RNA–Protein interactions for RNA: YFR050C

PRE4, Transcript of Beta 7 subunit of the 20S proteasome, yeastyeast

Gene PRE4, Length 801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE4YFR050C YHR210CP38893 341 aa2.26□□□□□ -2.05
PRE4YFR050C SCS2P40075 244 aaKnown RBP2.26□□□□□ -2.05
PRE4YFR050C LAS21P40367 830 aa2.26□□□□□ -2.05
PRE4YFR050C MAD2P40958 196 aa2.26□□□□□ -2.05
PRE4YFR050C COG2P53271 262 aa2.26□□□□□ -2.05
PRE4YFR050C ERG13P54839 491 aaKnown RBP2.26□□□□□ -2.05
PRE4YFR050C MDM30Q05930 598 aa2.26□□□□□ -2.05
PRE4YFR050C NDD1Q08887 554 aa2.26□□□□□ -2.05
PRE4YFR050C YDR018CQ12185 396 aa2.26□□□□□ -2.05
PRE4YFR050C ICT1Q12385 394 aa2.26□□□□□ -2.05
PRE4YFR050C YER175W-AQ8TGU4 54 aa2.26□□□□□ -2.05
PRE4YFR050C VAS1P07806 1104 aaKnown RBP2.25□□□□□ -2.05
PRE4YFR050C OM45P16547 393 aa2.25□□□□□ -2.05
PRE4YFR050C CLC1P17891 233 aa2.25□□□□□ -2.05
PRE4YFR050C GSY2P27472 705 aa2.25□□□□□ -2.05
PRE4YFR050C TKL2P33315 681 aa2.25□□□□□ -2.05
PRE4YFR050C MAL32P38158 584 aa2.25□□□□□ -2.05
PRE4YFR050C YEL057CP39983 233 aa2.25□□□□□ -2.05
PRE4YFR050C TDA10P42938 290 aa2.25□□□□□ -2.05
PRE4YFR050C YFR020WP43600 232 aa2.25□□□□□ -2.05
PRE4YFR050C NBP35P52920 328 aa2.25□□□□□ -2.05
PRE4YFR050C COS12P53053 380 aa2.25□□□□□ -2.05
PRE4YFR050C CAF130P53280 1122 aaPredicted RBP2.25□□□□□ -2.05
PRE4YFR050C YMR160WQ03823 816 aa2.25□□□□□ -2.05
PRE4YFR050C RTN1Q04947 295 aaKnown RBP2.25□□□□□ -2.05
PRE4YFR050C TRI1Q05024 226 aa2.25□□□□□ -2.05
PRE4YFR050C TPO3Q06451 622 aa2.25□□□□□ -2.05
PRE4YFR050C CYK3Q07533 885 aa2.25□□□□□ -2.05
PRE4YFR050C GPM2Q12008 311 aa2.25□□□□□ -2.05
PRE4YFR050C TAF10Q12030 206 aa2.25□□□□□ -2.05
PRE4YFR050C DIN7Q12086 430 aa2.25□□□□□ -2.05
PRE4YFR050C GET3Q12154 354 aaKnown RBP2.25□□□□□ -2.05
PRE4YFR050C RGT2Q12300 763 aa2.25□□□□□ -2.05
PRE4YFR050C FAS1P07149 2051 aaKnown RBP2.24□□□□□ -2.05
PRE4YFR050C PRE2P30656 287 aaKnown RBP2.24□□□□□ -2.05
PRE4YFR050C NIP1P32497 812 aaKnown RBP2.24□□□□□ -2.05
PRE4YFR050C ANP1P32629 500 aa2.24□□□□□ -2.05
PRE4YFR050C MRP4P32902 394 aa2.24□□□□□ -2.05
PRE4YFR050C MTR2P34232 184 aaKnown RBP2.24□□□□□ -2.05
PRE4YFR050C SMF1P38925 575 aa2.24□□□□□ -2.05
PRE4YFR050C FET3P38993 636 aa2.24□□□□□ -2.05
PRE4YFR050C JEM1P40358 645 aa2.24□□□□□ -2.05
PRE4YFR050C FIS1P40515 155 aa2.24□□□□□ -2.05
PRE4YFR050C CIR1P42940 261 aa2.24□□□□□ -2.05
PRE4YFR050C NMD5P46970 1048 aa2.24□□□□□ -2.05
PRE4YFR050C TAN1P53072 289 aaPredicted RBP2.24□□□□□ -2.05
PRE4YFR050C TOF1P53840 1238 aa2.24□□□□□ -2.05
PRE4YFR050C CNM67P53865 581 aaKnown RBP2.24□□□□□ -2.05
PRE4YFR050C YNL058CP53947 316 aa2.24□□□□□ -2.05
PRE4YFR050C YML119WQ03208 357 aa2.24□□□□□ -2.05
PRE4YFR050C TRS31Q03337 283 aa2.24□□□□□ -2.05
PRE4YFR050C SND1Q04007 877 aa2.24□□□□□ -2.05
PRE4YFR050C RAD33Q04231 177 aa2.24□□□□□ -2.05
PRE4YFR050C PLM2Q04383 521 aa2.24□□□□□ -2.05
PRE4YFR050C RSF1Q05043 376 aa2.24□□□□□ -2.05
PRE4YFR050C ECM7Q06200 448 aa2.24□□□□□ -2.05
PRE4YFR050C TFC6Q06339 672 aa2.24□□□□□ -2.05
PRE4YFR050C IES4Q08561 116 aa2.24□□□□□ -2.05
PRE4YFR050C RCN2Q12044 265 aa2.24□□□□□ -2.05
PRE4YFR050C NCE102Q12207 173 aaRIP-Chip data2.24□□□□□ -2.05not detected
PRE4YFR050C YCR102CP25608 368 aa2.23□□□□□ -2.05
PRE4YFR050C SIP1P32578 815 aa2.23□□□□□ -2.05
PRE4YFR050C NIC96P34077 839 aa2.23□□□□□ -2.05
PRE4YFR050C YLF2P38746 405 aa2.23□□□□□ -2.05
PRE4YFR050C SWD1P39706 426 aa2.23□□□□□ -2.05
PRE4YFR050C YER130CP39959 443 aa2.23□□□□□ -2.05
PRE4YFR050C TPM2P40414 161 aa2.23□□□□□ -2.05
PRE4YFR050C SAE2P46946 345 aa2.23□□□□□ -2.05
PRE4YFR050C CTK3P46963 296 aaPredicted RBP2.23□□□□□ -2.05
PRE4YFR050C MAL12P53341 584 aa2.23□□□□□ -2.05
PRE4YFR050C RSC9Q03124 581 aa2.23□□□□□ -2.05
PRE4YFR050C TRS130Q03660 1102 aa2.23□□□□□ -2.05
PRE4YFR050C MYO5Q04439 1219 aaKnown RBP2.23□□□□□ -2.05
PRE4YFR050C HRD3Q05787 833 aa2.23□□□□□ -2.05
PRE4YFR050C SPN1Q06505 410 aaPredicted RBP2.23□□□□□ -2.05
PRE4YFR050C ATG10Q07879 167 aa2.23□□□□□ -2.05
PRE4YFR050C CLP1Q08685 445 aaPredicted RBP2.23□□□□□ -2.05
PRE4YFR050C YLR111WQ12528 110 aa2.23□□□□□ -2.05
PRE4YFR050C PNO1Q99216 274 aaKnown RBP2.23□□□□□ -2.05
PRE4YFR050C CAR1P00812 333 aaKnown RBP2.22□□□□□ -2.05
PRE4YFR050C YPT1P01123 206 aaKnown RBP2.22□□□□□ -2.05
PRE4YFR050C BCY1P07278 416 aaKnown RBP2.22□□□□□ -2.05
PRE4YFR050C ILS1P09436 1072 aaKnown RBP2.22□□□□□ -2.05
PRE4YFR050C ADH4P10127 382 aa2.22□□□□□ -2.05
PRE4YFR050C YAP1P19880 650 aaKnown RBP2.22□□□□□ -2.05
PRE4YFR050C AMD2P22580 549 aa2.22□□□□□ -2.05
PRE4YFR050C YCR061WP25639 631 aa2.22□□□□□ -2.05
PRE4YFR050C YJU2P28320 278 aaPredicted RBP2.22□□□□□ -2.05
PRE4YFR050C PMT1P33775 817 aa2.22□□□□□ -2.05
PRE4YFR050C ARO9P38840 513 aaPredicted RBP2.22□□□□□ -2.05
PRE4YFR050C FHL1P39521 936 aa2.22□□□□□ -2.05
PRE4YFR050C IMA5P40884 581 aa2.22□□□□□ -2.05
PRE4YFR050C UFE1P41834 346 aa2.22□□□□□ -2.05
PRE4YFR050C BST1P43571 1029 aa2.22□□□□□ -2.05
PRE4YFR050C RTT102P53330 157 aa2.22□□□□□ -2.05
PRE4YFR050C IDP3P53982 420 aaKnown RBP2.22□□□□□ -2.05
PRE4YFR050C MPS1P54199 764 aa2.22□□□□□ -2.05
PRE4YFR050C ACS1Q01574 713 aa2.22□□□□□ -2.05
PRE4YFR050C EGD1Q02642 157 aaKnown RBP2.22□□□□□ -2.05
PRE4YFR050C YDL242WQ07746 117 aa2.22□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 25.7 ms