RNA–Protein interactions for RNA: YGR134W

CAF130, Transcript of Subunit of the CCR4-NOT transcriptional regulatory complex, yeastyeast

Gene CAF130, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF130YGR134W EMC1P25574 760 aa3.54□□□□□ -1.84
CAF130YGR134W RTR1P40084 226 aaPredicted RBP3.54□□□□□ -1.84
CAF130YGR134W YIL108WP40483 696 aaKnown RBP3.54□□□□□ -1.84
CAF130YGR134W RDR1Q08904 546 aa3.54□□□□□ -1.84
CAF130YGR134W YVC1Q12324 675 aa3.54□□□□□ -1.84
CAF130YGR134W AIM45Q12480 344 aaKnown RBP3.54□□□□□ -1.84
CAF130YGR134W PET111P08468 800 aa3.53□□□□□ -1.84
CAF130YGR134W PUP3P25451 205 aaKnown RBP3.53□□□□□ -1.84
CAF130YGR134W YIM1P28625 365 aa3.53□□□□□ -1.84
CAF130YGR134W ARO9P38840 513 aaPredicted RBP3.53□□□□□ -1.84
CAF130YGR134W PEX7P39108 375 aa3.53□□□□□ -1.84
CAF130YGR134W UBP9P39967 754 aa3.53□□□□□ -1.84
CAF130YGR134W NET1P47035 1189 aa3.53□□□□□ -1.84
CAF130YGR134W MSY1P48527 492 aa3.53□□□□□ -1.84
CAF130YGR134W IMD4P50094 524 aaKnown RBP3.53□□□□□ -1.84
CAF130YGR134W NCS6P53088 359 aa3.53□□□□□ -1.84
CAF130YGR134W COP1P53622 1201 aaKnown RBP3.53□□□□□ -1.84
CAF130YGR134W INP2Q03824 705 aa3.53□□□□□ -1.84
CAF130YGR134W YMR111CQ04461 462 aaPredicted RBP3.53□□□□□ -1.84
CAF130YGR134W MDM36Q06820 579 aa3.53□□□□□ -1.84
CAF130YGR134W YDL007C-AQ2V2Q0 85 aa3.53□□□□□ -1.84
CAF130YGR134W NBL1Q3E7Y6 73 aa3.53□□□□□ -1.84
CAF130YGR134W ADE5,7P07244 802 aaKnown RBP3.53□□□□□ -1.84
CAF130YGR134W RFA1P22336 621 aaKnown RBP3.53□□□□□ -1.84
CAF130YGR134W PET18P25362 215 aa3.53□□□□□ -1.84
CAF130YGR134W ERG1P32476 496 aaKnown RBP3.53□□□□□ -1.84
CAF130YGR134W ZTA1P38230 334 aaKnown RBP3.53□□□□□ -1.84
CAF130YGR134W MSR1P38714 643 aa3.53□□□□□ -1.84
CAF130YGR134W YER085CP40058 173 aa3.53□□□□□ -1.84
CAF130YGR134W YIL089WP40500 205 aa3.53□□□□□ -1.84
CAF130YGR134W DOT5P40553 215 aa3.53□□□□□ -1.84
CAF130YGR134W COS5P47187 383 aa3.53□□□□□ -1.84
CAF130YGR134W DIA3P52290 468 aa3.53□□□□□ -1.84
CAF130YGR134W MRI1Q06489 411 aaKnown RBP3.53□□□□□ -1.84
CAF130YGR134W COS7Q07788 383 aa3.53□□□□□ -1.84
CAF130YGR134W FMP40Q08968 688 aaPredicted RBP3.53□□□□□ -1.84
CAF130YGR134W POM34Q12445 299 aa3.53□□□□□ -1.84
CAF130YGR134W YBR255C-AQ3E776 120 aa3.53□□□□□ -1.84
CAF130YGR134W PDC5P16467 563 aaKnown RBP3.52□□□□□ -1.85
CAF130YGR134W MGR1P25573 417 aa3.52□□□□□ -1.85
CAF130YGR134W PTC6P25646 442 aa3.52□□□□□ -1.85
CAF130YGR134W PTK1P36002 662 aaPredicted RBP3.52□□□□□ -1.85
CAF130YGR134W IML3P38265 245 aa3.52□□□□□ -1.85
CAF130YGR134W YHR078WP38799 552 aa3.52□□□□□ -1.85
CAF130YGR134W GTS1P40956 396 aa3.52□□□□□ -1.85
CAF130YGR134W ZAP1P47043 880 aa3.52□□□□□ -1.85
CAF130YGR134W YGR012WP53206 393 aa3.52□□□□□ -1.85
CAF130YGR134W BUD9P53226 547 aa3.52□□□□□ -1.85
CAF130YGR134W TEX1P53851 422 aaKnown RBP3.52□□□□□ -1.85
CAF130YGR134W PPM1Q04081 328 aa3.52□□□□□ -1.85
CAF130YGR134W COQ9Q05779 260 aa3.52□□□□□ -1.85
CAF130YGR134W YLR297WQ05899 129 aa3.52□□□□□ -1.85
CAF130YGR134W SLK19Q08581 821 aaKnown RBP3.52□□□□□ -1.85
CAF130YGR134W PMA1P05030 918 aaKnown RBP3.52□□□□□ -1.85
CAF130YGR134W EST1P17214 699 aaPredicted RBP3.52□□□□□ -1.85
CAF130YGR134W SEC15P22224 910 aa3.52□□□□□ -1.85
CAF130YGR134W ZIP1P31111 875 aa3.52□□□□□ -1.85
CAF130YGR134W GLG1P36143 616 aa3.52□□□□□ -1.85
CAF130YGR134W YHR210CP38893 341 aa3.52□□□□□ -1.85
CAF130YGR134W MRK1P50873 501 aa3.52□□□□□ -1.85
CAF130YGR134W YLR173WQ06247 608 aa3.52□□□□□ -1.85
CAF130YGR134W ATG23Q06671 453 aa3.52□□□□□ -1.85
CAF130YGR134W TLG2Q08144 397 aa3.52□□□□□ -1.85
CAF130YGR134W PUS9Q12069 462 aa3.52□□□□□ -1.85
CAF130YGR134W AAC1P04710 309 aa3.52□□□□□ -1.85
CAF130YGR134W GAL7P08431 366 aa3.52□□□□□ -1.85
CAF130YGR134W GAL3P13045 520 aa3.52□□□□□ -1.85
CAF130YGR134W YIH1P25637 258 aa3.52□□□□□ -1.85
CAF130YGR134W YBL055CP34220 418 aaPredicted RBP3.52□□□□□ -1.85
CAF130YGR134W REG2P38232 338 aa3.52□□□□□ -1.85
CAF130YGR134W CBR1P38626 284 aaKnown RBP3.52□□□□□ -1.85
CAF130YGR134W SAK1P38990 1142 aa3.52□□□□□ -1.85
CAF130YGR134W RPS10BP46784 105 aaKnown RBP3.52□□□□□ -1.85
CAF130YGR134W EFM5P53200 248 aaKnown RBP3.52□□□□□ -1.85
CAF130YGR134W MAP1Q01662 387 aaKnown RBP RIP-Chip data3.52□□□□□ -1.85not detected
CAF130YGR134W REC102Q02721 264 aa3.52□□□□□ -1.85
CAF130YGR134W MRPL1Q04599 285 aa3.52□□□□□ -1.85
CAF130YGR134W COX2P00410 251 aa3.51□□□□□ -1.85
CAF130YGR134W UGA1P17649 471 aa3.51□□□□□ -1.85
CAF130YGR134W GRR1P24814 1151 aa3.51□□□□□ -1.85
CAF130YGR134W DAL2P25335 343 aa3.51□□□□□ -1.85
CAF130YGR134W SHQ1P40486 507 aaPredicted RBP3.51□□□□□ -1.85
CAF130YGR134W YGR149WP48236 432 aa3.51□□□□□ -1.85
CAF130YGR134W YNL134CP53912 376 aaKnown RBP3.51□□□□□ -1.85
CAF130YGR134W UBP2Q01476 1272 aa3.51□□□□□ -1.85
CAF130YGR134W SKI8Q02793 397 aaPredicted RBP3.51□□□□□ -1.85
CAF130YGR134W MTG1Q03151 367 aaPredicted RBP3.51□□□□□ -1.85
CAF130YGR134W SNT309Q06091 175 aaPredicted RBP3.51□□□□□ -1.85
CAF130YGR134W YLR455WQ06188 304 aa3.51□□□□□ -1.85
CAF130YGR134W YPR196WQ06595 470 aa3.51□□□□□ -1.85
CAF130YGR134W FRE3Q08905 711 aa3.51□□□□□ -1.85
CAF130YGR134W OSW2Q12202 724 aa3.51□□□□□ -1.85
CAF130YGR134W GIS3Q12418 502 aa3.51□□□□□ -1.85
CAF130YGR134W APC1P53886 1748 aa3.51□□□□□ -1.85
CAF130YGR134W SSA3P09435 649 aaKnown RBP3.51□□□□□ -1.85
CAF130YGR134W VPS3P23643 1011 aa3.51□□□□□ -1.85
CAF130YGR134W SKI2P35207 1287 aaKnown RBP RIP-Chip data3.51□□□□□ -1.85not detected
CAF130YGR134W TUL1P36096 758 aa3.51□□□□□ -1.85
CAF130YGR134W ULP2P40537 1034 aaPredicted RBP3.51□□□□□ -1.85
CAF130YGR134W OPT1P40897 799 aa3.51□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 34 ms