RNA–Protein interactions for RNA: YML097C

VPS9, Transcript of Guanine nucleotide exchange factor (GEF), yeastyeast

Gene VPS9, Length 1,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS9YML097C MMS4P38257 691 aa3.3□□□□□ -1.88
VPS9YML097C WSS1P38838 269 aa3.3□□□□□ -1.88
VPS9YML097C MBB1P39534 108 aa3.3□□□□□ -1.88
VPS9YML097C SER3P40054 469 aa3.3□□□□□ -1.88
VPS9YML097C YIL060WP40519 144 aa3.3□□□□□ -1.88
VPS9YML097C YJL107CP42947 387 aa3.3□□□□□ -1.88
VPS9YML097C ATG27P46989 271 aa3.3□□□□□ -1.88
VPS9YML097C URB2P47108 1174 aa3.3□□□□□ -1.88
VPS9YML097C COS5P47187 383 aa3.3□□□□□ -1.88
VPS9YML097C MRK1P50873 501 aa3.3□□□□□ -1.88
VPS9YML097C SMM1P53720 384 aaKnown RBP3.3□□□□□ -1.88
VPS9YML097C ASI1P54074 624 aa3.3□□□□□ -1.88
VPS9YML097C CTF4Q01454 927 aa3.3□□□□□ -1.88
VPS9YML097C ACL4Q03771 387 aa3.3□□□□□ -1.88
VPS9YML097C TAP42Q04372 366 aa3.3□□□□□ -1.88
VPS9YML097C YDR341CQ05506 607 aaKnown RBP3.3□□□□□ -1.88
VPS9YML097C BSP1Q06604 576 aa3.3□□□□□ -1.88
VPS9YML097C COS7Q07788 383 aa3.3□□□□□ -1.88
VPS9YML097C YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.3□□□□□ -1.88not detected
VPS9YML097C IRC10Q08118 586 aa3.3□□□□□ -1.88
VPS9YML097C ETT1Q08421 412 aaKnown RBP3.3□□□□□ -1.88
VPS9YML097C YLR278CQ05854 1341 aa3.29□□□□□ -1.88
VPS9YML097C PEP4P07267 405 aaKnown RBP3.29□□□□□ -1.88
VPS9YML097C RPL1AP0CX43 217 aaKnown RBP3.29□□□□□ -1.88
VPS9YML097C RPL1BP0CX44 217 aaKnown RBP3.29□□□□□ -1.88
VPS9YML097C CLN1P20437 546 aa3.29□□□□□ -1.88
VPS9YML097C APD1P38281 316 aa3.29□□□□□ -1.88
VPS9YML097C ARN1P38731 627 aa3.29□□□□□ -1.88
VPS9YML097C KEL1P38853 1164 aaKnown RBP3.29□□□□□ -1.88
VPS9YML097C FAD1P38913 306 aa3.29□□□□□ -1.88
VPS9YML097C PES4P39684 611 aa3.29□□□□□ -1.88
VPS9YML097C ATF1P40353 525 aa3.29□□□□□ -1.88
VPS9YML097C POP1P41812 875 aa3.29□□□□□ -1.88
VPS9YML097C ALK1P43633 760 aaKnown RBP3.29□□□□□ -1.88
VPS9YML097C MDE1P47095 244 aa3.29□□□□□ -1.88
VPS9YML097C LYS20P48570 428 aaKnown RBP3.29□□□□□ -1.88
VPS9YML097C OCA1P50946 238 aaPredicted RBP3.29□□□□□ -1.88
VPS9YML097C ZPR1P53303 486 aaKnown RBP3.29□□□□□ -1.88
VPS9YML097C ATP23P53722 227 aa3.29□□□□□ -1.88
VPS9YML097C KTR5P53966 522 aaPredicted RBP3.29□□□□□ -1.88
VPS9YML097C DCS1Q06151 350 aa3.29□□□□□ -1.88
VPS9YML097C YDL218WQ07629 317 aa3.29□□□□□ -1.88
VPS9YML097C DIS3Q08162 1001 aaKnown RBP3.29□□□□□ -1.88
VPS9YML097C AEP3Q12089 606 aa3.29□□□□□ -1.88
VPS9YML097C VAM3Q12241 283 aa3.29□□□□□ -1.88
VPS9YML097C SUT2Q12286 268 aa3.29□□□□□ -1.88
VPS9YML097C YLR111WQ12528 110 aa3.29□□□□□ -1.88
VPS9YML097C EDE1P34216 1381 aa3.28□□□□□ -1.88
VPS9YML097C TY1B-AO13527 1196 aaKnown RBP3.28□□□□□ -1.88
VPS9YML097C PDE2P06776 526 aa3.28□□□□□ -1.88
VPS9YML097C SPO7P18410 259 aa3.28□□□□□ -1.88
VPS9YML097C PRP2P20095 876 aaPredicted RBP3.28□□□□□ -1.88
VPS9YML097C URE2P23202 354 aaKnown RBP3.28□□□□□ -1.88
VPS9YML097C POT1P27796 417 aaKnown RBP RIP-Chip data3.28□□□□□ -1.88not detected
VPS9YML097C BEM1P29366 551 aa3.28□□□□□ -1.88
VPS9YML097C HOT13P36078 116 aa3.28□□□□□ -1.88
VPS9YML097C YKL023WP36103 277 aaKnown RBP3.28□□□□□ -1.88
VPS9YML097C BNA4P38169 460 aa3.28□□□□□ -1.88
VPS9YML097C VHC1P38329 1120 aa3.28□□□□□ -1.88
VPS9YML097C PAC2P39937 518 aa3.28□□□□□ -1.88
VPS9YML097C YJL132WP47014 750 aa3.28□□□□□ -1.88
VPS9YML097C UBP8P50102 471 aa3.28□□□□□ -1.88
VPS9YML097C BUD32P53323 261 aa3.28□□□□□ -1.88
VPS9YML097C TOF1P53840 1238 aa3.28□□□□□ -1.88
VPS9YML097C OCA2P53949 197 aa3.28□□□□□ -1.88
VPS9YML097C SHR3Q02774 210 aa3.28□□□□□ -1.88
VPS9YML097C UAF30Q08747 228 aa3.28□□□□□ -1.88
VPS9YML097C RHO2P06781 192 aa3.27□□□□□ -1.89
VPS9YML097C DAL5P15365 543 aa3.27□□□□□ -1.89
VPS9YML097C VMA2P16140 517 aaKnown RBP3.27□□□□□ -1.89
VPS9YML097C PHO84P25297 587 aaKnown RBP3.27□□□□□ -1.89
VPS9YML097C SNT1P25357 1226 aa3.27□□□□□ -1.89
VPS9YML097C MCM4P30665 933 aaKnown RBP3.27□□□□□ -1.89
VPS9YML097C HIR2P32480 875 aa3.27□□□□□ -1.89
VPS9YML097C PPZ2P33329 710 aa3.27□□□□□ -1.89
VPS9YML097C SIF2P38262 535 aa3.27□□□□□ -1.89
VPS9YML097C ARP1P38696 384 aa3.27□□□□□ -1.89
VPS9YML097C GND1P38720 489 aaKnown RBP3.27□□□□□ -1.89
VPS9YML097C TIF4631P39935 952 aaKnown RBP3.27□□□□□ -1.89
VPS9YML097C IRC7P43623 340 aa3.27□□□□□ -1.89
VPS9YML097C RPS0BP46654 252 aaKnown RBP3.27□□□□□ -1.89
VPS9YML097C FYV8P46949 817 aaKnown RBP3.27□□□□□ -1.89
VPS9YML097C PYK2P52489 506 aaKnown RBP3.27□□□□□ -1.89
VPS9YML097C RMD9P53140 646 aaKnown RBP3.27□□□□□ -1.89
VPS9YML097C HEF3P53978 1044 aaKnown RBP3.27□□□□□ -1.89
VPS9YML097C PPM1Q04081 328 aa3.27□□□□□ -1.89
VPS9YML097C PIG1Q06216 648 aa3.27□□□□□ -1.89
VPS9YML097C MCP2Q06567 569 aa3.27□□□□□ -1.89
VPS9YML097C MSL5Q12186 476 aaKnown RBP RIP-Chip data3.27□□□□□ -1.89not detected
VPS9YML097C PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.27□□□□□ -1.89not detected
VPS9YML097C YDR061WQ12298 539 aa3.27□□□□□ -1.89
VPS9YML097C MES1P00958 751 aaKnown RBP3.26□□□□□ -1.89
VPS9YML097C RPL6BP05739 176 aaKnown RBP3.26□□□□□ -1.89
VPS9YML097C RAD52P06778 471 aaKnown RBP3.26□□□□□ -1.89
VPS9YML097C CBP1P07252 654 aa3.26□□□□□ -1.89
VPS9YML097C ADY2P25613 283 aa3.26□□□□□ -1.89
VPS9YML097C DAD2P36162 133 aa3.26□□□□□ -1.89
VPS9YML097C ADH5P38113 351 aaKnown RBP3.26□□□□□ -1.89
VPS9YML097C TCM62P38228 572 aaKnown RBP3.26□□□□□ -1.89
VPS9YML097C ZTA1P38230 334 aaKnown RBP3.26□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 7.8 ms