RNA–Protein interactions for RNA: YKL130C

SHE2, Transcript of RNA-binding protein that binds specific mRNAs and interacts with She3p, yeastyeast

Gene SHE2, Length 741 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE2YKL130C MSR1P38714 643 aa2.3□□□□□ -2.04
SHE2YKL130C DBP8P38719 431 aa2.3□□□□□ -2.04
SHE2YKL130C CAJ1P39101 391 aa2.3□□□□□ -2.04
SHE2YKL130C CIN4P39110 191 aa2.3□□□□□ -2.04
SHE2YKL130C ZIM17P42844 174 aa2.3□□□□□ -2.04
SHE2YKL130C YJL055WP47044 245 aa2.3□□□□□ -2.04
SHE2YKL130C MNP1P53163 194 aaPredicted RBP2.3□□□□□ -2.04
SHE2YKL130C BNI5P53890 448 aaKnown RBP2.3□□□□□ -2.04
SHE2YKL130C RPA49Q01080 415 aaPredicted RBP2.3□□□□□ -2.04
SHE2YKL130C KAP120Q02932 1032 aa2.3□□□□□ -2.04
SHE2YKL130C AIM32Q04689 311 aa2.3□□□□□ -2.04
SHE2YKL130C ROY1Q04847 553 aa2.3□□□□□ -2.04
SHE2YKL130C ECI1Q05871 280 aa2.3□□□□□ -2.04
SHE2YKL130C TEN1Q07921 160 aa2.3□□□□□ -2.04
SHE2YKL130C PDH1Q12428 516 aaKnown RBP2.3□□□□□ -2.04
SHE2YKL130C YDL007C-AQ2V2Q0 85 aa2.3□□□□□ -2.04
SHE2YKL130C SPT7P35177 1332 aa2.3□□□□□ -2.04
SHE2YKL130C YML133CQ03099 1374 aa2.3□□□□□ -2.04
SHE2YKL130C YLL067CQ07888 1374 aa2.3□□□□□ -2.04
SHE2YKL130C YLL066CQ99208 1374 aa2.3□□□□□ -2.04
SHE2YKL130C SGS1P35187 1447 aa2.3□□□□□ -2.04
SHE2YKL130C SPA2P23201 1466 aaKnown RBP2.29□□□□□ -2.04
SHE2YKL130C CHO1P08456 276 aa2.29□□□□□ -2.04
SHE2YKL130C RPL3P14126 387 aaKnown RBP2.29□□□□□ -2.04
SHE2YKL130C SUI2P20459 304 aaKnown RBP2.29□□□□□ -2.04
SHE2YKL130C BUD14P27637 709 aa2.29□□□□□ -2.04
SHE2YKL130C TOA1P32773 286 aa2.29□□□□□ -2.04
SHE2YKL130C TFB1P32776 642 aa2.29□□□□□ -2.04
SHE2YKL130C NIP100P33420 868 aa2.29□□□□□ -2.04
SHE2YKL130C MIA40P36046 403 aa2.29□□□□□ -2.04
SHE2YKL130C RPL32P38061 130 aaKnown RBP2.29□□□□□ -2.04
SHE2YKL130C RXT2P38255 430 aa2.29□□□□□ -2.04
SHE2YKL130C CDC1P40986 491 aa2.29□□□□□ -2.04
SHE2YKL130C CAK1P43568 368 aaPredicted RBP2.29□□□□□ -2.04
SHE2YKL130C ESBP6P53918 673 aa2.29□□□□□ -2.04
SHE2YKL130C IMP4P53941 290 aaKnown RBP2.29□□□□□ -2.04
SHE2YKL130C TOF2Q02208 771 aa2.29□□□□□ -2.04
SHE2YKL130C OAZ1Q02803 292 aa2.29□□□□□ -2.04
SHE2YKL130C PDS5Q04264 1277 aa2.29□□□□□ -2.04
SHE2YKL130C RPC11Q04307 110 aaPredicted RBP2.29□□□□□ -2.04
SHE2YKL130C GYL1Q04322 720 aa2.29□□□□□ -2.04
SHE2YKL130C SMA2Q04658 369 aa2.29□□□□□ -2.04
SHE2YKL130C SOV1Q04748 898 aa2.29□□□□□ -2.04
SHE2YKL130C DON1Q05610 365 aa2.29□□□□□ -2.04
SHE2YKL130C PIG1Q06216 648 aa2.29□□□□□ -2.04
SHE2YKL130C ECM30Q06673 1274 aa2.29□□□□□ -2.04
SHE2YKL130C RTT109Q07794 436 aa2.29□□□□□ -2.04
SHE2YKL130C APL5Q08951 932 aaKnown RBP2.29□□□□□ -2.04
SHE2YKL130C PAR32Q12515 295 aaKnown RBP2.29□□□□□ -2.04
SHE2YKL130C AFI1Q99222 893 aa2.29□□□□□ -2.04
SHE2YKL130C PUT2P07275 575 aa2.28□□□□□ -2.04
SHE2YKL130C GPA1P08539 472 aa2.28□□□□□ -2.04
SHE2YKL130C RPL31BP0C2H9 113 aaKnown RBP2.28□□□□□ -2.04
SHE2YKL130C APE1P14904 514 aa2.28□□□□□ -2.04
SHE2YKL130C CDC23P16522 626 aa2.28□□□□□ -2.04
SHE2YKL130C CLB2P24869 491 aa2.28□□□□□ -2.04
SHE2YKL130C PUP2P32379 260 aa2.28□□□□□ -2.04
SHE2YKL130C HXT3P32466 567 aaKnown RBP2.28□□□□□ -2.04
SHE2YKL130C ANP1P32629 500 aa2.28□□□□□ -2.04
SHE2YKL130C YME2P32843 850 aa2.28□□□□□ -2.04
SHE2YKL130C NTC20P38302 140 aaPredicted RBP2.28□□□□□ -2.04
SHE2YKL130C SEC28P40509 296 aaKnown RBP2.28□□□□□ -2.04
SHE2YKL130C LCB2P40970 561 aa2.28□□□□□ -2.04
SHE2YKL130C ALK1P43633 760 aaKnown RBP2.28□□□□□ -2.04
SHE2YKL130C FMS1P50264 508 aa2.28□□□□□ -2.04
SHE2YKL130C ATP22P50273 684 aaPredicted RBP2.28□□□□□ -2.04
SHE2YKL130C CUL3P53202 744 aa2.28□□□□□ -2.04
SHE2YKL130C YGR016WP53209 190 aa2.28□□□□□ -2.04
SHE2YKL130C YGR126WP53274 230 aa2.28□□□□□ -2.04
SHE2YKL130C RSM23Q01163 450 aa2.28□□□□□ -2.04
SHE2YKL130C PEX25Q02969 394 aa2.28□□□□□ -2.04
SHE2YKL130C ARX1Q03862 593 aaKnown RBP2.28□□□□□ -2.04
SHE2YKL130C CAC2Q04199 468 aa2.28□□□□□ -2.04
SHE2YKL130C SWF1Q04629 336 aa2.28□□□□□ -2.04
SHE2YKL130C YMR254CQ04838 102 aa2.28□□□□□ -2.04
SHE2YKL130C RRP45Q05636 305 aaKnown RBP2.28□□□□□ -2.04
SHE2YKL130C RBS1Q05672 457 aaKnown RBP2.28□□□□□ -2.04
SHE2YKL130C FMP45Q07651 309 aa2.28□□□□□ -2.04
SHE2YKL130C YOL159CQ08300 171 aa2.28□□□□□ -2.04
SHE2YKL130C FRE3Q08905 711 aa2.28□□□□□ -2.04
SHE2YKL130C BRR1Q99177 341 aaPredicted RBP2.28□□□□□ -2.04
SHE2YKL130C CBP1P07252 654 aa2.27□□□□□ -2.05
SHE2YKL130C SPS4P09937 338 aa2.27□□□□□ -2.05
SHE2YKL130C YML002WP0CF17 737 aa2.27□□□□□ -2.05
SHE2YKL130C NAT1P12945 854 aaKnown RBP2.27□□□□□ -2.05
SHE2YKL130C SRV2P17555 526 aaKnown RBP2.27□□□□□ -2.05
SHE2YKL130C HNM1P19807 563 aa2.27□□□□□ -2.05
SHE2YKL130C PRP2P20095 876 aaPredicted RBP2.27□□□□□ -2.05
SHE2YKL130C ERV1P27882 189 aa2.27□□□□□ -2.05
SHE2YKL130C GAC1P28006 793 aa2.27□□□□□ -2.05
SHE2YKL130C IDH2P28241 369 aaKnown RBP2.27□□□□□ -2.05
SHE2YKL130C RAD14P28519 371 aa2.27□□□□□ -2.05
SHE2YKL130C RPN2P32565 945 aaKnown RBP2.27□□□□□ -2.05
SHE2YKL130C RML2P32611 393 aa2.27□□□□□ -2.05
SHE2YKL130C RPS0AP32905 252 aaKnown RBP2.27□□□□□ -2.05
SHE2YKL130C TUL1P36096 758 aa2.27□□□□□ -2.05
SHE2YKL130C PIM1P36775 1133 aa2.27□□□□□ -2.05
SHE2YKL130C ANS1P38832 159 aa2.27□□□□□ -2.05
SHE2YKL130C URB2P47108 1174 aa2.27□□□□□ -2.05
SHE2YKL130C TCB2P48231 1178 aa2.27□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms