RNA–Protein interactions for RNA: YOL133W

HRT1, Transcript of RING-H2 domain core subunit of multiple ubiquitin ligase complexes, yeast

Gene HRT1, Length 366 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HRT1	YOL133W	ECM15	P35195	104 aa		4.67	□□□□□ -1.66
HRT1	YOL133W	TCM62	P38228	572 aa	Known RBP	4.67	□□□□□ -1.66
HRT1	YOL133W	SRB7	P47822	140 aa		4.67	□□□□□ -1.66
HRT1	YOL133W	YGR250C	P53316	781 aa	Known RBP	4.67	□□□□□ -1.66
HRT1	YOL133W	RPT6	Q01939	405 aa	Known RBP	4.67	□□□□□ -1.66
HRT1	YOL133W	RPM2	Q02773	1202 aa		4.67	□□□□□ -1.66
HRT1	YOL133W	HCR1	Q05775	265 aa	Known RBP	4.67	□□□□□ -1.66
HRT1	YOL133W	YDL057W	Q07379	328 aa		4.67	□□□□□ -1.66
HRT1	YOL133W	NDD1	Q08887	554 aa		4.67	□□□□□ -1.66
HRT1	YOL133W	YDL007C-A	Q2V2Q0	85 aa		4.67	□□□□□ -1.66
HRT1	YOL133W	GPI10	P30777	616 aa		4.66	□□□□□ -1.66
HRT1	YOL133W	SHP1	P34223	423 aa		4.66	□□□□□ -1.66
HRT1	YOL133W	DUG2	P38149	878 aa		4.66	□□□□□ -1.66
HRT1	YOL133W	VID24	P38263	362 aa		4.66	□□□□□ -1.66
HRT1	YOL133W	SMF1	P38925	575 aa		4.66	□□□□□ -1.66
HRT1	YOL133W	DOT5	P40553	215 aa		4.66	□□□□□ -1.66
HRT1	YOL133W	ARF3	P40994	183 aa	RIP-Chip data	4.66	□□□□□ -1.66	not detected
HRT1	YOL133W	ALK1	P43633	760 aa	Known RBP	4.66	□□□□□ -1.66
HRT1	YOL133W	STB2	P46679	850 aa		4.66	□□□□□ -1.66
HRT1	YOL133W	ALT2	P52892	507 aa		4.66	□□□□□ -1.66
HRT1	YOL133W	CUL3	P53202	744 aa		4.66	□□□□□ -1.66
HRT1	YOL133W	TWF1	P53250	332 aa		4.66	□□□□□ -1.66
HRT1	YOL133W	DUG3	P53871	357 aa		4.66	□□□□□ -1.66
HRT1	YOL133W	TDA7	P53882	636 aa	Predicted RBP	4.66	□□□□□ -1.66
HRT1	YOL133W	HEF3	P53978	1044 aa	Known RBP	4.66	□□□□□ -1.66
HRT1	YOL133W	SHR3	Q02774	210 aa		4.66	□□□□□ -1.66
HRT1	YOL133W	FMP45	Q07651	309 aa		4.66	□□□□□ -1.66
HRT1	YOL133W	CDC45	Q08032	650 aa		4.66	□□□□□ -1.66
HRT1	YOL133W	YOL159C-A	Q3E769	90 aa		4.66	□□□□□ -1.66
HRT1	YOL133W	PPZ1	P26570	692 aa		4.65	□□□□□ -1.67
HRT1	YOL133W	LOS1	P33418	1100 aa	Predicted RBP	4.65	□□□□□ -1.67
HRT1	YOL133W	CSR2	Q12734	1121 aa		4.65	□□□□□ -1.67
HRT1	YOL133W	BUD14	P27637	709 aa		4.64	□□□□□ -1.67
HRT1	YOL133W	MIC60	P36112	540 aa		4.64	□□□□□ -1.67
HRT1	YOL133W	YTA12	P40341	825 aa		4.64	□□□□□ -1.67
HRT1	YOL133W	CSM2	P40465	213 aa		4.64	□□□□□ -1.67
HRT1	YOL133W	SLD5	Q03406	294 aa		4.64	□□□□□ -1.67
HRT1	YOL133W	YDR239C	Q03780	787 aa		4.64	□□□□□ -1.67
HRT1	YOL133W	RQC1	Q05468	723 aa	Known RBP	4.64	□□□□□ -1.67
HRT1	YOL133W	THP1	Q08231	455 aa		4.64	□□□□□ -1.67
HRT1	YOL133W	ATG29	Q12092	213 aa		4.64	□□□□□ -1.67
HRT1	YOL133W	SCM3	Q12334	223 aa		4.64	□□□□□ -1.67
HRT1	YOL133W	RTN2	Q12443	393 aa		4.64	□□□□□ -1.67
HRT1	YOL133W	INH1	P01097	85 aa		4.63	□□□□□ -1.67
HRT1	YOL133W	COR1	P07256	457 aa		4.63	□□□□□ -1.67
HRT1	YOL133W	SNT1	P25357	1226 aa		4.63	□□□□□ -1.67
HRT1	YOL133W	PMT1	P33775	817 aa		4.63	□□□□□ -1.67
HRT1	YOL133W	CMC1	P36064	111 aa		4.63	□□□□□ -1.67
HRT1	YOL133W	RIM2	P38127	377 aa		4.63	□□□□□ -1.67
HRT1	YOL133W	OSH3	P38713	996 aa	Known RBP	4.63	□□□□□ -1.67
HRT1	YOL133W	MBB1	P39534	108 aa		4.63	□□□□□ -1.67
HRT1	YOL133W	LSM5	P40089	93 aa	Known RBP	4.63	□□□□□ -1.67
HRT1	YOL133W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	4.63	□□□□□ -1.67	not detected
HRT1	YOL133W	RBS1	Q05672	457 aa	Known RBP	4.63	□□□□□ -1.67
HRT1	YOL133W	KEL3	Q08979	651 aa	Predicted RBP	4.63	□□□□□ -1.67
HRT1	YOL133W	RPL31B	P0C2H9	113 aa	Known RBP	4.62	□□□□□ -1.67
HRT1	YOL133W	APE1	P14904	514 aa		4.62	□□□□□ -1.67
HRT1	YOL133W	SUI2	P20459	304 aa	Known RBP	4.62	□□□□□ -1.67
HRT1	YOL133W	YCR007C	P25354	239 aa		4.62	□□□□□ -1.67
HRT1	YOL133W	ATP11	P32453	318 aa		4.62	□□□□□ -1.67
HRT1	YOL133W	YME1	P32795	747 aa		4.62	□□□□□ -1.67
HRT1	YOL133W	SIP2	P34164	415 aa	Known RBP	4.62	□□□□□ -1.67
HRT1	YOL133W	BZZ1	P38822	633 aa		4.62	□□□□□ -1.67
HRT1	YOL133W	VPS52	P39904	641 aa		4.62	□□□□□ -1.67
HRT1	YOL133W	KTR5	P53966	522 aa	Predicted RBP	4.62	□□□□□ -1.67
HRT1	YOL133W	SYO1	Q07395	620 aa		4.62	□□□□□ -1.67
HRT1	YOL133W	RED1	P14291	827 aa		4.61	□□□□□ -1.67
HRT1	YOL133W	YUR1	P26725	428 aa		4.61	□□□□□ -1.67
HRT1	YOL133W	UTR4	P32626	227 aa		4.61	□□□□□ -1.67
HRT1	YOL133W	VPS17	P32913	551 aa		4.61	□□□□□ -1.67
HRT1	YOL133W	BNA4	P38169	460 aa		4.61	□□□□□ -1.67
HRT1	YOL133W	DIM1	P41819	318 aa	Known RBP	4.61	□□□□□ -1.67
HRT1	YOL133W	CAF130	P53280	1122 aa	Predicted RBP	4.61	□□□□□ -1.67
HRT1	YOL133W	RPA49	Q01080	415 aa	Predicted RBP	4.61	□□□□□ -1.67
HRT1	YOL133W	PDS5	Q04264	1277 aa		4.61	□□□□□ -1.67
HRT1	YOL133W	YLR287C	Q05881	355 aa		4.61	□□□□□ -1.67
HRT1	YOL133W	NRT1	Q08485	598 aa		4.61	□□□□□ -1.67
HRT1	YOL133W	RIM20	Q12033	661 aa		4.61	□□□□□ -1.67
HRT1	YOL133W	DAP1	Q12091	152 aa		4.61	□□□□□ -1.67
HRT1	YOL133W	NFU1	P32860	256 aa		4.6	□□□□□ -1.67
HRT1	YOL133W	YJL070C	P40361	888 aa		4.6	□□□□□ -1.67
HRT1	YOL133W	MEP2	P41948	499 aa		4.6	□□□□□ -1.67
HRT1	YOL133W	HXT14	P42833	540 aa		4.6	□□□□□ -1.67
HRT1	YOL133W	GLO2	Q05584	274 aa		4.6	□□□□□ -1.67
HRT1	YOL133W	PHO92	Q06390	306 aa		4.6	□□□□□ -1.67
HRT1	YOL133W	YEH2	Q07950	538 aa		4.6	□□□□□ -1.67
HRT1	YOL133W	CFT2	Q12102	859 aa	Predicted RBP	4.6	□□□□□ -1.67
HRT1	YOL133W	RKM5	Q12367	367 aa		4.6	□□□□□ -1.67
HRT1	YOL133W	YCR022C	P25620	114 aa		4.59	□□□□□ -1.67
HRT1	YOL133W	PAP1	P29468	568 aa	Known RBP	4.59	□□□□□ -1.67
HRT1	YOL133W	ATS1	P31386	333 aa		4.59	□□□□□ -1.67
HRT1	YOL133W	FRE1	P32791	686 aa		4.59	□□□□□ -1.67
HRT1	YOL133W	YGL108C	P53139	140 aa		4.59	□□□□□ -1.67
HRT1	YOL133W	ZPR1	P53303	486 aa	Known RBP	4.59	□□□□□ -1.67
HRT1	YOL133W	RLI1	Q03195	608 aa	Known RBP	4.59	□□□□□ -1.67
HRT1	YOL133W	YDR415C	Q04033	374 aa	Predicted RBP	4.59	□□□□□ -1.67
HRT1	YOL133W	SYF1	Q04048	859 aa	Predicted RBP	4.59	□□□□□ -1.67
HRT1	YOL133W	YMR317W	Q04893	1140 aa		4.59	□□□□□ -1.67
HRT1	YOL133W	GRS2	Q06817	618 aa		4.59	□□□□□ -1.67
HRT1	YOL133W	ISN1	Q99312	450 aa		4.59	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms