RNA–Protein interactions for RNA: YDL140C

RPO21, Transcript of RNA polymerase II largest subunit B220, yeastyeast

Gene RPO21, Length 5,202 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPO21YDL140C YRO2P38079 344 aa3.72□□□□□ -1.81
RPO21YDL140C DAS1P47005 663 aa3.72□□□□□ -1.81
RPO21YDL140C PEX8P53248 589 aa3.72□□□□□ -1.81
RPO21YDL140C YDL057WQ07379 328 aa3.72□□□□□ -1.81
RPO21YDL140C VAM6Q07468 1049 aa3.72□□□□□ -1.81
RPO21YDL140C COS2P0CX12 379 aa3.72□□□□□ -1.81
RPO21YDL140C COS3P0CX13 379 aa3.72□□□□□ -1.81
RPO21YDL140C HRR25P29295 494 aaKnown RBP3.72□□□□□ -1.81
RPO21YDL140C AFG1P32317 509 aa3.72□□□□□ -1.81
RPO21YDL140C SIP2P34164 415 aaKnown RBP3.72□□□□□ -1.81
RPO21YDL140C MRPL10P36520 322 aa3.72□□□□□ -1.81
RPO21YDL140C CTF8P38877 133 aa3.72□□□□□ -1.81
RPO21YDL140C ERV46P39727 415 aa3.72□□□□□ -1.81
RPO21YDL140C DLD3P39976 496 aaKnown RBP3.72□□□□□ -1.81
RPO21YDL140C SHO1P40073 367 aa3.72□□□□□ -1.81
RPO21YDL140C COS4P43542 379 aa3.72□□□□□ -1.81
RPO21YDL140C PMT4P46971 762 aa3.72□□□□□ -1.81
RPO21YDL140C VHS1Q03785 461 aa3.72□□□□□ -1.81
RPO21YDL140C HMO1Q03973 246 aaKnown RBP3.72□□□□□ -1.81
RPO21YDL140C YKU80Q04437 629 aa3.72□□□□□ -1.81
RPO21YDL140C UAF30Q08747 228 aa3.72□□□□□ -1.81
RPO21YDL140C FCF2Q12035 217 aaPredicted RBP3.72□□□□□ -1.81
RPO21YDL140C SKM1Q12469 655 aa3.72□□□□□ -1.81
RPO21YDL140C HAA1Q12753 694 aaKnown RBP3.72□□□□□ -1.81
RPO21YDL140C DNF3Q12674 1656 aa3.71□□□□□ -1.81
RPO21YDL140C AMN1P38285 549 aaPredicted RBP3.71□□□□□ -1.81
RPO21YDL140C LYS1P38998 373 aaRIP-Chip data3.71□□□□□ -1.81not detected
RPO21YDL140C YIR014WP40570 242 aa3.71□□□□□ -1.81
RPO21YDL140C TAH11P47112 604 aa3.71□□□□□ -1.81
RPO21YDL140C CDC73Q06697 393 aa3.71□□□□□ -1.81
RPO21YDL140C YAP7Q08182 245 aa3.71□□□□□ -1.81
RPO21YDL140C YPL216WQ08964 1102 aa3.71□□□□□ -1.81
RPO21YDL140C LDB16P25587 256 aa3.71□□□□□ -1.82
RPO21YDL140C MSS1P32559 526 aaPredicted RBP3.71□□□□□ -1.82
RPO21YDL140C MRP4P32902 394 aa3.71□□□□□ -1.82
RPO21YDL140C SHP1P34223 423 aa3.71□□□□□ -1.82
RPO21YDL140C ARA1P38115 344 aa3.71□□□□□ -1.82
RPO21YDL140C YBR225WP38321 900 aa3.71□□□□□ -1.82
RPO21YDL140C MNN1P39106 762 aa3.71□□□□□ -1.82
RPO21YDL140C YHC3P47040 408 aa3.71□□□□□ -1.82
RPO21YDL140C COS6P53344 381 aa3.71□□□□□ -1.82
RPO21YDL140C VPS75P53853 264 aa3.71□□□□□ -1.82
RPO21YDL140C PUS9Q12069 462 aa3.71□□□□□ -1.82
RPO21YDL140C YLR108CQ12259 485 aa3.71□□□□□ -1.82
RPO21YDL140C CDC16P09798 840 aa3.71□□□□□ -1.82
RPO21YDL140C AMD1P15274 810 aaKnown RBP3.71□□□□□ -1.82
RPO21YDL140C REC107P21651 314 aa3.71□□□□□ -1.82
RPO21YDL140C PUP1P25043 261 aa3.71□□□□□ -1.82
RPO21YDL140C CHK1P38147 527 aa3.71□□□□□ -1.82
RPO21YDL140C PCI8P40512 444 aa3.71□□□□□ -1.82
RPO21YDL140C GPD2P41911 440 aaKnown RBP3.71□□□□□ -1.82
RPO21YDL140C QRI1P43123 477 aaKnown RBP3.71□□□□□ -1.82
RPO21YDL140C YJL045WP47052 634 aa3.71□□□□□ -1.82
RPO21YDL140C YPL113CQ02961 396 aa3.71□□□□□ -1.82
RPO21YDL140C YML096WQ04489 525 aa3.71□□□□□ -1.82
RPO21YDL140C ATG10Q07879 167 aa3.71□□□□□ -1.82
RPO21YDL140C AKR2Q12013 749 aa3.71□□□□□ -1.82
RPO21YDL140C YBL111CQ3E7Y5 667 aa3.71□□□□□ -1.82
RPO21YDL140C YOR032W-AQ8TGS1 66 aa3.71□□□□□ -1.82
RPO21YDL140C YBL055CP34220 418 aaPredicted RBP3.71□□□□□ -1.82
RPO21YDL140C YJR115WP47152 169 aa3.71□□□□□ -1.82
RPO21YDL140C YNR068CP53754 272 aa3.71□□□□□ -1.82
RPO21YDL140C ECM11Q04110 302 aa3.71□□□□□ -1.82
RPO21YDL140C VTI1Q04338 217 aa3.71□□□□□ -1.82
RPO21YDL140C YPR174CQ06616 221 aaPredicted RBP3.71□□□□□ -1.82
RPO21YDL140C LUC7Q07508 261 aaPredicted RBP3.71□□□□□ -1.82
RPO21YDL140C RFM1Q12192 310 aa3.71□□□□□ -1.82
RPO21YDL140C CAN1P04817 590 aa3.7□□□□□ -1.82
RPO21YDL140C KIN2P13186 1147 aaKnown RBP3.7□□□□□ -1.82
RPO21YDL140C KIN82P25341 720 aa3.7□□□□□ -1.82
RPO21YDL140C RAD51P25454 400 aa3.7□□□□□ -1.82
RPO21YDL140C YIM1P28625 365 aa3.7□□□□□ -1.82
RPO21YDL140C SDS22P36047 338 aa3.7□□□□□ -1.82
RPO21YDL140C YKR078WP36158 585 aaKnown RBP3.7□□□□□ -1.82
RPO21YDL140C SRO77P38163 1010 aa3.7□□□□□ -1.82
RPO21YDL140C YBR062CP38239 180 aa3.7□□□□□ -1.82
RPO21YDL140C SWC5P38326 303 aa3.7□□□□□ -1.82
RPO21YDL140C SEC31P38968 1273 aaKnown RBP3.7□□□□□ -1.82
RPO21YDL140C YER188WP40103 239 aa3.7□□□□□ -1.82
RPO21YDL140C AAD14P42884 376 aa3.7□□□□□ -1.82
RPO21YDL140C TRS85P46944 698 aa3.7□□□□□ -1.82
RPO21YDL140C YJR008WP47085 338 aa3.7□□□□□ -1.82
RPO21YDL140C YGR153WP48238 217 aa3.7□□□□□ -1.82
RPO21YDL140C MNT2P53059 558 aa3.7□□□□□ -1.82
RPO21YDL140C MPS2P53159 387 aa3.7□□□□□ -1.82
RPO21YDL140C NUP116Q02630 1113 aa3.7□□□□□ -1.82
RPO21YDL140C TRE1Q08919 783 aa3.7□□□□□ -1.82
RPO21YDL140C PMR1P13586 950 aa3.7□□□□□ -1.82
RPO21YDL140C CBS1P14066 229 aa3.7□□□□□ -1.82
RPO21YDL140C SCL1P21243 252 aaKnown RBP3.7□□□□□ -1.82
RPO21YDL140C IMG1P25626 169 aa3.7□□□□□ -1.82
RPO21YDL140C RRN3P36070 627 aa3.7□□□□□ -1.82
RPO21YDL140C YIL166CP40445 542 aa3.7□□□□□ -1.82
RPO21YDL140C AVT1P47082 602 aa3.7□□□□□ -1.82
RPO21YDL140C MTC3P53077 123 aa3.7□□□□□ -1.82
RPO21YDL140C MNP1P53163 194 aaPredicted RBP3.7□□□□□ -1.82
RPO21YDL140C RTS3P53289 263 aa3.7□□□□□ -1.82
RPO21YDL140C MTM1P53320 366 aa3.7□□□□□ -1.82
RPO21YDL140C COS1P53822 381 aa3.7□□□□□ -1.82
RPO21YDL140C MDM30Q05930 598 aa3.7□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms