RNA–Protein interactions for RNA: YDR139C

RUB1, Transcript of Ubiquitin-like protein with similarity to mammalian NEDD8, yeastyeast

Gene RUB1, Length 234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RUB1YDR139C WBP1P33767 430 aaKnown RBP3.55□□□□□ -1.84
RUB1YDR139C OSH3P38713 996 aaKnown RBP3.55□□□□□ -1.84
RUB1YDR139C NAB3P38996 802 aaKnown RBP RIP-Chip data3.55□□□□□ -1.84not detected
RUB1YDR139C CCT4P39078 528 aaKnown RBP3.55□□□□□ -1.84
RUB1YDR139C NPR2P39923 615 aa3.55□□□□□ -1.84
RUB1YDR139C DRN1P53255 507 aaKnown RBP3.55□□□□□ -1.84
RUB1YDR139C RPM2Q02773 1202 aa3.55□□□□□ -1.84
RUB1YDR139C RPC11Q04307 110 aaPredicted RBP3.55□□□□□ -1.84
RUB1YDR139C HCR1Q05775 265 aaKnown RBP3.55□□□□□ -1.84
RUB1YDR139C FOB1O13329 566 aa3.54□□□□□ -1.84
RUB1YDR139C MRS3P10566 314 aa3.54□□□□□ -1.84
RUB1YDR139C MRP7P12687 371 aa3.54□□□□□ -1.84
RUB1YDR139C MTF1P14908 341 aaKnown RBP3.54□□□□□ -1.84
RUB1YDR139C PRP2P20095 876 aaPredicted RBP3.54□□□□□ -1.84
RUB1YDR139C YCR007CP25354 239 aa3.54□□□□□ -1.84
RUB1YDR139C ELO2P25358 347 aa3.54□□□□□ -1.84
RUB1YDR139C PTR2P32901 601 aa3.54□□□□□ -1.84
RUB1YDR139C SIP2P34164 415 aaKnown RBP3.54□□□□□ -1.84
RUB1YDR139C BNA4P38169 460 aa3.54□□□□□ -1.84
RUB1YDR139C VPS52P39904 641 aa3.54□□□□□ -1.84
RUB1YDR139C TIF4631P39935 952 aaKnown RBP3.54□□□□□ -1.84
RUB1YDR139C DOT5P40553 215 aa3.54□□□□□ -1.84
RUB1YDR139C MET28P40573 187 aa3.54□□□□□ -1.84
RUB1YDR139C SCD6P45978 349 aaKnown RBP RIP-Chip data3.54□□□□□ -1.84not detected
RUB1YDR139C AIM22P47051 409 aa3.54□□□□□ -1.84
RUB1YDR139C TIM10P87108 93 aa3.54□□□□□ -1.84
RUB1YDR139C IVY1Q04934 453 aa3.54□□□□□ -1.84
RUB1YDR139C YMR230W-AQ3E7B5 62 aa3.54□□□□□ -1.84
RUB1YDR139C AMD1P15274 810 aaKnown RBP3.53□□□□□ -1.84
RUB1YDR139C NDC1P32500 655 aa3.53□□□□□ -1.84
RUB1YDR139C MRE11P32829 692 aa3.53□□□□□ -1.84
RUB1YDR139C DUG2P38149 878 aa3.53□□□□□ -1.84
RUB1YDR139C TCM62P38228 572 aaKnown RBP3.53□□□□□ -1.84
RUB1YDR139C MUM2P38236 366 aa3.53□□□□□ -1.84
RUB1YDR139C MDM31P38880 579 aa3.53□□□□□ -1.84
RUB1YDR139C DHH1P39517 506 aaKnown RBP3.53□□□□□ -1.84
RUB1YDR139C YEL057CP39983 233 aa3.53□□□□□ -1.84
RUB1YDR139C SPO22P40511 975 aa3.53□□□□□ -1.84
RUB1YDR139C ARF3P40994 183 aaRIP-Chip data3.53□□□□□ -1.84not detected
RUB1YDR139C RTT101P47050 842 aa3.53□□□□□ -1.84
RUB1YDR139C PET130P47065 347 aa3.53□□□□□ -1.84
RUB1YDR139C HEF3P53978 1044 aaKnown RBP3.53□□□□□ -1.84
RUB1YDR139C SLD5Q03406 294 aa3.53□□□□□ -1.84
RUB1YDR139C YDR239CQ03780 787 aa3.53□□□□□ -1.84
RUB1YDR139C PPT2Q12036 173 aa3.53□□□□□ -1.84
RUB1YDR139C YDL009CQ12210 107 aa3.53□□□□□ -1.84
RUB1YDR139C LSP1Q12230 341 aaKnown RBP3.53□□□□□ -1.84
RUB1YDR139C SUC2P00724 532 aa3.52□□□□□ -1.85
RUB1YDR139C UTR4P32626 227 aa3.52□□□□□ -1.85
RUB1YDR139C CST26P38226 397 aa3.52□□□□□ -1.85
RUB1YDR139C UTP9P38882 575 aaKnown RBP3.52□□□□□ -1.85
RUB1YDR139C RTT103Q05543 409 aa3.52□□□□□ -1.85
RUB1YDR139C BNA5Q05979 453 aa3.52□□□□□ -1.85
RUB1YDR139C YTH1Q06102 208 aaPredicted RBP3.52□□□□□ -1.85
RUB1YDR139C SYO1Q07395 620 aa3.52□□□□□ -1.85
RUB1YDR139C SEC39Q12745 709 aa3.52□□□□□ -1.85
RUB1YDR139C BRR1Q99177 341 aaPredicted RBP3.52□□□□□ -1.85
RUB1YDR139C ARG3P05150 338 aa3.51□□□□□ -1.85
RUB1YDR139C RPL15AP05748 204 aaKnown RBP3.51□□□□□ -1.85
RUB1YDR139C COR1P07256 457 aa3.51□□□□□ -1.85
RUB1YDR139C EXO70P19658 623 aa3.51□□□□□ -1.85
RUB1YDR139C FRE1P32791 686 aa3.51□□□□□ -1.85
RUB1YDR139C MSN2P33748 704 aa3.51□□□□□ -1.85
RUB1YDR139C ROK1P45818 564 aaPredicted RBP3.51□□□□□ -1.85
RUB1YDR139C CAF130P53280 1122 aaPredicted RBP3.51□□□□□ -1.85
RUB1YDR139C ZPR1P53303 486 aaKnown RBP3.51□□□□□ -1.85
RUB1YDR139C GPI1P53306 609 aa3.51□□□□□ -1.85
RUB1YDR139C RLI1Q03195 608 aaKnown RBP3.51□□□□□ -1.85
RUB1YDR139C ERP1Q05359 219 aaKnown RBP3.51□□□□□ -1.85
RUB1YDR139C MRPL51Q06090 140 aaPredicted RBP3.51□□□□□ -1.85
RUB1YDR139C TSR2Q06672 205 aaKnown RBP3.51□□□□□ -1.85
RUB1YDR139C YBR298C-AQ8TGK4 73 aa3.51□□□□□ -1.85
RUB1YDR139C RAV1P47104 1357 aa3.51□□□□□ -1.85
RUB1YDR139C SPC110P32380 944 aa3.5□□□□□ -1.85
RUB1YDR139C RPN12P32496 274 aa3.5□□□□□ -1.85
RUB1YDR139C MBB1P39534 108 aa3.5□□□□□ -1.85
RUB1YDR139C ERP2P39704 215 aa3.5□□□□□ -1.85
RUB1YDR139C RPH1P39956 796 aa3.5□□□□□ -1.85
RUB1YDR139C TWF1P53250 332 aa3.5□□□□□ -1.85
RUB1YDR139C IRC15Q02733 499 aa3.5□□□□□ -1.85
RUB1YDR139C VPS72Q03388 795 aa3.5□□□□□ -1.85
RUB1YDR139C PDS5Q04264 1277 aa3.5□□□□□ -1.85
RUB1YDR139C COG4Q06096 861 aa3.5□□□□□ -1.85
RUB1YDR139C VPS74Q06385 345 aa3.5□□□□□ -1.85
RUB1YDR139C PHO92Q06390 306 aa3.5□□□□□ -1.85
RUB1YDR139C SET6Q12529 373 aa3.5□□□□□ -1.85
RUB1YDR139C YDL007C-AQ2V2Q0 85 aa3.5□□□□□ -1.85
RUB1YDR139C CYB2P00175 591 aa3.49□□□□□ -1.85
RUB1YDR139C RPL31BP0C2H9 113 aaKnown RBP3.49□□□□□ -1.85
RUB1YDR139C BUD14P27637 709 aa3.49□□□□□ -1.85
RUB1YDR139C RGT1P32862 1170 aa3.49□□□□□ -1.85
RUB1YDR139C VID24P38263 362 aa3.49□□□□□ -1.85
RUB1YDR139C NDE1P40215 560 aa3.49□□□□□ -1.85
RUB1YDR139C ESL1P40456 1118 aa3.49□□□□□ -1.85
RUB1YDR139C YJL213WP40896 331 aa3.49□□□□□ -1.85
RUB1YDR139C YFR016CP43597 1233 aaKnown RBP3.49□□□□□ -1.85
RUB1YDR139C IRC6P43615 237 aa3.49□□□□□ -1.85
RUB1YDR139C RBS1Q05672 457 aaKnown RBP3.49□□□□□ -1.85
RUB1YDR139C MRD1Q06106 887 aaKnown RBP3.49□□□□□ -1.85
RUB1YDR139C RIM20Q12033 661 aa3.49□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 19 ms