RNA–Protein interactions for RNA: YER003C

PMI40, Transcript of Mannose-6-phosphate isomerase, yeast

Gene PMI40, Length 1,290 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PMI40	YER003C	ATF1	P40353	525 aa		3.52	□□□□□ -1.85
PMI40	YER003C	EFM4	P40516	257 aa		3.52	□□□□□ -1.85
PMI40	YER003C	YGR149W	P48236	432 aa		3.52	□□□□□ -1.85
PMI40	YER003C	YGL108C	P53139	140 aa		3.52	□□□□□ -1.85
PMI40	YER003C	EOS1	P53938	366 aa		3.52	□□□□□ -1.85
PMI40	YER003C	ARP10	Q04549	284 aa		3.52	□□□□□ -1.85
PMI40	YER003C	RSF1	Q05043	376 aa		3.52	□□□□□ -1.85
PMI40	YER003C	MMR1	Q06324	491 aa		3.52	□□□□□ -1.85
PMI40	YER003C	DCI1	Q08558	271 aa		3.52	□□□□□ -1.85
PMI40	YER003C	UAF30	Q08747	228 aa		3.52	□□□□□ -1.85
PMI40	YER003C	NDJ1	Q12366	352 aa		3.52	□□□□□ -1.85
PMI40	YER003C	GPH1	P06738	902 aa	Known RBP	3.51	□□□□□ -1.85
PMI40	YER003C	COR1	P07256	457 aa		3.51	□□□□□ -1.85
PMI40	YER003C	RPL1A	P0CX43	217 aa	Known RBP	3.51	□□□□□ -1.85
PMI40	YER003C	RPL1B	P0CX44	217 aa	Known RBP	3.51	□□□□□ -1.85
PMI40	YER003C	SNF3	P10870	884 aa		3.51	□□□□□ -1.85
PMI40	YER003C	YIM1	P28625	365 aa		3.51	□□□□□ -1.85
PMI40	YER003C	AFG1	P32317	509 aa		3.51	□□□□□ -1.85
PMI40	YER003C	YKL023W	P36103	277 aa	Known RBP	3.51	□□□□□ -1.85
PMI40	YER003C	SNG1	P46950	547 aa		3.51	□□□□□ -1.85
PMI40	YER003C	TAX4	P47030	604 aa		3.51	□□□□□ -1.85
PMI40	YER003C	HEF3	P53978	1044 aa	Known RBP	3.51	□□□□□ -1.85
PMI40	YER003C	ACL4	Q03771	387 aa		3.51	□□□□□ -1.85
PMI40	YER003C	HEL2	Q05580	639 aa	Known RBP	3.51	□□□□□ -1.85
PMI40	YER003C	YDL057W	Q07379	328 aa		3.51	□□□□□ -1.85
PMI40	YER003C	SIL1	Q08199	421 aa		3.51	□□□□□ -1.85
PMI40	YER003C	THP1	Q08231	455 aa		3.51	□□□□□ -1.85
PMI40	YER003C	YOR365C	Q08844	703 aa		3.51	□□□□□ -1.85
PMI40	YER003C	VPS54	Q12071	889 aa		3.51	□□□□□ -1.85
PMI40	YER003C	MED2	Q12124	431 aa		3.51	□□□□□ -1.85
PMI40	YER003C	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	3.51	□□□□□ -1.85	not detected
PMI40	YER003C	FRE6	Q12473	712 aa		3.51	□□□□□ -1.85
PMI40	YER003C	VMA2	P16140	517 aa	Known RBP	3.5	□□□□□ -1.85
PMI40	YER003C	SRV2	P17555	526 aa	Known RBP	3.5	□□□□□ -1.85
PMI40	YER003C	RPB8	P20436	146 aa		3.5	□□□□□ -1.85
PMI40	YER003C	FLO10	P36170	1169 aa		3.5	□□□□□ -1.85
PMI40	YER003C	ROT2	P38138	954 aa		3.5	□□□□□ -1.85
PMI40	YER003C	LAG1	P38703	411 aa		3.5	□□□□□ -1.85
PMI40	YER003C	PHO90	P39535	881 aa		3.5	□□□□□ -1.85
PMI40	YER003C	HXT9	P40885	567 aa		3.5	□□□□□ -1.85
PMI40	YER003C	RMD9	P53140	646 aa	Known RBP	3.5	□□□□□ -1.85
PMI40	YER003C	ATP23	P53722	227 aa		3.5	□□□□□ -1.85
PMI40	YER003C	SHR3	Q02774	210 aa		3.5	□□□□□ -1.85
PMI40	YER003C	YPL107W	Q02873	248 aa		3.5	□□□□□ -1.85
PMI40	YER003C	PRP42	Q03776	544 aa	Known RBP	3.5	□□□□□ -1.85
PMI40	YER003C	COQ11	Q05892	277 aa		3.5	□□□□□ -1.85
PMI40	YER003C	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	3.5	□□□□□ -1.85	not detected
PMI40	YER003C	CUE5	Q08412	411 aa	Known RBP	3.5	□□□□□ -1.85
PMI40	YER003C	CFT2	Q12102	859 aa	Predicted RBP	3.5	□□□□□ -1.85
PMI40	YER003C	NFI1	Q12216	726 aa		3.5	□□□□□ -1.85
PMI40	YER003C	HSP42	Q12329	375 aa		3.5	□□□□□ -1.85
PMI40	YER003C	RAV1	P47104	1357 aa		3.5	□□□□□ -1.85
PMI40	YER003C	PEP5	P12868	1029 aa		3.49	□□□□□ -1.85
PMI40	YER003C	HOM2	P13663	365 aa	Known RBP	3.49	□□□□□ -1.85
PMI40	YER003C	SPO7	P18410	259 aa		3.49	□□□□□ -1.85
PMI40	YER003C	URA4	P20051	364 aa		3.49	□□□□□ -1.85
PMI40	YER003C	CNA1	P23287	553 aa		3.49	□□□□□ -1.85
PMI40	YER003C	BRF1	P29056	596 aa		3.49	□□□□□ -1.85
PMI40	YER003C	GYP6	P32806	458 aa		3.49	□□□□□ -1.85
PMI40	YER003C	LAS1	P36146	502 aa	Predicted RBP	3.49	□□□□□ -1.85
PMI40	YER003C	DAD2	P36162	133 aa		3.49	□□□□□ -1.85
PMI40	YER003C	ARA1	P38115	344 aa		3.49	□□□□□ -1.85
PMI40	YER003C	DUG2	P38149	878 aa		3.49	□□□□□ -1.85
PMI40	YER003C	BNA4	P38169	460 aa		3.49	□□□□□ -1.85
PMI40	YER003C	TCM62	P38228	572 aa	Known RBP	3.49	□□□□□ -1.85
PMI40	YER003C	TIF4631	P39935	952 aa	Known RBP	3.49	□□□□□ -1.85
PMI40	YER003C	YIL060W	P40519	144 aa		3.49	□□□□□ -1.85
PMI40	YER003C	NMD5	P46970	1048 aa		3.49	□□□□□ -1.85
PMI40	YER003C	TOM22	P49334	152 aa		3.49	□□□□□ -1.85
PMI40	YER003C	DUG3	P53871	357 aa		3.49	□□□□□ -1.85
PMI40	YER003C	CAC2	Q04199	468 aa		3.49	□□□□□ -1.85
PMI40	YER003C	YMR130W	Q04223	302 aa		3.49	□□□□□ -1.85
PMI40	YER003C	MCP2	Q06567	569 aa		3.49	□□□□□ -1.85
PMI40	YER003C	APL5	Q08951	932 aa	Known RBP	3.49	□□□□□ -1.85
PMI40	YER003C	AEP3	Q12089	606 aa		3.49	□□□□□ -1.85
PMI40	YER003C	VAM3	Q12241	283 aa		3.49	□□□□□ -1.85
PMI40	YER003C	YNL162W-A	Q3E7A8	72 aa		3.49	□□□□□ -1.85
PMI40	YER003C	RIP1	P08067	215 aa		3.48	□□□□□ -1.85
PMI40	YER003C	YML002W	P0CF17	737 aa		3.48	□□□□□ -1.85
PMI40	YER003C	CLN1	P20437	546 aa		3.48	□□□□□ -1.85
PMI40	YER003C	URE2	P23202	354 aa	Known RBP	3.48	□□□□□ -1.85
PMI40	YER003C	SGV1	P23293	657 aa	Known RBP	3.48	□□□□□ -1.85
PMI40	YER003C	GEX1	P25596	615 aa		3.48	□□□□□ -1.85
PMI40	YER003C	COQ3	P27680	312 aa		3.48	□□□□□ -1.85
PMI40	YER003C	POT1	P27796	417 aa	Known RBP RIP-Chip data	3.48	□□□□□ -1.85	not detected
PMI40	YER003C	KRE2	P27809	442 aa		3.48	□□□□□ -1.85
PMI40	YER003C	MCM4	P30665	933 aa	Known RBP	3.48	□□□□□ -1.85
PMI40	YER003C	SNC1	P31109	117 aa		3.48	□□□□□ -1.85
PMI40	YER003C	HIR2	P32480	875 aa		3.48	□□□□□ -1.85
PMI40	YER003C	UIP5	P36137	443 aa		3.48	□□□□□ -1.85
PMI40	YER003C	STV1	P37296	890 aa		3.48	□□□□□ -1.85
PMI40	YER003C	GDT1	P38301	280 aa	Predicted RBP	3.48	□□□□□ -1.85
PMI40	YER003C	SER3	P40054	469 aa		3.48	□□□□□ -1.85
PMI40	YER003C	YMR147W	P40218	223 aa	Known RBP	3.48	□□□□□ -1.85
PMI40	YER003C	YJL132W	P47014	750 aa		3.48	□□□□□ -1.85
PMI40	YER003C	ECM27	P47144	725 aa		3.48	□□□□□ -1.85
PMI40	YER003C	OCA1	P50946	238 aa	Predicted RBP	3.48	□□□□□ -1.85
PMI40	YER003C	MLC1	P53141	149 aa		3.48	□□□□□ -1.85
PMI40	YER003C	DRN1	P53255	507 aa	Known RBP	3.48	□□□□□ -1.85
PMI40	YER003C	ZPR1	P53303	486 aa	Known RBP	3.48	□□□□□ -1.85

Retrieved 100 of 5,963 RNA–protein pairs in 33.1 ms