RNA–Protein interactions for RNA: YDR489W

SLD5, Transcript of Subunit of the GINS complex (Sld5p, Psf1p, Psf2p, Psf3p), yeastyeast

Gene SLD5, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLD5YDR489W DIG1Q03063 452 aaKnown RBP3.13□□□□□ -1.91
SLD5YDR489W MSS11Q03825 758 aa3.13□□□□□ -1.91
SLD5YDR489W YMR087WQ04299 284 aa3.13□□□□□ -1.91
SLD5YDR489W YLR352WQ06479 807 aa3.13□□□□□ -1.91
SLD5YDR489W SSK1Q07084 712 aa3.13□□□□□ -1.91
SLD5YDR489W YOL159C-AQ3E769 90 aa3.13□□□□□ -1.91
SLD5YDR489W HSH49Q99181 213 aaPredicted RBP3.13□□□□□ -1.91
SLD5YDR489W BAR1P12630 587 aa3.12□□□□□ -1.91
SLD5YDR489W AMD1P15274 810 aaKnown RBP3.12□□□□□ -1.91
SLD5YDR489W SUI2P20459 304 aaKnown RBP3.12□□□□□ -1.91
SLD5YDR489W SEC1P30619 724 aaKnown RBP3.12□□□□□ -1.91
SLD5YDR489W ERG1P32476 496 aaKnown RBP3.12□□□□□ -1.91
SLD5YDR489W MSN2P33748 704 aa3.12□□□□□ -1.91
SLD5YDR489W SHP1P34223 423 aa3.12□□□□□ -1.91
SLD5YDR489W ECM15P35195 104 aa3.12□□□□□ -1.91
SLD5YDR489W CMC1P36064 111 aa3.12□□□□□ -1.91
SLD5YDR489W MET30P39014 640 aa3.12□□□□□ -1.91
SLD5YDR489W YIL169CP40442 995 aa3.12□□□□□ -1.91
SLD5YDR489W DOT5P40553 215 aa3.12□□□□□ -1.91
SLD5YDR489W ATG27P46989 271 aa3.12□□□□□ -1.91
SLD5YDR489W HEF3P53978 1044 aaKnown RBP3.12□□□□□ -1.91
SLD5YDR489W NUP53Q03790 475 aa3.12□□□□□ -1.91
SLD5YDR489W YLR287CQ05881 355 aa3.12□□□□□ -1.91
SLD5YDR489W BNA5Q05979 453 aa3.12□□□□□ -1.91
SLD5YDR489W CDC45Q08032 650 aa3.12□□□□□ -1.91
SLD5YDR489W RIM20Q12033 661 aa3.12□□□□□ -1.91
SLD5YDR489W RRD2Q12461 358 aa3.12□□□□□ -1.91
SLD5YDR489W COR1P07256 457 aa3.11□□□□□ -1.91
SLD5YDR489W GLN3P18494 730 aa3.11□□□□□ -1.91
SLD5YDR489W RPN2P32565 945 aaKnown RBP3.11□□□□□ -1.91
SLD5YDR489W RAD24P32641 659 aa3.11□□□□□ -1.91
SLD5YDR489W MPE1P35728 441 aaKnown RBP3.11□□□□□ -1.91
SLD5YDR489W DUG2P38149 878 aa3.11□□□□□ -1.91
SLD5YDR489W TCM62P38228 572 aaKnown RBP3.11□□□□□ -1.91
SLD5YDR489W YTA12P40341 825 aa3.11□□□□□ -1.91
SLD5YDR489W AXL1P40851 1208 aa3.11□□□□□ -1.91
SLD5YDR489W DUG3P53871 357 aa3.11□□□□□ -1.91
SLD5YDR489W RPA49Q01080 415 aaPredicted RBP3.11□□□□□ -1.91
SLD5YDR489W RPM2Q02773 1202 aa3.11□□□□□ -1.91
SLD5YDR489W SHR3Q02774 210 aa3.11□□□□□ -1.91
SLD5YDR489W YDR239CQ03780 787 aa3.11□□□□□ -1.91
SLD5YDR489W SYF1Q04048 859 aaPredicted RBP3.11□□□□□ -1.91
SLD5YDR489W RBA50Q04418 439 aa3.11□□□□□ -1.91
SLD5YDR489W FMP42Q04991 504 aa3.11□□□□□ -1.91
SLD5YDR489W RBS1Q05672 457 aaKnown RBP3.11□□□□□ -1.91
SLD5YDR489W HCR1Q05775 265 aaKnown RBP3.11□□□□□ -1.91
SLD5YDR489W YDL057WQ07379 328 aa3.11□□□□□ -1.91
SLD5YDR489W THP1Q08231 455 aa3.11□□□□□ -1.91
SLD5YDR489W RPL31BP0C2H9 113 aaKnown RBP3.1□□□□□ -1.91
SLD5YDR489W YCR007CP25354 239 aa3.1□□□□□ -1.91
SLD5YDR489W PPZ1P26570 692 aa3.1□□□□□ -1.91
SLD5YDR489W YME1P32795 747 aa3.1□□□□□ -1.91
SLD5YDR489W PMT1P33775 817 aa3.1□□□□□ -1.91
SLD5YDR489W MIC60P36112 540 aa3.1□□□□□ -1.91
SLD5YDR489W CSM2P40465 213 aa3.1□□□□□ -1.91
SLD5YDR489W AZF1P41696 914 aa3.1□□□□□ -1.91
SLD5YDR489W HXT14P42833 540 aa3.1□□□□□ -1.91
SLD5YDR489W SAM50P53969 484 aa3.1□□□□□ -1.91
SLD5YDR489W PDS5Q04264 1277 aa3.1□□□□□ -1.91
SLD5YDR489W FMP45Q07651 309 aa3.1□□□□□ -1.91
SLD5YDR489W KEL3Q08979 651 aaPredicted RBP3.1□□□□□ -1.91
SLD5YDR489W SFI1Q12369 946 aa3.1□□□□□ -1.91
SLD5YDR489W PDH1Q12428 516 aaKnown RBP3.1□□□□□ -1.91
SLD5YDR489W MRS3P10566 314 aa3.09□□□□□ -1.91
SLD5YDR489W PAP1P29468 568 aaKnown RBP3.09□□□□□ -1.91
SLD5YDR489W ATP11P32453 318 aa3.09□□□□□ -1.91
SLD5YDR489W BNA4P38169 460 aa3.09□□□□□ -1.91
SLD5YDR489W MBB1P39534 108 aa3.09□□□□□ -1.91
SLD5YDR489W SCD6P45978 349 aaKnown RBP RIP-Chip data3.09□□□□□ -1.91not detected
SLD5YDR489W CUL3P53202 744 aa3.09□□□□□ -1.91
SLD5YDR489W CAF130P53280 1122 aaPredicted RBP3.09□□□□□ -1.91
SLD5YDR489W LSC1P53598 329 aaKnown RBP3.09□□□□□ -1.91
SLD5YDR489W TDA7P53882 636 aaPredicted RBP3.09□□□□□ -1.91
SLD5YDR489W SLD5Q03406 294 aa3.09□□□□□ -1.91
SLD5YDR489W YDR131CQ03899 556 aa3.09□□□□□ -1.91
SLD5YDR489W ISN1Q99312 450 aa3.09□□□□□ -1.91
SLD5YDR489W APE1P14904 514 aa3.08□□□□□ -1.92
SLD5YDR489W HXT3P32466 567 aaKnown RBP3.08□□□□□ -1.92
SLD5YDR489W VPS17P32913 551 aa3.08□□□□□ -1.92
SLD5YDR489W OSH3P38713 996 aaKnown RBP3.08□□□□□ -1.92
SLD5YDR489W VTC2P43585 828 aa3.08□□□□□ -1.92
SLD5YDR489W YGL108CP53139 140 aa3.08□□□□□ -1.92
SLD5YDR489W KTR5P53966 522 aaPredicted RBP3.08□□□□□ -1.92
SLD5YDR489W SPC19Q03954 165 aa3.08□□□□□ -1.92
SLD5YDR489W RAV1P47104 1357 aa3.08□□□□□ -1.92
SLD5YDR489W RPC53P25441 422 aa3.07□□□□□ -1.92
SLD5YDR489W UTR4P32626 227 aa3.07□□□□□ -1.92
SLD5YDR489W LOS1P33418 1100 aaPredicted RBP3.07□□□□□ -1.92
SLD5YDR489W MFT1P33441 392 aaKnown RBP3.07□□□□□ -1.92
SLD5YDR489W SAS3P34218 831 aa3.07□□□□□ -1.92
SLD5YDR489W RIM2P38127 377 aa3.07□□□□□ -1.92
SLD5YDR489W VPS52P39904 641 aa3.07□□□□□ -1.92
SLD5YDR489W DIM1P41819 318 aaKnown RBP3.07□□□□□ -1.92
SLD5YDR489W DLD2P46681 530 aaKnown RBP3.07□□□□□ -1.92
SLD5YDR489W YMR155WQ03795 547 aa3.07□□□□□ -1.92
SLD5YDR489W PHO92Q06390 306 aa3.07□□□□□ -1.92
SLD5YDR489W SYO1Q07395 620 aa3.07□□□□□ -1.92
SLD5YDR489W CFT2Q12102 859 aaPredicted RBP3.07□□□□□ -1.92
SLD5YDR489W CSR2Q12734 1121 aa3.07□□□□□ -1.92
SLD5YDR489W SPB1P25582 841 aaPredicted RBP3.06□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 20.9 ms