RNA–Protein interactions for RNA: YDL042C

SIR2, Transcript of Conserved NAD+ dependent histone deacetylase of the Sirtuin family, yeast

Gene SIR2, Length 1,689 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIR2	YDL042C	PET130	P47065	347 aa		5.8	□□□□□ -1.48
SIR2	YDL042C	YDR239C	Q03780	787 aa		5.8	□□□□□ -1.48
SIR2	YDL042C	RIM20	Q12033	661 aa		5.8	□□□□□ -1.48
SIR2	YDL042C	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	5.8	□□□□□ -1.48	not detected
SIR2	YDL042C	YSP2	Q06681	1438 aa		5.8	□□□□□ -1.48
SIR2	YDL042C	MET18	P40469	1032 aa		5.79	□□□□□ -1.48
SIR2	YDL042C	EKI1	Q03764	534 aa		5.79	□□□□□ -1.48
SIR2	YDL042C	FUR1	P18562	216 aa	Known RBP	5.79	□□□□□ -1.48
SIR2	YDL042C	GPI10	P30777	616 aa		5.79	□□□□□ -1.48
SIR2	YDL042C	PDR3	P33200	976 aa		5.79	□□□□□ -1.48
SIR2	YDL042C	ASK1	P35734	292 aa		5.79	□□□□□ -1.48
SIR2	YDL042C	CST26	P38226	397 aa		5.79	□□□□□ -1.48
SIR2	YDL042C	VID24	P38263	362 aa		5.79	□□□□□ -1.48
SIR2	YDL042C	MSR1	P38714	643 aa		5.79	□□□□□ -1.48
SIR2	YDL042C	SOL4	P53315	255 aa		5.79	□□□□□ -1.48
SIR2	YDL042C	SCW4	P53334	386 aa	Known RBP	5.79	□□□□□ -1.48
SIR2	YDL042C	DUG3	P53871	357 aa		5.79	□□□□□ -1.48
SIR2	YDL042C	YNL181W	P53878	407 aa		5.79	□□□□□ -1.48
SIR2	YDL042C	RRG1	Q12167	365 aa	Predicted RBP	5.79	□□□□□ -1.48
SIR2	YDL042C	UBX3	Q12229	455 aa		5.79	□□□□□ -1.48
SIR2	YDL042C	GRX6	Q12438	231 aa		5.79	□□□□□ -1.48
SIR2	YDL042C	YME1	P32795	747 aa		5.78	□□□□□ -1.48
SIR2	YDL042C	MRE11	P32829	692 aa		5.78	□□□□□ -1.48
SIR2	YDL042C	YPK3	P38070	525 aa		5.78	□□□□□ -1.48
SIR2	YDL042C	YGR126W	P53274	230 aa		5.78	□□□□□ -1.48
SIR2	YDL042C	JJJ1	P53863	590 aa		5.78	□□□□□ -1.48
SIR2	YDL042C	NUP100	Q02629	959 aa		5.78	□□□□□ -1.48
SIR2	YDL042C	RTN2	Q12443	393 aa		5.78	□□□□□ -1.48
SIR2	YDL042C	CHC1	P22137	1653 aa	Known RBP	5.77	□□□□□ -1.49
SIR2	YDL042C	SUI2	P20459	304 aa	Known RBP	5.77	□□□□□ -1.49
SIR2	YDL042C	PRD1	P25375	712 aa		5.77	□□□□□ -1.49
SIR2	YDL042C	ERG3	P32353	365 aa		5.77	□□□□□ -1.49
SIR2	YDL042C	NPL6	P32832	435 aa		5.77	□□□□□ -1.49
SIR2	YDL042C	PCL6	P40038	420 aa		5.77	□□□□□ -1.49
SIR2	YDL042C	VTC2	P43585	828 aa		5.77	□□□□□ -1.49
SIR2	YDL042C	ESBP6	P53918	673 aa		5.77	□□□□□ -1.49
SIR2	YDL042C	YMR160W	Q03823	816 aa		5.77	□□□□□ -1.49
SIR2	YDL042C	COQ9	Q05779	260 aa		5.77	□□□□□ -1.49
SIR2	YDL042C	MRD1	Q06106	887 aa	Known RBP	5.77	□□□□□ -1.49
SIR2	YDL042C	YDL057W	Q07379	328 aa		5.77	□□□□□ -1.49
SIR2	YDL042C	ATG29	Q12092	213 aa		5.77	□□□□□ -1.49
SIR2	YDL042C	SMF1	P38925	575 aa		5.76	□□□□□ -1.49
SIR2	YDL042C	IAH1	P41734	238 aa		5.76	□□□□□ -1.49
SIR2	YDL042C	SNG1	P46950	547 aa		5.76	□□□□□ -1.49
SIR2	YDL042C	TWF1	P53250	332 aa		5.76	□□□□□ -1.49
SIR2	YDL042C	SMM1	P53720	384 aa	Known RBP	5.76	□□□□□ -1.49
SIR2	YDL042C	TOF2	Q02208	771 aa		5.76	□□□□□ -1.49
SIR2	YDL042C	YVH1	Q02256	364 aa	Known RBP	5.76	□□□□□ -1.49
SIR2	YDL042C	PGA3	Q12746	312 aa	Known RBP	5.76	□□□□□ -1.49
SIR2	YDL042C	SEC7	P11075	2009 aa	Known RBP	5.76	□□□□□ -1.49
SIR2	YDL042C	GID7	P25569	745 aa		5.75	□□□□□ -1.49
SIR2	YDL042C	CMC1	P36064	111 aa		5.75	□□□□□ -1.49
SIR2	YDL042C	GEP3	Q08622	556 aa		5.75	□□□□□ -1.49
SIR2	YDL042C	SNC1	P31109	117 aa		5.75	□□□□□ -1.49
SIR2	YDL042C	YKL023W	P36103	277 aa	Known RBP	5.75	□□□□□ -1.49
SIR2	YDL042C	MUM2	P38236	366 aa		5.75	□□□□□ -1.49
SIR2	YDL042C	LAG1	P38703	411 aa		5.75	□□□□□ -1.49
SIR2	YDL042C	SSK1	Q07084	712 aa		5.75	□□□□□ -1.49
SIR2	YDL042C	AFT2	Q08957	416 aa		5.75	□□□□□ -1.49
SIR2	YDL042C	NCE102	Q12207	173 aa	RIP-Chip data	5.75	□□□□□ -1.49	not detected
SIR2	YDL042C	SEC39	Q12745	709 aa		5.75	□□□□□ -1.49
SIR2	YDL042C	YOR093C	Q12275	1648 aa		5.74	□□□□□ -1.49
SIR2	YDL042C	RTS2	P40962	232 aa		5.74	□□□□□ -1.49
SIR2	YDL042C	STB2	P46679	850 aa		5.74	□□□□□ -1.49
SIR2	YDL042C	MLH2	Q07980	695 aa		5.74	□□□□□ -1.49
SIR2	YDL042C	DSE3	Q08729	430 aa		5.74	□□□□□ -1.49
SIR2	YDL042C	RGT2	Q12300	763 aa		5.74	□□□□□ -1.49
SIR2	YDL042C	SFI1	Q12369	946 aa		5.74	□□□□□ -1.49
SIR2	YDL042C	ELO2	P25358	347 aa		5.73	□□□□□ -1.49
SIR2	YDL042C	MCM4	P30665	933 aa	Known RBP	5.73	□□□□□ -1.49
SIR2	YDL042C	PMT1	P33775	817 aa		5.73	□□□□□ -1.49
SIR2	YDL042C	SHR3	Q02774	210 aa		5.73	□□□□□ -1.49
SIR2	YDL042C	YMR155W	Q03795	547 aa		5.73	□□□□□ -1.49
SIR2	YDL042C	PEP5	P12868	1029 aa		5.72	□□□□□ -1.49
SIR2	YDL042C	ERG7	P38604	731 aa		5.72	□□□□□ -1.49
SIR2	YDL042C	ALK1	P43633	760 aa	Known RBP	5.72	□□□□□ -1.49
SIR2	YDL042C	BET4	Q00618	327 aa		5.72	□□□□□ -1.49
SIR2	YDL042C	YPL014W	Q02606	381 aa		5.72	□□□□□ -1.49
SIR2	YDL042C	PAP1	P29468	568 aa	Known RBP	5.72	□□□□□ -1.49
SIR2	YDL042C	NFU1	P32860	256 aa		5.72	□□□□□ -1.49
SIR2	YDL042C	PHD1	P36093	366 aa		5.72	□□□□□ -1.49
SIR2	YDL042C	YHR210C	P38893	341 aa		5.72	□□□□□ -1.49
SIR2	YDL042C	GPD2	P41911	440 aa	Known RBP	5.72	□□□□□ -1.49
SIR2	YDL042C	PDS5	Q04264	1277 aa		5.72	□□□□□ -1.49
SIR2	YDL042C	YMR254C	Q04838	102 aa		5.72	□□□□□ -1.49
SIR2	YDL042C	RQC1	Q05468	723 aa	Known RBP	5.72	□□□□□ -1.49
SIR2	YDL042C	YDL007C-A	Q2V2Q0	85 aa		5.72	□□□□□ -1.49
SIR2	YDL042C	PEP4	P07267	405 aa	Known RBP	5.71	□□□□□ -1.5
SIR2	YDL042C	YFL068W	P0CX99	160 aa		5.71	□□□□□ -1.5
SIR2	YDL042C	YLL066W-A	P0CY00	160 aa		5.71	□□□□□ -1.5
SIR2	YDL042C	YLL067W-A	P0CY01	160 aa		5.71	□□□□□ -1.5
SIR2	YDL042C	MGR1	P25573	417 aa		5.71	□□□□□ -1.5
SIR2	YDL042C	ATO2	P32907	282 aa		5.71	□□□□□ -1.5
SIR2	YDL042C	SEC66	P33754	206 aa		5.71	□□□□□ -1.5
SIR2	YDL042C	BYE1	P36106	594 aa		5.71	□□□□□ -1.5
SIR2	YDL042C	OTU2	P38747	307 aa	Known RBP	5.71	□□□□□ -1.5
SIR2	YDL042C	YIL152W	P40455	235 aa		5.71	□□□□□ -1.5
SIR2	YDL042C	HXT14	P42833	540 aa		5.71	□□□□□ -1.5
SIR2	YDL042C	FET5	P43561	622 aa		5.71	□□□□□ -1.5
SIR2	YDL042C	CAF130	P53280	1122 aa	Predicted RBP	5.71	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 28.3 ms