RNA–Protein interactions for RNA: YFL038C

YPT1, Transcript of Rab family GTPase, yeastyeast

Gene YPT1, Length 621 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT1YFL038C NDD1Q08887 554 aa6.37□□□□□ -1.39
YPT1YFL038C YPQ1Q12010 308 aa6.37□□□□□ -1.39
YPT1YFL038C YLR046CQ12253 270 aa6.37□□□□□ -1.39
YPT1YFL038C YOR012WQ12351 137 aa6.37□□□□□ -1.39
YPT1YFL038C ARG81P05085 880 aa6.36□□□□□ -1.39
YPT1YFL038C PRT1P06103 763 aaKnown RBP6.36□□□□□ -1.39
YPT1YFL038C RAD7P06779 565 aa6.36□□□□□ -1.39
YPT1YFL038C RSR1P13856 272 aa6.36□□□□□ -1.39
YPT1YFL038C MNE1P24720 663 aa6.36□□□□□ -1.39
YPT1YFL038C GEX1P25596 615 aa6.36□□□□□ -1.39
YPT1YFL038C AAR2P32357 355 aaPredicted RBP6.36□□□□□ -1.39
YPT1YFL038C ARP2P32381 391 aaKnown RBP6.36□□□□□ -1.39
YPT1YFL038C LIP5P32875 414 aa6.36□□□□□ -1.39
YPT1YFL038C TIP20P33891 701 aa6.36□□□□□ -1.39
YPT1YFL038C GEX2P36173 615 aa6.36□□□□□ -1.39
YPT1YFL038C FES1P38260 290 aa6.36□□□□□ -1.39
YPT1YFL038C HSE1P38753 452 aa6.36□□□□□ -1.39
YPT1YFL038C UBA4P38820 440 aa6.36□□□□□ -1.39
YPT1YFL038C APE4P38821 490 aa6.36□□□□□ -1.39
YPT1YFL038C MTW1P39731 289 aa6.36□□□□□ -1.39
YPT1YFL038C EXO1P39875 702 aa6.36□□□□□ -1.39
YPT1YFL038C RPH1P39956 796 aa6.36□□□□□ -1.39
YPT1YFL038C EMP65P40085 556 aa6.36□□□□□ -1.39
YPT1YFL038C YIL161WP40449 235 aaKnown RBP6.36□□□□□ -1.39
YPT1YFL038C AIM20P40451 204 aa6.36□□□□□ -1.39
YPT1YFL038C GAT1P43574 510 aa6.36□□□□□ -1.39
YPT1YFL038C IDP3P53982 420 aaKnown RBP6.36□□□□□ -1.39
YPT1YFL038C ORC3P54790 616 aa6.36□□□□□ -1.39
YPT1YFL038C SDH1Q00711 640 aa6.36□□□□□ -1.39
YPT1YFL038C YMR206WQ03695 313 aa6.36□□□□□ -1.39
YPT1YFL038C SSL1Q04673 461 aaPredicted RBP6.36□□□□□ -1.39
YPT1YFL038C BCH1Q05029 724 aa6.36□□□□□ -1.39
YPT1YFL038C YPR114WQ06107 315 aa6.36□□□□□ -1.39
YPT1YFL038C REH1Q06709 432 aa6.36□□□□□ -1.39
YPT1YFL038C YDL114WQ07530 308 aa6.36□□□□□ -1.39
YPT1YFL038C IRC10Q08118 586 aa6.36□□□□□ -1.39
YPT1YFL038C MHF2Q3E829 80 aa6.36□□□□□ -1.39
YPT1YFL038C YOR338WQ99326 363 aa6.36□□□□□ -1.39
YPT1YFL038C DAL81P21657 970 aa6.35□□□□□ -1.39
YPT1YFL038C CAD1P24813 409 aaKnown RBP6.35□□□□□ -1.39
YPT1YFL038C UBC8P28263 218 aa6.35□□□□□ -1.39
YPT1YFL038C PUP2P32379 260 aa6.35□□□□□ -1.39
YPT1YFL038C SFP1P32432 683 aa6.35□□□□□ -1.39
YPT1YFL038C NPL6P32832 435 aa6.35□□□□□ -1.39
YPT1YFL038C MRPL6P32904 214 aa6.35□□□□□ -1.39
YPT1YFL038C PRP18P33411 251 aaPredicted RBP6.35□□□□□ -1.39
YPT1YFL038C SEC66P33754 206 aa6.35□□□□□ -1.39
YPT1YFL038C RMA1P36001 430 aaKnown RBP6.35□□□□□ -1.39
YPT1YFL038C NTR2P36118 322 aaPredicted RBP6.35□□□□□ -1.39
YPT1YFL038C RIB1P38066 345 aa6.35□□□□□ -1.39
YPT1YFL038C ERV46P39727 415 aa6.35□□□□□ -1.39
YPT1YFL038C PAN6P40459 309 aa6.35□□□□□ -1.39
YPT1YFL038C RMD8P43620 662 aa6.35□□□□□ -1.39
YPT1YFL038C GUS1P46655 708 aaKnown RBP RIP-Chip data6.35□□□□□ -1.39not detected
YPT1YFL038C STB2P46679 850 aa6.35□□□□□ -1.39
YPT1YFL038C YGL176CP46945 554 aa6.35□□□□□ -1.39
YPT1YFL038C ATP22P50273 684 aaPredicted RBP6.35□□□□□ -1.39
YPT1YFL038C PSP1P50896 841 aaKnown RBP6.35□□□□□ -1.39
YPT1YFL038C CAF120P53836 1060 aa6.35□□□□□ -1.39
YPT1YFL038C YKR005CQ02203 525 aa6.35□□□□□ -1.39
YPT1YFL038C YPL034WQ03083 165 aa6.35□□□□□ -1.39
YPT1YFL038C RAD34Q06665 692 aa6.35□□□□□ -1.39
YPT1YFL038C DTD1Q07648 150 aaKnown RBP6.35□□□□□ -1.39
YPT1YFL038C YLL032CQ07834 825 aaKnown RBP RIP-Chip data6.35□□□□□ -1.39not detected
YPT1YFL038C YDR056CQ12025 205 aa6.35□□□□□ -1.39
YPT1YFL038C HER1Q12276 1246 aa6.35□□□□□ -1.39
YPT1YFL038C RPN6Q12377 434 aa6.35□□□□□ -1.39
YPT1YFL038C GTT2Q12390 233 aa6.35□□□□□ -1.39
YPT1YFL038C MDM12Q92328 271 aa6.35□□□□□ -1.39
YPT1YFL038C RIB3Q99258 208 aa6.35□□□□□ -1.39
YPT1YFL038C YLR422WQ06409 1932 aa6.35□□□□□ -1.39
YPT1YFL038C PHO5P00635 467 aa6.34□□□□□ -1.39
YPT1YFL038C RAS2P01120 322 aaKnown RBP6.34□□□□□ -1.39
YPT1YFL038C GPH1P06738 902 aaKnown RBP6.34□□□□□ -1.39
YPT1YFL038C DST1P07273 309 aa6.34□□□□□ -1.39
YPT1YFL038C PDE1P22434 369 aa6.34□□□□□ -1.39
YPT1YFL038C NTG1P31378 399 aa6.34□□□□□ -1.39
YPT1YFL038C CDC5P32562 705 aa6.34□□□□□ -1.39
YPT1YFL038C MAE1P36013 669 aaKnown RBP6.34□□□□□ -1.39
YPT1YFL038C TPO5P36029 618 aa6.34□□□□□ -1.39
YPT1YFL038C SRL3P36167 246 aa6.34□□□□□ -1.39
YPT1YFL038C YCR087C-AP37263 153 aa6.34□□□□□ -1.39
YPT1YFL038C ECM8P38246 354 aa6.34□□□□□ -1.39
YPT1YFL038C BMT2P38278 337 aa6.34□□□□□ -1.39
YPT1YFL038C YHR020WP38708 688 aaKnown RBP6.34□□□□□ -1.39
YPT1YFL038C SSZ1P38788 538 aaKnown RBP6.34□□□□□ -1.39
YPT1YFL038C MTG2P38860 518 aa6.34□□□□□ -1.39
YPT1YFL038C EGD2P38879 174 aaKnown RBP6.34□□□□□ -1.39
YPT1YFL038C PCF11P39081 626 aaPredicted RBP6.34□□□□□ -1.39
YPT1YFL038C RBL2P48606 106 aaKnown RBP6.34□□□□□ -1.39
YPT1YFL038C SLD3P53135 668 aa6.34□□□□□ -1.39
YPT1YFL038C DUS1P53759 423 aaKnown RBP6.34□□□□□ -1.39
YPT1YFL038C MPS1P54199 764 aa6.34□□□□□ -1.39
YPT1YFL038C NPL3Q01560 414 aaKnown RBP RIP-Chip data6.34□□□□□ -1.39not detected
YPT1YFL038C PNG1Q02890 363 aa6.34□□□□□ -1.39
YPT1YFL038C PIR1Q03178 341 aa6.34□□□□□ -1.39
YPT1YFL038C TLG1Q03322 224 aa6.34□□□□□ -1.39
YPT1YFL038C RSN1Q03516 953 aa6.34□□□□□ -1.39
YPT1YFL038C VHS1Q03785 461 aa6.34□□□□□ -1.39
YPT1YFL038C VTA1Q06263 330 aa6.34□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 17.9 ms