RNA–Protein interactions for RNA: YDR052C

DBF4, Transcript of Regulatory subunit of Cdc7p-Dbf4p kinase complex, yeast

Gene DBF4, Length 2,115 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBF4	YDR052C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	5.14	□□□□□ -1.59	not detected
DBF4	YDR052C	CWC24	P53769	259 aa		5.14	□□□□□ -1.59
DBF4	YDR052C	YAF9	P53930	226 aa		5.14	□□□□□ -1.59
DBF4	YDR052C	STP1	Q00947	519 aa		5.14	□□□□□ -1.59
DBF4	YDR052C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	5.14	□□□□□ -1.59	not detected
DBF4	YDR052C	TY1A-DR1	Q03856	440 aa		5.14	□□□□□ -1.59
DBF4	YDR052C	TY1A-ML1	Q04706	440 aa	Known RBP	5.14	□□□□□ -1.59
DBF4	YDR052C	HBT1	Q07653	1046 aa	Known RBP	5.14	□□□□□ -1.59
DBF4	YDR052C	RCL1	Q08096	367 aa	Predicted RBP	5.14	□□□□□ -1.59
DBF4	YDR052C	SMF3	Q12078	473 aa	Predicted RBP	5.14	□□□□□ -1.59
DBF4	YDR052C	TY1A-BR	Q12217	440 aa		5.14	□□□□□ -1.59
DBF4	YDR052C	HRT3	Q12347	344 aa		5.14	□□□□□ -1.59
DBF4	YDR052C	SPE4	Q12455	300 aa		5.14	□□□□□ -1.59
DBF4	YDR052C	TY1A-NL2	Q12470	440 aa		5.14	□□□□□ -1.59
DBF4	YDR052C	TY1A-GR2	Q12485	440 aa		5.14	□□□□□ -1.59
DBF4	YDR052C	COB	P00163	385 aa		5.13	□□□□□ -1.59
DBF4	YDR052C	ATP4	P05626	244 aa		5.13	□□□□□ -1.59
DBF4	YDR052C	HIS5	P07172	385 aa		5.13	□□□□□ -1.59
DBF4	YDR052C	MET3	P08536	511 aa		5.13	□□□□□ -1.59
DBF4	YDR052C	RPS24A	P0CX31	135 aa	Known RBP	5.13	□□□□□ -1.59
DBF4	YDR052C	RPS24B	P0CX32	135 aa	Known RBP	5.13	□□□□□ -1.59
DBF4	YDR052C	MATALPHA1	P0CY06	175 aa		5.13	□□□□□ -1.59
DBF4	YDR052C	HMLALPHA1	P0CY07	175 aa		5.13	□□□□□ -1.59
DBF4	YDR052C	RSA4	P25382	515 aa	Known RBP	5.13	□□□□□ -1.59
DBF4	YDR052C	CAP1	P28495	268 aa	Known RBP	5.13	□□□□□ -1.59
DBF4	YDR052C	LDS1	P31379	325 aa		5.13	□□□□□ -1.59
DBF4	YDR052C	NDC1	P32500	655 aa		5.13	□□□□□ -1.59
DBF4	YDR052C	SPR1	P32603	445 aa		5.13	□□□□□ -1.59
DBF4	YDR052C	YBR056W	P38081	501 aa		5.13	□□□□□ -1.59
DBF4	YDR052C	RRT2	P38332	387 aa		5.13	□□□□□ -1.59
DBF4	YDR052C	OSH7	P38755	437 aa		5.13	□□□□□ -1.59
DBF4	YDR052C	YAP1801	P38856	637 aa		5.13	□□□□□ -1.59
DBF4	YDR052C	YEL020C	P39994	560 aa		5.13	□□□□□ -1.59
DBF4	YDR052C	RGI1	P40043	161 aa	Predicted RBP	5.13	□□□□□ -1.59
DBF4	YDR052C	YMR147W	P40218	223 aa	Known RBP	5.13	□□□□□ -1.59
DBF4	YDR052C	CHS6	P40955	746 aa		5.13	□□□□□ -1.59
DBF4	YDR052C	AGP3	P43548	558 aa		5.13	□□□□□ -1.59
DBF4	YDR052C	DOC1	P53068	250 aa		5.13	□□□□□ -1.59
DBF4	YDR052C	MUS81	Q04149	632 aa	Predicted RBP	5.13	□□□□□ -1.59
DBF4	YDR052C	YPR078C	Q06813	372 aa		5.13	□□□□□ -1.59
DBF4	YDR052C	CYK3	Q07533	885 aa		5.13	□□□□□ -1.59
DBF4	YDR052C	DSE3	Q08729	430 aa		5.13	□□□□□ -1.59
DBF4	YDR052C	SLF1	Q12034	447 aa	Known RBP	5.13	□□□□□ -1.59
DBF4	YDR052C	YPR063C	Q12160	140 aa		5.13	□□□□□ -1.59
DBF4	YDR052C	RPN5	Q12250	445 aa	Known RBP	5.13	□□□□□ -1.59
DBF4	YDR052C	RRD2	Q12461	358 aa		5.13	□□□□□ -1.59
DBF4	YDR052C	MED11	Q99278	115 aa		5.13	□□□□□ -1.59
DBF4	YDR052C	FOB1	O13329	566 aa		5.12	□□□□□ -1.59
DBF4	YDR052C	SPS4	P09937	338 aa		5.12	□□□□□ -1.59
DBF4	YDR052C	CAP2	P13517	287 aa		5.12	□□□□□ -1.59
DBF4	YDR052C	DAL81	P21657	970 aa		5.12	□□□□□ -1.59
DBF4	YDR052C	VMA5	P31412	392 aa	Known RBP	5.12	□□□□□ -1.59
DBF4	YDR052C	MUD1	P32605	298 aa	Known RBP	5.12	□□□□□ -1.59
DBF4	YDR052C	SUR1	P33300	382 aa		5.12	□□□□□ -1.59
DBF4	YDR052C	RER2	P35196	286 aa		5.12	□□□□□ -1.59
DBF4	YDR052C	POL12	P38121	705 aa	Predicted RBP	5.12	□□□□□ -1.59
DBF4	YDR052C	PEX32	P38292	413 aa		5.12	□□□□□ -1.59
DBF4	YDR052C	NVJ1	P38881	321 aa		5.12	□□□□□ -1.59
DBF4	YDR052C	RCF2	P53721	224 aa		5.12	□□□□□ -1.59
DBF4	YDR052C	NOG2	P53742	486 aa	Known RBP	5.12	□□□□□ -1.59
DBF4	YDR052C	OCA2	P53949	197 aa		5.12	□□□□□ -1.59
DBF4	YDR052C	RNY1	Q02933	434 aa	Known RBP	5.12	□□□□□ -1.59
DBF4	YDR052C	EAR1	Q03212	550 aa		5.12	□□□□□ -1.59
DBF4	YDR052C	ENT5	Q03769	411 aa	Known RBP	5.12	□□□□□ -1.59
DBF4	YDR052C	SIZ1	Q04195	904 aa		5.12	□□□□□ -1.59
DBF4	YDR052C	CIA1	Q05583	330 aa		5.12	□□□□□ -1.59
DBF4	YDR052C	HDA3	Q06623	655 aa		5.12	□□□□□ -1.59
DBF4	YDR052C	YPR084W	Q06821	456 aa		5.12	□□□□□ -1.59
DBF4	YDR052C	ZEO1	Q08245	113 aa		5.12	□□□□□ -1.59
DBF4	YDR052C	RPN6	Q12377	434 aa		5.12	□□□□□ -1.59
DBF4	YDR052C	YDL206W	Q12424	762 aa		5.12	□□□□□ -1.59
DBF4	YDR052C	ISN1	Q99312	450 aa		5.12	□□□□□ -1.59
DBF4	YDR052C	YBR085C-A	O43137	85 aa		5.12	□□□□□ -1.59
DBF4	YDR052C	PET54	P10834	293 aa		5.12	□□□□□ -1.59
DBF4	YDR052C	PET9	P18239	318 aa	Known RBP	5.12	□□□□□ -1.59
DBF4	YDR052C	GIT1	P25346	518 aa		5.12	□□□□□ -1.59
DBF4	YDR052C	YIM1	P28625	365 aa		5.12	□□□□□ -1.59
DBF4	YDR052C	RNP1	P32385	249 aa		5.12	□□□□□ -1.59
DBF4	YDR052C	DPH2	P32461	534 aa		5.12	□□□□□ -1.59
DBF4	YDR052C	NGG1	P32494	702 aa		5.12	□□□□□ -1.59
DBF4	YDR052C	FRE1	P32791	686 aa		5.12	□□□□□ -1.59
DBF4	YDR052C	PTM1	P32857	523 aa		5.12	□□□□□ -1.59
DBF4	YDR052C	MRPL3	P36516	390 aa		5.12	□□□□□ -1.59
DBF4	YDR052C	GPX2	P38143	162 aa		5.12	□□□□□ -1.59
DBF4	YDR052C	HIS2	P38635	335 aa		5.12	□□□□□ -1.59
DBF4	YDR052C	YHR131C	P38835	850 aa		5.12	□□□□□ -1.59
DBF4	YDR052C	MLH1	P38920	769 aa		5.12	□□□□□ -1.59
DBF4	YDR052C	ALG8	P40351	577 aa		5.12	□□□□□ -1.59
DBF4	YDR052C	SLM1	P40485	686 aa		5.12	□□□□□ -1.59
DBF4	YDR052C	CIN5	P40917	295 aa		5.12	□□□□□ -1.59
DBF4	YDR052C	LSB6	P42951	607 aa		5.12	□□□□□ -1.59
DBF4	YDR052C	AIM23	P47015	356 aa		5.12	□□□□□ -1.59
DBF4	YDR052C	PEX8	P53248	589 aa		5.12	□□□□□ -1.59
DBF4	YDR052C	RNH70	P53331	553 aa		5.12	□□□□□ -1.59
DBF4	YDR052C	CPR8	P53728	308 aa		5.12	□□□□□ -1.59
DBF4	YDR052C	DPB4	Q04603	196 aa	Known RBP	5.12	□□□□□ -1.59
DBF4	YDR052C	CHS1	P08004	1131 aa		5.11	□□□□□ -1.59
DBF4	YDR052C	TY1A-LR4	P0C2I8	440 aa	Known RBP	5.11	□□□□□ -1.59
DBF4	YDR052C	TY1A-DR6	P0CX70	440 aa		5.11	□□□□□ -1.59
DBF4	YDR052C	TY1A-ER1	P0CX71	440 aa		5.11	□□□□□ -1.59

Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms