RNA–Protein interactions for RNA: YEL041W

YEF1, Transcript of ATP-NADH kinase, yeast

Gene YEF1, Length 1,488 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YEF1	YEL041W	LCB2	P40970	561 aa		5.64	□□□□□ -1.51
YEF1	YEL041W	HXT14	P42833	540 aa		5.64	□□□□□ -1.51
YEF1	YEL041W	SAE2	P46946	345 aa		5.64	□□□□□ -1.51
YEF1	YEL041W	VPS73	P53142	486 aa	Known RBP	5.64	□□□□□ -1.51
YEF1	YEL041W	YGR127W	P53275	312 aa		5.64	□□□□□ -1.51
YEF1	YEL041W	DPB4	Q04603	196 aa	Known RBP	5.64	□□□□□ -1.51
YEF1	YEL041W	APC5	Q08683	685 aa		5.64	□□□□□ -1.51
YEF1	YEL041W	ATG9	Q12142	997 aa		5.64	□□□□□ -1.51
YEF1	YEL041W	SEC39	Q12745	709 aa		5.64	□□□□□ -1.51
YEF1	YEL041W	NCB2	Q92317	146 aa		5.64	□□□□□ -1.51
YEF1	YEL041W	RPL7A	P05737	244 aa	Known RBP	5.63	□□□□□ -1.51
YEF1	YEL041W	MDH1	P17505	334 aa	Known RBP RIP-Chip data	5.63	□□□□□ -1.51	not detected
YEF1	YEL041W	GLK1	P17709	500 aa	Known RBP	5.63	□□□□□ -1.51
YEF1	YEL041W	APN1	P22936	367 aa		5.63	□□□□□ -1.51
YEF1	YEL041W	URA7	P28274	579 aa	Known RBP	5.63	□□□□□ -1.51
YEF1	YEL041W	SEC66	P33754	206 aa		5.63	□□□□□ -1.51
YEF1	YEL041W	TIF3	P34167	436 aa	Known RBP	5.63	□□□□□ -1.51
YEF1	YEL041W	SEC28	P40509	296 aa	Known RBP	5.63	□□□□□ -1.51
YEF1	YEL041W	YFR020W	P43600	232 aa		5.63	□□□□□ -1.51
YEF1	YEL041W	YJL055W	P47044	245 aa		5.63	□□□□□ -1.51
YEF1	YEL041W	IPI3	P53877	555 aa		5.63	□□□□□ -1.51
YEF1	YEL041W	RPA49	Q01080	415 aa	Predicted RBP	5.63	□□□□□ -1.51
YEF1	YEL041W	TIM44	Q01852	431 aa		5.63	□□□□□ -1.51
YEF1	YEL041W	OAZ1	Q02803	292 aa		5.63	□□□□□ -1.51
YEF1	YEL041W	GYL1	Q04322	720 aa		5.63	□□□□□ -1.51
YEF1	YEL041W	YMR111C	Q04461	462 aa	Predicted RBP	5.63	□□□□□ -1.51
YEF1	YEL041W	ROY1	Q04847	553 aa		5.63	□□□□□ -1.51
YEF1	YEL041W	PUS9	Q12069	462 aa		5.63	□□□□□ -1.51
YEF1	YEL041W	LEU9	Q12166	604 aa	Known RBP	5.63	□□□□□ -1.51
YEF1	YEL041W	RPL7B	Q12213	244 aa	Known RBP	5.63	□□□□□ -1.51
YEF1	YEL041W	AFI1	Q99222	893 aa		5.63	□□□□□ -1.51
YEF1	YEL041W	YMR084W	A2P2R3	262 aa		5.62	□□□□□ -1.51
YEF1	YEL041W	VMA2	P16140	517 aa	Known RBP	5.62	□□□□□ -1.51
YEF1	YEL041W	CLC1	P17891	233 aa		5.62	□□□□□ -1.51
YEF1	YEL041W	PTK1	P36002	662 aa	Predicted RBP	5.62	□□□□□ -1.51
YEF1	YEL041W	TDA10	P42938	290 aa		5.62	□□□□□ -1.51
YEF1	YEL041W	DLD2	P46681	530 aa	Known RBP	5.62	□□□□□ -1.51
YEF1	YEL041W	ASN1	P49089	572 aa	Known RBP	5.62	□□□□□ -1.51
YEF1	YEL041W	ARX1	Q03862	593 aa	Known RBP	5.62	□□□□□ -1.51
YEF1	YEL041W	RPC11	Q04307	110 aa	Predicted RBP	5.62	□□□□□ -1.51
YEF1	YEL041W	INM2	Q05533	292 aa		5.62	□□□□□ -1.51
YEF1	YEL041W	VTA1	Q06263	330 aa		5.62	□□□□□ -1.51
YEF1	YEL041W	SMF3	Q12078	473 aa	Predicted RBP	5.62	□□□□□ -1.51
YEF1	YEL041W	PET111	P08468	800 aa		5.61	□□□□□ -1.51
YEF1	YEL041W	RNA1	P11745	407 aa	Known RBP	5.61	□□□□□ -1.51
YEF1	YEL041W	PMA2	P19657	947 aa		5.61	□□□□□ -1.51
YEF1	YEL041W	KGD1	P20967	1014 aa	Known RBP	5.61	□□□□□ -1.51
YEF1	YEL041W	TRX1	P22217	103 aa	Known RBP	5.61	□□□□□ -1.51
YEF1	YEL041W	PUP3	P25451	205 aa	Known RBP	5.61	□□□□□ -1.51
YEF1	YEL041W	IMG1	P25626	169 aa		5.61	□□□□□ -1.51
YEF1	YEL041W	YJU2	P28320	278 aa	Predicted RBP	5.61	□□□□□ -1.51
YEF1	YEL041W	CHS7	P38843	316 aa		5.61	□□□□□ -1.51
YEF1	YEL041W	ELO1	P39540	310 aa		5.61	□□□□□ -1.51
YEF1	YEL041W	SMC3	P47037	1230 aa		5.61	□□□□□ -1.51
YEF1	YEL041W	PEX25	Q02969	394 aa		5.61	□□□□□ -1.51
YEF1	YEL041W	ISN1	Q99312	450 aa		5.61	□□□□□ -1.51
YEF1	YEL041W	GSC2	P40989	1895 aa		5.6	□□□□□ -1.51
YEF1	YEL041W	MRP13	P12686	339 aa		5.6	□□□□□ -1.51
YEF1	YEL041W	CPR2	P23285	205 aa		5.6	□□□□□ -1.51
YEF1	YEL041W	DMC1	P25453	334 aa		5.6	□□□□□ -1.51
YEF1	YEL041W	IME2	P32581	645 aa		5.6	□□□□□ -1.51
YEF1	YEL041W	TFB1	P32776	642 aa		5.6	□□□□□ -1.51
YEF1	YEL041W	PTR3	P43606	678 aa		5.6	□□□□□ -1.51
YEF1	YEL041W	APT1	P49435	187 aa	Known RBP	5.6	□□□□□ -1.51
YEF1	YEL041W	STB4	P50104	949 aa		5.6	□□□□□ -1.51
YEF1	YEL041W	YGL242C	P53066	181 aa		5.6	□□□□□ -1.51
YEF1	YEL041W	MNP1	P53163	194 aa	Predicted RBP	5.6	□□□□□ -1.51
YEF1	YEL041W	NCS2	P53923	493 aa	Predicted RBP	5.6	□□□□□ -1.51
YEF1	YEL041W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	5.6	□□□□□ -1.51	not detected
YEF1	YEL041W	RBA50	Q04418	439 aa		5.6	□□□□□ -1.51
YEF1	YEL041W	ARO10	Q06408	635 aa		5.6	□□□□□ -1.51
YEF1	YEL041W	FMP45	Q07651	309 aa		5.6	□□□□□ -1.51
YEF1	YEL041W	FLO1	P32768	1537 aa		5.59	□□□□□ -1.51
YEF1	YEL041W	RPL3	P14126	387 aa	Known RBP	5.59	□□□□□ -1.51
YEF1	YEL041W	ART10	P18634	518 aa	Known RBP	5.59	□□□□□ -1.51
YEF1	YEL041W	KIN3	P22209	435 aa		5.59	□□□□□ -1.51
YEF1	YEL041W	RAD51	P25454	400 aa		5.59	□□□□□ -1.51
YEF1	YEL041W	BUD14	P27637	709 aa		5.59	□□□□□ -1.51
YEF1	YEL041W	GSH1	P32477	678 aa		5.59	□□□□□ -1.51
YEF1	YEL041W	MUP3	P38734	546 aa		5.59	□□□□□ -1.51
YEF1	YEL041W	TIF4631	P39935	952 aa	Known RBP	5.59	□□□□□ -1.51
YEF1	YEL041W	TCB2	P48231	1178 aa		5.59	□□□□□ -1.51
YEF1	YEL041W	MLC1	P53141	149 aa		5.59	□□□□□ -1.51
YEF1	YEL041W	KAP120	Q02932	1032 aa		5.59	□□□□□ -1.51
YEF1	YEL041W	YLH47	Q06493	454 aa		5.59	□□□□□ -1.51
YEF1	YEL041W	RAD34	Q06665	692 aa		5.59	□□□□□ -1.51
YEF1	YEL041W	CYK3	Q07533	885 aa		5.59	□□□□□ -1.51
YEF1	YEL041W	RPC40	P07703	335 aa	Known RBP	5.58	□□□□□ -1.52
YEF1	YEL041W	MRP2	P10663	115 aa	Predicted RBP	5.58	□□□□□ -1.52
YEF1	YEL041W	CDC43	P18898	376 aa		5.58	□□□□□ -1.52
YEF1	YEL041W	BOS1	P25385	244 aa		5.58	□□□□□ -1.52
YEF1	YEL041W	PUP2	P32379	260 aa		5.58	□□□□□ -1.52
YEF1	YEL041W	YME1	P32795	747 aa		5.58	□□□□□ -1.52
YEF1	YEL041W	UGP1	P32861	499 aa	Known RBP	5.58	□□□□□ -1.52
YEF1	YEL041W	ICS2	P38284	255 aa		5.58	□□□□□ -1.52
YEF1	YEL041W	KEL1	P38853	1164 aa	Known RBP	5.58	□□□□□ -1.52
YEF1	YEL041W	STB2	P46679	850 aa		5.58	□□□□□ -1.52
YEF1	YEL041W	SLI1	P53304	468 aa		5.58	□□□□□ -1.52
YEF1	YEL041W	APL4	Q12028	832 aa		5.58	□□□□□ -1.52
YEF1	YEL041W	ERV1	P27882	189 aa		5.58	□□□□□ -1.52

Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms