RNA–Protein interactions for RNA: YGL248W

PDE1, Transcript of Low-affinity cyclic AMP phosphodiesterase, yeastyeast

Gene PDE1, Length 1,110 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDE1YGL248W LIF1P53150 421 aa5.26□□□□□ -1.57
PDE1YGL248W COP1P53622 1201 aaKnown RBP5.26□□□□□ -1.57
PDE1YGL248W YNL181WP53878 407 aa5.26□□□□□ -1.57
PDE1YGL248W SAM50P53969 484 aa5.26□□□□□ -1.57
PDE1YGL248W ARP4P80428 489 aa5.26□□□□□ -1.57
PDE1YGL248W YML037CQ03703 340 aa5.26□□□□□ -1.57
PDE1YGL248W VPS64Q03944 604 aa5.26□□□□□ -1.57
PDE1YGL248W BUD22Q04347 519 aaKnown RBP5.26□□□□□ -1.57
PDE1YGL248W APC4Q04601 652 aa5.26□□□□□ -1.57
PDE1YGL248W TMA16Q08687 178 aa5.26□□□□□ -1.57
PDE1YGL248W BUD7Q08754 746 aa5.26□□□□□ -1.57
PDE1YGL248W SRO7Q12038 1033 aa5.26□□□□□ -1.57
PDE1YGL248W SPE4Q12455 300 aa5.26□□□□□ -1.57
PDE1YGL248W SOD2P00447 233 aa5.25□□□□□ -1.57
PDE1YGL248W PRC1P00729 532 aa5.25□□□□□ -1.57
PDE1YGL248W GAL80P04387 435 aa5.25□□□□□ -1.57
PDE1YGL248W TCP1P12612 559 aaKnown RBP5.25□□□□□ -1.57
PDE1YGL248W SAR1P20606 190 aaKnown RBP5.25□□□□□ -1.57
PDE1YGL248W MEK1P24719 497 aaPredicted RBP5.25□□□□□ -1.57
PDE1YGL248W YCR061WP25639 631 aa5.25□□□□□ -1.57
PDE1YGL248W RML2P32611 393 aa5.25□□□□□ -1.57
PDE1YGL248W YME1P32795 747 aa5.25□□□□□ -1.57
PDE1YGL248W AIM26P32858 118 aa5.25□□□□□ -1.57
PDE1YGL248W TOD6P34219 525 aa5.25□□□□□ -1.57
PDE1YGL248W MRPL10P36520 322 aa5.25□□□□□ -1.57
PDE1YGL248W YHR033WP38690 423 aa5.25□□□□□ -1.57
PDE1YGL248W RCY1P39531 840 aa5.25□□□□□ -1.57
PDE1YGL248W SGN1P40561 250 aaKnown RBP RIP-Chip data5.25□□□□□ -1.57not detected
PDE1YGL248W GSM1P42950 618 aa5.25□□□□□ -1.57
PDE1YGL248W PET130P47065 347 aa5.25□□□□□ -1.57
PDE1YGL248W SSU72P53538 206 aaPredicted RBP5.25□□□□□ -1.57
PDE1YGL248W SNO2P53823 222 aa5.25□□□□□ -1.57
PDE1YGL248W UTP6Q02354 440 aaKnown RBP5.25□□□□□ -1.57
PDE1YGL248W YPL108WQ02872 168 aaPredicted RBP5.25□□□□□ -1.57
PDE1YGL248W URH1Q04179 340 aa5.25□□□□□ -1.57
PDE1YGL248W YPS7Q06325 596 aa5.25□□□□□ -1.57
PDE1YGL248W YPR196WQ06595 470 aa5.25□□□□□ -1.57
PDE1YGL248W CMS1Q07897 291 aaKnown RBP5.25□□□□□ -1.57
PDE1YGL248W XYL2Q07993 356 aa5.25□□□□□ -1.57
PDE1YGL248W NRT1Q08485 598 aa5.25□□□□□ -1.57
PDE1YGL248W BTS1Q12051 335 aa5.25□□□□□ -1.57
PDE1YGL248W SUL2Q12325 893 aa5.25□□□□□ -1.57
PDE1YGL248W VCX1Q99385 411 aa5.25□□□□□ -1.57
PDE1YGL248W RAD7P06779 565 aa5.24□□□□□ -1.57
PDE1YGL248W CMK2P22517 447 aa5.24□□□□□ -1.57
PDE1YGL248W PEX1P24004 1043 aa5.24□□□□□ -1.57
PDE1YGL248W ATP7P30902 174 aa5.24□□□□□ -1.57
PDE1YGL248W SEC66P33754 206 aa5.24□□□□□ -1.57
PDE1YGL248W THI2P38141 450 aa5.24□□□□□ -1.57
PDE1YGL248W RTT107P38850 1070 aa5.24□□□□□ -1.57
PDE1YGL248W SER3P40054 469 aa5.24□□□□□ -1.57
PDE1YGL248W VFA1P40080 203 aa5.24□□□□□ -1.57
PDE1YGL248W RFC4P40339 323 aaKnown RBP5.24□□□□□ -1.57
PDE1YGL248W CEP3P40969 608 aa5.24□□□□□ -1.57
PDE1YGL248W NMD5P46970 1048 aa5.24□□□□□ -1.57
PDE1YGL248W TAH11P47112 604 aa5.24□□□□□ -1.57
PDE1YGL248W YGR149WP48236 432 aa5.24□□□□□ -1.57
PDE1YGL248W KAP114P53067 1004 aa5.24□□□□□ -1.57
PDE1YGL248W YGL185CP53100 379 aa5.24□□□□□ -1.57
PDE1YGL248W VOA1P53262 265 aa5.24□□□□□ -1.57
PDE1YGL248W ZPR1P53303 486 aaKnown RBP5.24□□□□□ -1.57
PDE1YGL248W BOP3P53958 396 aa5.24□□□□□ -1.57
PDE1YGL248W SKO1Q02100 647 aa5.24□□□□□ -1.57
PDE1YGL248W GFD1Q04839 188 aaKnown RBP5.24□□□□□ -1.57
PDE1YGL248W YMR226CQ05016 267 aaKnown RBP5.24□□□□□ -1.57
PDE1YGL248W ADY4Q05955 493 aa5.24□□□□□ -1.57
PDE1YGL248W GMC2Q06201 188 aa5.24□□□□□ -1.57
PDE1YGL248W STP4Q07351 490 aa5.24□□□□□ -1.57
PDE1YGL248W SMC5Q08204 1093 aa5.24□□□□□ -1.57
PDE1YGL248W DCP1Q12517 231 aaPredicted RBP5.24□□□□□ -1.57
PDE1YGL248W RPS13P05756 151 aaKnown RBP5.23□□□□□ -1.57
PDE1YGL248W MET3P08536 511 aa5.23□□□□□ -1.57
PDE1YGL248W RNR2P09938 399 aaKnown RBP5.23□□□□□ -1.57
PDE1YGL248W NHP6BP11633 99 aaKnown RBP5.23□□□□□ -1.57
PDE1YGL248W PEP5P12868 1029 aa5.23□□□□□ -1.57
PDE1YGL248W GAL3P13045 520 aa5.23□□□□□ -1.57
PDE1YGL248W SPO7P18410 259 aa5.23□□□□□ -1.57
PDE1YGL248W COQ1P18900 473 aa5.23□□□□□ -1.57
PDE1YGL248W APA2P22108 325 aa5.23□□□□□ -1.57
PDE1YGL248W ARG1P22768 420 aa5.23□□□□□ -1.57
PDE1YGL248W YIH1P25637 258 aa5.23□□□□□ -1.57
PDE1YGL248W SIP1P32578 815 aa5.23□□□□□ -1.57
PDE1YGL248W SSE2P32590 693 aaKnown RBP5.23□□□□□ -1.57
PDE1YGL248W UBC6P33296 250 aaPredicted RBP5.23□□□□□ -1.57
PDE1YGL248W APT2P36973 181 aa5.23□□□□□ -1.57
PDE1YGL248W SWC5P38326 303 aa5.23□□□□□ -1.57
PDE1YGL248W QNS1P38795 714 aaKnown RBP5.23□□□□□ -1.57
PDE1YGL248W FKH2P41813 862 aa5.23□□□□□ -1.57
PDE1YGL248W YJL045WP47052 634 aa5.23□□□□□ -1.57
PDE1YGL248W TMA22P47089 198 aaPredicted RBP5.23□□□□□ -1.57
PDE1YGL248W CTR1P49573 406 aa5.23□□□□□ -1.57
PDE1YGL248W DIP5P53388 608 aa5.23□□□□□ -1.57
PDE1YGL248W RNT1Q02555 471 aa5.23□□□□□ -1.57
PDE1YGL248W INA17Q02888 182 aa5.23□□□□□ -1.57
PDE1YGL248W ACL4Q03771 387 aa5.23□□□□□ -1.57
PDE1YGL248W YDR179W-AQ03983 463 aa5.23□□□□□ -1.57
PDE1YGL248W PDS5Q04264 1277 aa5.23□□□□□ -1.57
PDE1YGL248W SMA2Q04658 369 aa5.23□□□□□ -1.57
PDE1YGL248W NDL1Q06568 189 aa5.23□□□□□ -1.57
PDE1YGL248W RDR1Q08904 546 aa5.23□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 23.5 ms