RNA–Protein interactions for RNA: YDR261W-A

YDR261W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YDR261W-A, Length 1,317 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR261W-AYDR261W-A HSH49Q99181 213 aaPredicted RBP3.47□□□□□ -1.85
YDR261W-AYDR261W-A CBS2P14905 389 aa3.46□□□□□ -1.85
YDR261W-AYDR261W-A PAH1P32567 862 aa3.46□□□□□ -1.85
YDR261W-AYDR261W-A FRE1P32791 686 aa3.46□□□□□ -1.85
YDR261W-AYDR261W-A TIF3P34167 436 aaKnown RBP3.46□□□□□ -1.85
YDR261W-AYDR261W-A SHP1P34223 423 aa3.46□□□□□ -1.85
YDR261W-AYDR261W-A ALK1P43633 760 aaKnown RBP3.46□□□□□ -1.85
YDR261W-AYDR261W-A YJL132WP47014 750 aa3.46□□□□□ -1.85
YDR261W-AYDR261W-A DRN1P53255 507 aaKnown RBP3.46□□□□□ -1.85
YDR261W-AYDR261W-A TOF2Q02208 771 aa3.46□□□□□ -1.85
YDR261W-AYDR261W-A SLD5Q03406 294 aa3.46□□□□□ -1.85
YDR261W-AYDR261W-A THP1Q08231 455 aa3.46□□□□□ -1.85
YDR261W-AYDR261W-A YOR365CQ08844 703 aa3.46□□□□□ -1.85
YDR261W-AYDR261W-A NMD4Q12129 218 aa3.46□□□□□ -1.85
YDR261W-AYDR261W-A YPT6Q99260 215 aa3.46□□□□□ -1.85
YDR261W-AYDR261W-A RAD52P06778 471 aaKnown RBP3.45□□□□□ -1.86
YDR261W-AYDR261W-A PEP4P07267 405 aaKnown RBP3.45□□□□□ -1.86
YDR261W-AYDR261W-A EXO70P19658 623 aa3.45□□□□□ -1.86
YDR261W-AYDR261W-A PEP3P27801 918 aa3.45□□□□□ -1.86
YDR261W-AYDR261W-A PAP1P29468 568 aaKnown RBP3.45□□□□□ -1.86
YDR261W-AYDR261W-A SHO1P40073 367 aa3.45□□□□□ -1.86
YDR261W-AYDR261W-A IRC15Q02733 499 aa3.45□□□□□ -1.86
YDR261W-AYDR261W-A YDR056CQ12025 205 aa3.45□□□□□ -1.86
YDR261W-AYDR261W-A RCN2Q12044 265 aa3.45□□□□□ -1.86
YDR261W-AYDR261W-A YLL056CQ12177 298 aa3.45□□□□□ -1.86
YDR261W-AYDR261W-A LSP1Q12230 341 aaKnown RBP3.45□□□□□ -1.86
YDR261W-AYDR261W-A SEM1O94742 89 aa3.44□□□□□ -1.86
YDR261W-AYDR261W-A HEM2P05373 342 aa3.44□□□□□ -1.86
YDR261W-AYDR261W-A SAN1P22470 610 aa3.44□□□□□ -1.86
YDR261W-AYDR261W-A YCR007CP25354 239 aa3.44□□□□□ -1.86
YDR261W-AYDR261W-A GFD2P25370 566 aaKnown RBP3.44□□□□□ -1.86
YDR261W-AYDR261W-A NOP4P37838 685 aaKnown RBP3.44□□□□□ -1.86
YDR261W-AYDR261W-A REG2P38232 338 aa3.44□□□□□ -1.86
YDR261W-AYDR261W-A PCA1P38360 1216 aa3.44□□□□□ -1.86
YDR261W-AYDR261W-A TIF5P38431 405 aaKnown RBP3.44□□□□□ -1.86
YDR261W-AYDR261W-A MSR1P38714 643 aa3.44□□□□□ -1.86
YDR261W-AYDR261W-A CCT6P39079 546 aa3.44□□□□□ -1.86
YDR261W-AYDR261W-A NOP16P40007 231 aaKnown RBP3.44□□□□□ -1.86
YDR261W-AYDR261W-A TMA108P40462 946 aa3.44□□□□□ -1.86
YDR261W-AYDR261W-A IMD4P50094 524 aaKnown RBP3.44□□□□□ -1.86
YDR261W-AYDR261W-A BNA5Q05979 453 aa3.44□□□□□ -1.86
YDR261W-AYDR261W-A VPS74Q06385 345 aa3.44□□□□□ -1.86
YDR261W-AYDR261W-A AAC3P18238 307 aa3.44□□□□□ -1.86
YDR261W-AYDR261W-A UTR4P32626 227 aa3.44□□□□□ -1.86
YDR261W-AYDR261W-A PMU1P36069 295 aa3.44□□□□□ -1.86
YDR261W-AYDR261W-A TUL1P36096 758 aa3.44□□□□□ -1.86
YDR261W-AYDR261W-A BNA4P38169 460 aa3.44□□□□□ -1.86
YDR261W-AYDR261W-A ALG8P40351 577 aa3.44□□□□□ -1.86
YDR261W-AYDR261W-A ELP2P42935 788 aa3.44□□□□□ -1.86
YDR261W-AYDR261W-A YGR066CP53242 292 aa3.44□□□□□ -1.86
YDR261W-AYDR261W-A COQ9Q05779 260 aa3.44□□□□□ -1.86
YDR261W-AYDR261W-A YJR112W-AQ3E743 109 aa3.44□□□□□ -1.86
YDR261W-AYDR261W-A ATR1P13090 542 aa3.43□□□□□ -1.86
YDR261W-AYDR261W-A YME1P32795 747 aa3.43□□□□□ -1.86
YDR261W-AYDR261W-A TCD2P36101 447 aaKnown RBP3.43□□□□□ -1.86
YDR261W-AYDR261W-A DUG2P38149 878 aa3.43□□□□□ -1.86
YDR261W-AYDR261W-A SPG5P42933 373 aa3.43□□□□□ -1.86
YDR261W-AYDR261W-A GPI1P53306 609 aa3.43□□□□□ -1.86
YDR261W-AYDR261W-A VPS38Q05919 439 aa3.43□□□□□ -1.86
YDR261W-AYDR261W-A PHO92Q06390 306 aa3.43□□□□□ -1.86
YDR261W-AYDR261W-A CTI6Q08923 506 aa3.43□□□□□ -1.86
YDR261W-AYDR261W-A SUC2P00724 532 aa3.42□□□□□ -1.86
YDR261W-AYDR261W-A TCM62P38228 572 aaKnown RBP3.42□□□□□ -1.86
YDR261W-AYDR261W-A TIF4631P39935 952 aaKnown RBP3.42□□□□□ -1.86
YDR261W-AYDR261W-A IDP2P41939 412 aa3.42□□□□□ -1.86
YDR261W-AYDR261W-A YPI1P43587 155 aa3.42□□□□□ -1.86
YDR261W-AYDR261W-A ZPR1P53303 486 aaKnown RBP3.42□□□□□ -1.86
YDR261W-AYDR261W-A RLM1Q12224 676 aa3.42□□□□□ -1.86
YDR261W-AYDR261W-A AVL9Q12500 764 aa3.42□□□□□ -1.86
YDR261W-AYDR261W-A BRR1Q99177 341 aaPredicted RBP3.42□□□□□ -1.86
YDR261W-AYDR261W-A GAL80P04387 435 aa3.41□□□□□ -1.86
YDR261W-AYDR261W-A CBS1P14066 229 aa3.41□□□□□ -1.86
YDR261W-AYDR261W-A MSN2P33748 704 aa3.41□□□□□ -1.86
YDR261W-AYDR261W-A SGN1P40561 250 aaKnown RBP RIP-Chip data3.41□□□□□ -1.86not detected
YDR261W-AYDR261W-A MRX6P48564 524 aa3.41□□□□□ -1.86
YDR261W-AYDR261W-A WSC2P53832 503 aa3.41□□□□□ -1.86
YDR261W-AYDR261W-A FIN1Q03898 291 aa3.41□□□□□ -1.86
YDR261W-AYDR261W-A RPC11Q04307 110 aaPredicted RBP3.41□□□□□ -1.86
YDR261W-AYDR261W-A HSC82P15108 705 aaKnown RBP3.4□□□□□ -1.87
YDR261W-AYDR261W-A AIM22P47051 409 aa3.4□□□□□ -1.87
YDR261W-AYDR261W-A UPF3P48412 387 aaKnown RBP3.4□□□□□ -1.87
YDR261W-AYDR261W-A HEF3P53978 1044 aaKnown RBP3.4□□□□□ -1.87
YDR261W-AYDR261W-A SMA2Q04658 369 aa3.4□□□□□ -1.87
YDR261W-AYDR261W-A RBS1Q05672 457 aaKnown RBP3.4□□□□□ -1.87
YDR261W-AYDR261W-A COR1P07256 457 aa3.39□□□□□ -1.87
YDR261W-AYDR261W-A PRP2P20095 876 aaPredicted RBP3.39□□□□□ -1.87
YDR261W-AYDR261W-A ELO2P25358 347 aa3.39□□□□□ -1.87
YDR261W-AYDR261W-A PUT3P25502 979 aaPredicted RBP3.39□□□□□ -1.87
YDR261W-AYDR261W-A RSM22P36056 628 aa3.39□□□□□ -1.87
YDR261W-AYDR261W-A HAT2P39984 401 aa3.39□□□□□ -1.87
YDR261W-AYDR261W-A RMD8P43620 662 aa3.39□□□□□ -1.87
YDR261W-AYDR261W-A GWT1P47026 490 aa3.39□□□□□ -1.87
YDR261W-AYDR261W-A CFT2Q12102 859 aaPredicted RBP3.39□□□□□ -1.87
YDR261W-AYDR261W-A CTF3Q12748 733 aa3.39□□□□□ -1.87
YDR261W-AYDR261W-A YCL021W-AQ96VH3 125 aa3.39□□□□□ -1.87
YDR261W-AYDR261W-A RAV1P47104 1357 aa3.38□□□□□ -1.87
YDR261W-AYDR261W-A FOB1O13329 566 aa3.38□□□□□ -1.87
YDR261W-AYDR261W-A MES1P00958 751 aaKnown RBP3.38□□□□□ -1.87
YDR261W-AYDR261W-A DFR1P07807 211 aaKnown RBP RIP-Chip data3.38□□□□□ -1.87not detected
YDR261W-AYDR261W-A PMR1P13586 950 aa3.38□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 17.9 ms