RNA–Protein interactions for RNA: YNL024C-A

KSH1, Transcript of Essential protein suggested to function early in the secretory pathway, yeastyeast

Gene KSH1, Length 219 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
KSH1YNL024C-A DSL1P53847 754 aa6.36□□□□□ -1.39
KSH1YNL024C-A IMP4P53941 290 aaKnown RBP6.36□□□□□ -1.39
KSH1YNL024C-A PEX13P80667 386 aa6.36□□□□□ -1.39
KSH1YNL024C-A ECM9Q02202 377 aa6.36□□□□□ -1.39
KSH1YNL024C-A VHS1Q03785 461 aa6.36□□□□□ -1.39
KSH1YNL024C-A SSQ1Q05931 657 aaPredicted RBP6.36□□□□□ -1.39
KSH1YNL024C-A GRS2Q06817 618 aa6.36□□□□□ -1.39
KSH1YNL024C-A YDR056CQ12025 205 aa6.36□□□□□ -1.39
KSH1YNL024C-A YDL176WQ12027 708 aa6.36□□□□□ -1.39
KSH1YNL024C-A PER33Q12144 273 aa6.36□□□□□ -1.39
KSH1YNL024C-A RRP42Q12277 265 aaPredicted RBP6.36□□□□□ -1.39
KSH1YNL024C-A BRR1Q99177 341 aaPredicted RBP6.36□□□□□ -1.39
KSH1YNL024C-A HIS5P07172 385 aa6.35□□□□□ -1.39
KSH1YNL024C-A CPA1P07258 411 aaKnown RBP6.35□□□□□ -1.39
KSH1YNL024C-A MET8P15807 274 aa6.35□□□□□ -1.39
KSH1YNL024C-A TEC1P18412 486 aa6.35□□□□□ -1.39
KSH1YNL024C-A FPR1P20081 114 aaKnown RBP6.35□□□□□ -1.39
KSH1YNL024C-A MSB1P21339 1137 aaKnown RBP6.35□□□□□ -1.39
KSH1YNL024C-A OCA4P25366 362 aa6.35□□□□□ -1.39
KSH1YNL024C-A GBP2P25555 427 aaKnown RBP RIP-Chip data6.35□□□□□ -1.39not detected
KSH1YNL024C-A CCR4P31384 837 aaKnown RBP6.35□□□□□ -1.39
KSH1YNL024C-A PTC1P35182 281 aa6.35□□□□□ -1.39
KSH1YNL024C-A NEM1P38757 446 aa6.35□□□□□ -1.39
KSH1YNL024C-A DOT6P40059 670 aaKnown RBP6.35□□□□□ -1.39
KSH1YNL024C-A OSW5P40219 148 aa6.35□□□□□ -1.39
KSH1YNL024C-A AYR1P40471 297 aa6.35□□□□□ -1.39
KSH1YNL024C-A GTO1P48239 356 aa6.35□□□□□ -1.39
KSH1YNL024C-A ARI1P53111 347 aaKnown RBP6.35□□□□□ -1.39
KSH1YNL024C-A YHM2Q04013 314 aa6.35□□□□□ -1.39
KSH1YNL024C-A YMR111CQ04461 462 aaPredicted RBP6.35□□□□□ -1.39
KSH1YNL024C-A YDR124WQ04608 324 aa6.35□□□□□ -1.39
KSH1YNL024C-A SSL1Q04673 461 aaPredicted RBP6.35□□□□□ -1.39
KSH1YNL024C-A RIF2Q06208 395 aa6.35□□□□□ -1.39
KSH1YNL024C-A PDH1Q12428 516 aaKnown RBP6.35□□□□□ -1.39
KSH1YNL024C-A CAN1P04817 590 aa6.34□□□□□ -1.39
KSH1YNL024C-A STE3P06783 470 aa6.34□□□□□ -1.39
KSH1YNL024C-A LEU1P07264 779 aaKnown RBP6.34□□□□□ -1.39
KSH1YNL024C-A BCY1P07278 416 aaKnown RBP6.34□□□□□ -1.39
KSH1YNL024C-A SWI5P08153 709 aa6.34□□□□□ -1.39
KSH1YNL024C-A YAR066WP0CX18 203 aa6.34□□□□□ -1.39
KSH1YNL024C-A YHR214WP0CX19 203 aa6.34□□□□□ -1.39
KSH1YNL024C-A EPT1P22140 391 aa6.34□□□□□ -1.39
KSH1YNL024C-A VPH2P32341 215 aa6.34□□□□□ -1.39
KSH1YNL024C-A YKR078WP36158 585 aaKnown RBP6.34□□□□□ -1.39
KSH1YNL024C-A YCR087C-AP37263 153 aa6.34□□□□□ -1.39
KSH1YNL024C-A ROT2P38138 954 aa6.34□□□□□ -1.39
KSH1YNL024C-A YHL012WP38709 493 aa6.34□□□□□ -1.39
KSH1YNL024C-A GIC1P38785 314 aa6.34□□□□□ -1.39
KSH1YNL024C-A HPM1P40481 377 aa6.34□□□□□ -1.39
KSH1YNL024C-A IRR1P40541 1150 aa6.34□□□□□ -1.39
KSH1YNL024C-A SNL1P40548 159 aa6.34□□□□□ -1.39
KSH1YNL024C-A ERG10P41338 398 aaKnown RBP6.34□□□□□ -1.39
KSH1YNL024C-A VMA13P41807 478 aaKnown RBP6.34□□□□□ -1.39
KSH1YNL024C-A SEC27P41811 889 aaKnown RBP6.34□□□□□ -1.39
KSH1YNL024C-A MET12P46151 657 aa6.34□□□□□ -1.39
KSH1YNL024C-A MPS2P53159 387 aa6.34□□□□□ -1.39
KSH1YNL024C-A SWC4P53201 476 aa6.34□□□□□ -1.39
KSH1YNL024C-A YGR016WP53209 190 aa6.34□□□□□ -1.39
KSH1YNL024C-A SFB2P53953 876 aa6.34□□□□□ -1.39
KSH1YNL024C-A IDP3P53982 420 aaKnown RBP6.34□□□□□ -1.39
KSH1YNL024C-A EFR3Q03653 782 aaKnown RBP6.34□□□□□ -1.39
KSH1YNL024C-A TMN2Q04562 672 aa6.34□□□□□ -1.39
KSH1YNL024C-A NSE1Q07913 336 aa6.34□□□□□ -1.39
KSH1YNL024C-A MPD2Q99316 277 aa6.34□□□□□ -1.39
KSH1YNL024C-A UBR1P19812 1950 aa6.33□□□□□ -1.4
KSH1YNL024C-A THP2O13539 261 aaKnown RBP6.33□□□□□ -1.4
KSH1YNL024C-A HXK2P04807 486 aaKnown RBP6.33□□□□□ -1.4
KSH1YNL024C-A RPS14AP06367 137 aaKnown RBP6.33□□□□□ -1.4
KSH1YNL024C-A SPS1P08458 490 aa6.33□□□□□ -1.4
KSH1YNL024C-A RPS4AP0CX35 261 aaKnown RBP6.33□□□□□ -1.4
KSH1YNL024C-A RPS4BP0CX36 261 aaKnown RBP6.33□□□□□ -1.4
KSH1YNL024C-A HSF1P10961 833 aa6.33□□□□□ -1.4
KSH1YNL024C-A MSS116P15424 664 aaKnown RBP6.33□□□□□ -1.4
KSH1YNL024C-A GUK1P15454 187 aaKnown RBP6.33□□□□□ -1.4
KSH1YNL024C-A UGA1P17649 471 aa6.33□□□□□ -1.4
KSH1YNL024C-A CCA1P21269 546 aa6.33□□□□□ -1.4
KSH1YNL024C-A MEF1P25039 761 aa6.33□□□□□ -1.4
KSH1YNL024C-A RVS161P25343 265 aaKnown RBP6.33□□□□□ -1.4
KSH1YNL024C-A HCM1P25364 564 aa6.33□□□□□ -1.4
KSH1YNL024C-A RPL5P26321 297 aaKnown RBP6.33□□□□□ -1.4
KSH1YNL024C-A CIN8P27895 1000 aa6.33□□□□□ -1.4
KSH1YNL024C-A MRPL9P31334 269 aa6.33□□□□□ -1.4
KSH1YNL024C-A STE14P32584 239 aa6.33□□□□□ -1.4
KSH1YNL024C-A CBF5P33322 483 aaKnown RBP RIP-Chip data6.33□□□□□ -1.4not detected
KSH1YNL024C-A RPF2P36160 344 aaKnown RBP6.33□□□□□ -1.4
KSH1YNL024C-A BMT2P38278 337 aa6.33□□□□□ -1.4
KSH1YNL024C-A CCT6P39079 546 aa6.33□□□□□ -1.4
KSH1YNL024C-A RPS14BP39516 138 aaKnown RBP6.33□□□□□ -1.4
KSH1YNL024C-A SPF1P39986 1215 aaKnown RBP6.33□□□□□ -1.4
KSH1YNL024C-A AGP3P43548 558 aa6.33□□□□□ -1.4
KSH1YNL024C-A GAT1P43574 510 aa6.33□□□□□ -1.4
KSH1YNL024C-A NUP85P46673 744 aa6.33□□□□□ -1.4
KSH1YNL024C-A SUM1P46676 1062 aa6.33□□□□□ -1.4
KSH1YNL024C-A MDM34P53083 459 aa6.33□□□□□ -1.4
KSH1YNL024C-A GPI1P53306 609 aa6.33□□□□□ -1.4
KSH1YNL024C-A ZRG17P53735 605 aa6.33□□□□□ -1.4
KSH1YNL024C-A YNL095CP53932 642 aa6.33□□□□□ -1.4
KSH1YNL024C-A UGO1Q03327 502 aa6.33□□□□□ -1.4
KSH1YNL024C-A YKU80Q04437 629 aa6.33□□□□□ -1.4
KSH1YNL024C-A NDL1Q06568 189 aa6.33□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms