RNA–Protein interactions for RNA: YGL007W

BRP1, Transcript of Dubious ORF located in the upstream region of PMA1, yeastyeast

Gene BRP1, Length 378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRP1YGL007W GLG2P47011 380 aa2.17□□□□□ -2.06
BRP1YGL007W TCB2P48231 1178 aa2.17□□□□□ -2.06
BRP1YGL007W MTR3P48240 250 aaPredicted RBP2.17□□□□□ -2.06
BRP1YGL007W EMC4P53073 190 aa2.17□□□□□ -2.06
BRP1YGL007W BTN2P53286 410 aa2.17□□□□□ -2.06
BRP1YGL007W YTP1P53584 459 aa2.17□□□□□ -2.06
BRP1YGL007W ESF2P53743 316 aaKnown RBP2.17□□□□□ -2.06
BRP1YGL007W YNL040WP53960 456 aaPredicted RBP2.17□□□□□ -2.06
BRP1YGL007W BET4Q00618 327 aa2.17□□□□□ -2.06
BRP1YGL007W MRPL13Q02204 264 aa2.17□□□□□ -2.06
BRP1YGL007W INA17Q02888 182 aa2.17□□□□□ -2.06
BRP1YGL007W RPC11Q04307 110 aaPredicted RBP2.17□□□□□ -2.06
BRP1YGL007W YMR018WQ04364 514 aa2.17□□□□□ -2.06
BRP1YGL007W SOV1Q04748 898 aa2.17□□□□□ -2.06
BRP1YGL007W IVY1Q04934 453 aa2.17□□□□□ -2.06
BRP1YGL007W COQ11Q05892 277 aa2.17□□□□□ -2.06
BRP1YGL007W THI7Q05998 598 aa2.17□□□□□ -2.06
BRP1YGL007W TSR2Q06672 205 aaKnown RBP2.17□□□□□ -2.06
BRP1YGL007W VPS36Q06696 566 aa2.17□□□□□ -2.06
BRP1YGL007W SWC7Q06707 132 aa2.17□□□□□ -2.06
BRP1YGL007W OPY2Q06810 360 aa2.17□□□□□ -2.06
BRP1YGL007W APL5Q08951 932 aaKnown RBP2.17□□□□□ -2.06
BRP1YGL007W APL4Q12028 832 aa2.17□□□□□ -2.06
BRP1YGL007W MSL5Q12186 476 aaKnown RBP RIP-Chip data2.17□□□□□ -2.06not detected
BRP1YGL007W DBP10Q12389 995 aaKnown RBP2.17□□□□□ -2.06
BRP1YGL007W OCA6Q12454 224 aa2.17□□□□□ -2.06
BRP1YGL007W YOR338WQ99326 363 aa2.17□□□□□ -2.06
BRP1YGL007W COX5AP00424 153 aa2.16□□□□□ -2.06
BRP1YGL007W TRP4P07285 380 aaPredicted RBP2.16□□□□□ -2.06
BRP1YGL007W ALG7P07286 448 aa2.16□□□□□ -2.06
BRP1YGL007W TUB3P09734 445 aaKnown RBP2.16□□□□□ -2.06
BRP1YGL007W HOM3P10869 527 aa2.16□□□□□ -2.06
BRP1YGL007W GUK1P15454 187 aaKnown RBP2.16□□□□□ -2.06
BRP1YGL007W MNE1P24720 663 aa2.16□□□□□ -2.06
BRP1YGL007W RAD57P25301 460 aa2.16□□□□□ -2.06
BRP1YGL007W CIN8P27895 1000 aa2.16□□□□□ -2.06
BRP1YGL007W DBF4P32325 704 aa2.16□□□□□ -2.06
BRP1YGL007W STE14P32584 239 aa2.16□□□□□ -2.06
BRP1YGL007W MTC7P32633 139 aa2.16□□□□□ -2.06
BRP1YGL007W YPT7P32939 208 aa2.16□□□□□ -2.06
BRP1YGL007W SLC1P33333 303 aa2.16□□□□□ -2.06
BRP1YGL007W YBL055CP34220 418 aaPredicted RBP2.16□□□□□ -2.06
BRP1YGL007W PHO11P35842 467 aa2.16□□□□□ -2.06
BRP1YGL007W SET3P36124 751 aa2.16□□□□□ -2.06
BRP1YGL007W RRT2P38332 387 aa2.16□□□□□ -2.06
BRP1YGL007W HIS2P38635 335 aa2.16□□□□□ -2.06
BRP1YGL007W YHR033WP38690 423 aa2.16□□□□□ -2.06
BRP1YGL007W PHO12P38693 467 aa2.16□□□□□ -2.06
BRP1YGL007W TCD1P38756 429 aa2.16□□□□□ -2.06
BRP1YGL007W PPE1P38796 400 aa2.16□□□□□ -2.06
BRP1YGL007W CTF8P38877 133 aa2.16□□□□□ -2.06
BRP1YGL007W FLC2P39719 783 aa2.16□□□□□ -2.06
BRP1YGL007W PZF1P39933 429 aa2.16□□□□□ -2.06
BRP1YGL007W TIF34P40217 347 aaKnown RBP2.16□□□□□ -2.06
BRP1YGL007W ARG2P40360 574 aa2.16□□□□□ -2.06
BRP1YGL007W PAN6P40459 309 aa2.16□□□□□ -2.06
BRP1YGL007W SDP1P40479 209 aa2.16□□□□□ -2.06
BRP1YGL007W VHR1P40522 640 aa2.16□□□□□ -2.06
BRP1YGL007W BUD8P41698 603 aa2.16□□□□□ -2.06
BRP1YGL007W PFA3P42836 336 aa2.16□□□□□ -2.06
BRP1YGL007W RPS10BP46784 105 aaKnown RBP2.16□□□□□ -2.06
BRP1YGL007W BUD13P46947 266 aaPredicted RBP2.16□□□□□ -2.06
BRP1YGL007W YJL132WP47014 750 aa2.16□□□□□ -2.06
BRP1YGL007W BRO1P48582 844 aa2.16□□□□□ -2.06
BRP1YGL007W COQ5P49017 307 aa2.16□□□□□ -2.06
BRP1YGL007W MNT2P53059 558 aa2.16□□□□□ -2.06
BRP1YGL007W STR3P53101 465 aaKnown RBP2.16□□□□□ -2.06
BRP1YGL007W IMO32P53219 342 aa2.16□□□□□ -2.06
BRP1YGL007W YGR127WP53275 312 aa2.16□□□□□ -2.06
BRP1YGL007W YNR071CP53757 342 aa2.16□□□□□ -2.06
BRP1YGL007W YNL247WP53852 767 aaKnown RBP2.16□□□□□ -2.06
BRP1YGL007W ALF1P53904 254 aa2.16□□□□□ -2.06
BRP1YGL007W YAT1P80235 687 aa2.16□□□□□ -2.06
BRP1YGL007W YPL113CQ02961 396 aa2.16□□□□□ -2.06
BRP1YGL007W DIG1Q03063 452 aaKnown RBP2.16□□□□□ -2.06
BRP1YGL007W UFO1Q04511 668 aa2.16□□□□□ -2.06
BRP1YGL007W ARP9Q05123 467 aa2.16□□□□□ -2.06
BRP1YGL007W HBT1Q07653 1046 aaKnown RBP2.16□□□□□ -2.06
BRP1YGL007W CMS1Q07897 291 aaKnown RBP2.16□□□□□ -2.06
BRP1YGL007W RPS10AQ08745 105 aaPredicted RBP2.16□□□□□ -2.06
BRP1YGL007W SRO7Q12038 1033 aa2.16□□□□□ -2.06
BRP1YGL007W UPC2Q12151 913 aa2.16□□□□□ -2.06
BRP1YGL007W YDR018CQ12185 396 aa2.16□□□□□ -2.06
BRP1YGL007W AVL9Q12500 764 aa2.16□□□□□ -2.06
BRP1YGL007W YNL162W-AQ3E7A8 72 aa2.16□□□□□ -2.06
BRP1YGL007W NAG1Q8TGN9 163 aa2.16□□□□□ -2.06
BRP1YGL007W AFI1Q99222 893 aa2.16□□□□□ -2.06
BRP1YGL007W CSF1Q12150 2958 aa2.16□□□□□ -2.06
BRP1YGL007W YLR462WO13556 202 aa2.15□□□□□ -2.07
BRP1YGL007W COX3P00420 269 aa2.15□□□□□ -2.07
BRP1YGL007W SUC2P00724 532 aa2.15□□□□□ -2.07
BRP1YGL007W URA3P03962 267 aa2.15□□□□□ -2.07
BRP1YGL007W MTF2P10849 440 aa2.15□□□□□ -2.07
BRP1YGL007W SCH9P11792 824 aaKnown RBP2.15□□□□□ -2.07
BRP1YGL007W FRS1P15624 595 aaKnown RBP2.15□□□□□ -2.07
BRP1YGL007W MET8P15807 274 aa2.15□□□□□ -2.07
BRP1YGL007W ACO1P19414 778 aaKnown RBP RIP-Chip data2.15□□□□□ -2.07not detected
BRP1YGL007W SLY1P22213 666 aa2.15□□□□□ -2.07
BRP1YGL007W YCL049CP25577 312 aa2.15□□□□□ -2.07
BRP1YGL007W BRF1P29056 596 aa2.15□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 40.9 ms