RNA–Protein interactions for RNA: YER002W

NOP16, Transcript of Constituent of 66S pre-ribosomal particles, yeast

Gene NOP16, Length 696 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NOP16	YER002W	SET3	P36124	751 aa		4.83	□□□□□ -1.64
NOP16	YER002W	ARP1	P38696	384 aa		4.83	□□□□□ -1.64
NOP16	YER002W	SEO1	P39709	593 aa		4.83	□□□□□ -1.64
NOP16	YER002W	SSP120	P39931	234 aa	Known RBP	4.83	□□□□□ -1.64
NOP16	YER002W	EMP65	P40085	556 aa		4.83	□□□□□ -1.64
NOP16	YER002W	BNA2	P47125	453 aa		4.83	□□□□□ -1.64
NOP16	YER002W	MNT2	P53059	558 aa		4.83	□□□□□ -1.64
NOP16	YER002W	COG1	P53079	417 aa		4.83	□□□□□ -1.64
NOP16	YER002W	SPC105	P53148	917 aa		4.83	□□□□□ -1.64
NOP16	YER002W	NMA2	P53204	395 aa		4.83	□□□□□ -1.64
NOP16	YER002W	ART5	P53244	586 aa	Known RBP	4.83	□□□□□ -1.64
NOP16	YER002W	LSC1	P53598	329 aa	Known RBP	4.83	□□□□□ -1.64
NOP16	YER002W	PET117	Q02771	107 aa		4.83	□□□□□ -1.64
NOP16	YER002W	RPN9	Q04062	393 aa	Known RBP	4.83	□□□□□ -1.64
NOP16	YER002W	PPN1	Q04119	674 aa		4.83	□□□□□ -1.64
NOP16	YER002W	CDC123	Q05791	360 aa		4.83	□□□□□ -1.64
NOP16	YER002W	MCP2	Q06567	569 aa		4.83	□□□□□ -1.64
NOP16	YER002W	OMS1	Q06668	471 aa		4.83	□□□□□ -1.64
NOP16	YER002W	YOR338W	Q99326	363 aa		4.83	□□□□□ -1.64
NOP16	YER002W	ERG20	P08524	352 aa	Known RBP	4.82	□□□□□ -1.64
NOP16	YER002W	SSC1	P0CS90	654 aa	Known RBP	4.82	□□□□□ -1.64
NOP16	YER002W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	4.82	□□□□□ -1.64	not detected
NOP16	YER002W	HRR25	P29295	494 aa	Known RBP	4.82	□□□□□ -1.64
NOP16	YER002W	YHI9	P38765	294 aa		4.82	□□□□□ -1.64
NOP16	YER002W	TES1	P41903	349 aa	Known RBP	4.82	□□□□□ -1.64
NOP16	YER002W	CTK3	P46963	296 aa	Predicted RBP	4.82	□□□□□ -1.64
NOP16	YER002W	GLG2	P47011	380 aa		4.82	□□□□□ -1.64
NOP16	YER002W	NUP84	P52891	726 aa		4.82	□□□□□ -1.64
NOP16	YER002W	EMC4	P53073	190 aa		4.82	□□□□□ -1.64
NOP16	YER002W	SLD3	P53135	668 aa		4.82	□□□□□ -1.64
NOP16	YER002W	YNL143C	P53908	130 aa		4.82	□□□□□ -1.64
NOP16	YER002W	YMR178W	Q03219	274 aa	Known RBP	4.82	□□□□□ -1.64
NOP16	YER002W	BUD22	Q04347	519 aa	Known RBP	4.82	□□□□□ -1.64
NOP16	YER002W	YDR338C	Q05497	695 aa		4.82	□□□□□ -1.64
NOP16	YER002W	CDA1	Q06702	301 aa		4.82	□□□□□ -1.64
NOP16	YER002W	HAL9	Q12180	1030 aa		4.82	□□□□□ -1.64
NOP16	YER002W	NCA2	Q12374	616 aa		4.82	□□□□□ -1.64
NOP16	YER002W	MEX67	Q99257	599 aa	Known RBP	4.82	□□□□□ -1.64
NOP16	YER002W	YLR149C	Q99296	730 aa		4.82	□□□□□ -1.64
NOP16	YER002W	SEC63	P14906	663 aa		4.81	□□□□□ -1.64
NOP16	YER002W	NSP1	P14907	823 aa	Known RBP	4.81	□□□□□ -1.64
NOP16	YER002W	SRV2	P17555	526 aa	Known RBP	4.81	□□□□□ -1.64
NOP16	YER002W	AMD2	P22580	549 aa		4.81	□□□□□ -1.64
NOP16	YER002W	YCR051W	P25631	222 aa		4.81	□□□□□ -1.64
NOP16	YER002W	BEM1	P29366	551 aa		4.81	□□□□□ -1.64
NOP16	YER002W	GDA1	P32621	518 aa		4.81	□□□□□ -1.64
NOP16	YER002W	BEM3	P32873	1128 aa		4.81	□□□□□ -1.64
NOP16	YER002W	CYM1	P32898	989 aa		4.81	□□□□□ -1.64
NOP16	YER002W	LDB7	P38210	180 aa		4.81	□□□□□ -1.64
NOP16	YER002W	LRP1	P38801	184 aa	Known RBP	4.81	□□□□□ -1.64
NOP16	YER002W	FMO1	P38866	432 aa		4.81	□□□□□ -1.64
NOP16	YER002W	CIN4	P39110	191 aa		4.81	□□□□□ -1.64
NOP16	YER002W	PZF1	P39933	429 aa		4.81	□□□□□ -1.64
NOP16	YER002W	RPH1	P39956	796 aa		4.81	□□□□□ -1.64
NOP16	YER002W	SEC28	P40509	296 aa	Known RBP	4.81	□□□□□ -1.64
NOP16	YER002W	DSN1	P40568	576 aa		4.81	□□□□□ -1.64
NOP16	YER002W	BIO4	P53630	237 aa		4.81	□□□□□ -1.64
NOP16	YER002W	TDA7	P53882	636 aa	Predicted RBP	4.81	□□□□□ -1.64
NOP16	YER002W	VAC7	P53950	1165 aa		4.81	□□□□□ -1.64
NOP16	YER002W	SSL1	Q04673	461 aa	Predicted RBP	4.81	□□□□□ -1.64
NOP16	YER002W	FAR8	Q05040	523 aa		4.81	□□□□□ -1.64
NOP16	YER002W	YLR053C	Q12026	108 aa		4.81	□□□□□ -1.64
NOP16	YER002W	TGL5	Q12043	749 aa		4.81	□□□□□ -1.64
NOP16	YER002W	KCS1	Q12494	1050 aa		4.81	□□□□□ -1.64
NOP16	YER002W	RGS2	Q99188	309 aa		4.81	□□□□□ -1.64
NOP16	YER002W	TAD3	Q9URQ3	322 aa		4.81	□□□□□ -1.64
NOP16	YER002W	RAD3	P06839	778 aa		4.8	□□□□□ -1.64
NOP16	YER002W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	4.8	□□□□□ -1.64	not detected
NOP16	YER002W	APA1	P16550	321 aa	Known RBP	4.8	□□□□□ -1.64
NOP16	YER002W	UBA1	P22515	1024 aa	Known RBP	4.8	□□□□□ -1.64
NOP16	YER002W	SED4	P25365	1065 aa		4.8	□□□□□ -1.64
NOP16	YER002W	BRF1	P29056	596 aa		4.8	□□□□□ -1.64
NOP16	YER002W	NGG1	P32494	702 aa		4.8	□□□□□ -1.64
NOP16	YER002W	PHO11	P35842	467 aa		4.8	□□□□□ -1.64
NOP16	YER002W	STB6	P36085	766 aa		4.8	□□□□□ -1.64
NOP16	YER002W	YSW1	P38280	609 aa		4.8	□□□□□ -1.64
NOP16	YER002W	YBR259W	P38338	688 aa		4.8	□□□□□ -1.64
NOP16	YER002W	PHO12	P38693	467 aa		4.8	□□□□□ -1.64
NOP16	YER002W	GND1	P38720	489 aa	Known RBP	4.8	□□□□□ -1.64
NOP16	YER002W	STN1	P38960	494 aa		4.8	□□□□□ -1.64
NOP16	YER002W	YJL206C	P39529	758 aa		4.8	□□□□□ -1.64
NOP16	YER002W	HAT2	P39984	401 aa		4.8	□□□□□ -1.64
NOP16	YER002W	GPP2	P40106	250 aa	Known RBP	4.8	□□□□□ -1.64
NOP16	YER002W	PEP8	P40335	379 aa		4.8	□□□□□ -1.64
NOP16	YER002W	ALG8	P40351	577 aa		4.8	□□□□□ -1.64
NOP16	YER002W	SER33	P40510	469 aa		4.8	□□□□□ -1.64
NOP16	YER002W	IME4	P41833	600 aa		4.8	□□□□□ -1.64
NOP16	YER002W	NIT2	P47016	307 aa		4.8	□□□□□ -1.64
NOP16	YER002W	LIA1	P47120	325 aa	Known RBP	4.8	□□□□□ -1.64
NOP16	YER002W	MTR3	P48240	250 aa	Predicted RBP	4.8	□□□□□ -1.64
NOP16	YER002W	COG7	P53195	279 aa		4.8	□□□□□ -1.64
NOP16	YER002W	BUD32	P53323	261 aa		4.8	□□□□□ -1.64
NOP16	YER002W	ECM9	Q02202	377 aa		4.8	□□□□□ -1.64
NOP16	YER002W	TAF11	Q04226	346 aa		4.8	□□□□□ -1.64
NOP16	YER002W	CIA1	Q05583	330 aa		4.8	□□□□□ -1.64
NOP16	YER002W	YLR177W	Q06251	628 aa		4.8	□□□□□ -1.64
NOP16	YER002W	YOR378W	Q08902	515 aa		4.8	□□□□□ -1.64
NOP16	YER002W	PUS9	Q12069	462 aa		4.8	□□□□□ -1.64
NOP16	YER002W	RMD5	Q12508	421 aa		4.8	□□□□□ -1.64
NOP16	YER002W	GLN4	P13188	809 aa	Known RBP	4.79	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 36.4 ms