -1.71
VAM3YOR106W PEP4P07267 405 aaKnown RBP4.34□□□□□ -1.71
VAM3YOR106W SEC53P07283 254 aaKnown RBP4.34□□□□□ -1.71
VAM3YOR106W SAN1P22470 610 aa4.34□□□□□ -1.71
VAM3YOR106W TIF3P34167 436 aaKnown RBP4.34□□□□□ -1.71
VAM3YOR106W SHP1P34223 423 aa4.34□□□□□ -1.71
VAM3YOR106W PCA1P38360 1216 aa4.34□□□□□ -1.71
VAM3YOR106W CCT6P39079 546 aa4.34□□□□□ -1.71
VAM3YOR106W FLC2P39719 783 aa4.34□□□□□ -1.71
VAM3YOR106W IDP2P41939 412 aa4.34□□□□□ -1.71
VAM3YOR106W DRN1P53255 507 aaKnown RBP4.34□□□□□ -1.71
VAM3YOR106W TOF2Q02208 771 aa4.34□□□□□ -1.71
VAM3YOR106W YEH1Q07804 573 aa4.34□□□□□ -1.71
VAM3YOR106W ENT1Q12518 454 aa4.34□□□□□ -1.71
VAM3YOR106W PAP1P29468 568 aaKnown RBP4.33□□□□□ -1.72
VAM3YOR106W UTR4P32626 227 aa4.33□□□□□ -1.72
VAM3YOR106W ELP2P42935 788 aa4.33□□□□□ -1.72
VAM3YOR106W RBG2P53295 368 aaKnown RBP4.33□□□□□ -1.72
VAM3YOR106W PHO92Q06390 306 aa4.33□□□□□ -1.72
VAM3YOR106W NMD4Q12129 218 aa4.33□□□□□ -1.72
VAM3YOR106W YPT6Q99260 215 aa4.33□□□□□ -1.72
VAM3YOR106W YCR022CP25620 114 aa4.32□□□□□ -1.72
VAM3YOR106W PAH1P32567 862 aa4.32□□□□□ -1.72
VAM3YOR106W BNA4P38169 460 aa4.32□□□□□ -1.72
VAM3YOR106W YPI1P43587 155 aa4.32□□□□□ -1.72
VAM3YOR106W IMD4P50094 524 aaKnown RBP4.32□□□□□ -1.72
VAM3YOR106W SMA2Q04658 369 aa4.32□□□□□ -1.72
VAM3YOR106W COQ9Q05779 260 aa4.32□□□□□ -1.72
VAM3YOR106W SUC2P00724 532 aa4.31□□□□□ -1.72
VAM3YOR106W TIF5P38431 405 aaKnown RBP4.31□□□□□ -1.72
VAM3YOR106W GPI1P53306 609 aa4.31□□□□□ -1.72
VAM3YOR106W WSC2P53832 503 aa4.31□□□□□ -1.72
VAM3YOR106W RCN2Q12044 265 aa4.31□□□□□ -1.72
VAM3YOR106W SEM1O94742 89 aa4.3□□□□□ -1.72
VAM3YOR106W REV1P12689 985 aa4.3□□□□□ -1.72
VAM3YOR106W PUT3P25502 979 aaPredicted RBP4.3□□□□□ -1.72
VAM3YOR106W MSR1P38714 643 aa4.3□□□□□ -1.72
VAM3YOR106W TIF4631P39935 952 aaKnown RBP4.3□□□□□ -1.72
VAM3YOR106W SPG5P42933 373 aa4.3□□□□□ -1.72
VAM3YOR106W YGL242CP53066 181 aa4.3□□□□□ -1.72
VAM3YOR106W TCD2P36101 447 aaKnown RBP4.29□□□□□ -1.72
VAM3YOR106W NOP4P37838 685 aaKnown RBP4.29□□□□□ -1.72
VAM3YOR106W DUG2P38149 878 aa4.29□□□□□ -1.72
VAM3YOR106W TCM62P38228 572 aaKnown RBP4.29□□□□□ -1.72
VAM3YOR106W REG2P38232 338 aa4.29□□□□□ -1.72
VAM3YOR106W YGR066CP53242 292 aa4.29□□□□□ -1.72
VAM3YOR106W YCL021W-AQ96VH3 125 aa4.29□□□□□ -1.72
VAM3YOR106W PEP3P27801 918 aa4.28□□□□□ -1.72
VAM3YOR106W YME1P32795 747 aa4.28□□□□□ -1.72
VAM3YOR106W HAT2P39984 401 aa4.28□□□□□ -1.72
VAM3YOR106W NOP16P40007 231 aaKnown RBP4.28□□□□□ -1.72
VAM3YOR106W VID27P40157 782 aa4.28□□□□□ -1.72
VAM3YOR106W GWT1P47026 490 aa4.28□□□□□ -1.72
VAM3YOR106W ZPR1P53303 486 aaKnown RBP4.28□□□□□ -1.72
VAM3YOR106W MSO1P53604 210 aaKnown RBP4.28□□□□□ -1.72
VAM3YOR106W HEF3P53978 1044 aaKnown RBP4.28□□□□□ -1.72
VAM3YOR106W FIN1Q03898 291 aa4.28□□□□□ -1.72
VAM3YOR106W RBS1Q05672 457 aaKnown RBP4.28□□□□□ -1.72
VAM3YOR106W CTI6Q08923 506 aa4.28□□□□□ -1.72
VAM3YOR106W RLM1Q12224 676 aa4.28□□□□□ -1.72
VAM3YOR106W CTF3Q12748 733 aa4.28□□□□□ -1.72
VAM3YOR106W YJR112W-AQ3E743 109 aa4.28□□□□□ -1.72
VAM3YOR106W BRR1Q99177 341 aaPredicted RBP4.28□□□□□ -1.72
VAM3YOR106W LPD1P09624 499 aaKnown RBP4.27□□□□□ -1.73
VAM3YOR106W PMR1P13586 950 aa4.27□□□□□ -1.73
VAM3YOR106W HSC82P15108 705 aaKnown RBP4.27□□□□□ -1.73
VAM3YOR106W AAC3P18238 307 aa4.27□□□□□ -1.73
VAM3YOR106W MSN2P33748 704 aa4.27□□□□□ -1.73
VAM3YOR106W SWH1P35845 1188 aa4.27□□□□□ -1.73
VAM3YOR106W AIM22P47051 409 aa4.27□□□□□ -1.73
VAM3YOR106W VPS38Q05919 439 aa4.27□□□□□ -1.73
VAM3YOR106W HNT3Q08702 217 aa4.27□□□□□ -1.73
VAM3YOR106W YDR056CQ12025 205 aa4.27□□□□□ -1.73
VAM3YOR106W CFT2Q12102 859 aaPredicted RBP4.27□□□□□ -1.73
VAM3YOR106W AVL9Q12500 764 aa4.27□□□□□ -1.73
VAM3YOR106W CPR1P14832 162 aaKnown RBP4.26□□□□□ -1.73
VAM3YOR106W GLK1P17709 500 aaKnown RBP4.26□□□□□ -1.73
VAM3YOR106W FUN19P28003 413 aaPredicted RBP4.26□□□□□ -1.73
VAM3YOR106W MKT1P40850 830 aaKnown RBP4.26□□□□□ -1.73
VAM3YOR106W COR1P07256 457 aa4.25□□□□□ -1.73
VAM3YOR106W CBS1P14066 229 aa4.25□□□□□ -1.73
VAM3YOR106W PRP2P20095 876 aaPredicted RBP4.25□□□□□ -1.73
VAM3YOR106W RSM22P36056 628 aa4.25□□□□□ -1.73
VAM3YOR106W TMA108P40462 946 aa4.25□□□□□ -1.73
VAM3YOR106W SGN1P40561 250 aaKnown RBP RIP-Chip data4.25□□□□□ -1.73not detected
VAM3YOR106W MRX6P48564 524 aa4.25□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 41.8 ms